RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-215ENST00000565507 PRKAR2BP31323 418 aa16.66■□□□□ 0.26
SCAPER-215ENST00000565507 EID1Q9Y6B2 187 aa16.66■□□□□ 0.26
SCAPER-215ENST00000565507 PPIP5K1Q6PFW1 1433 aa16.66■□□□□ 0.26
SCAPER-215ENST00000565507 IPO8O15397 1037 aaKnown RBP16.66■□□□□ 0.26
SCAPER-215ENST00000565507 BRPF1P55201 1214 aaPredicted RBP16.66■□□□□ 0.26
SCAPER-215ENST00000565507 NME9Q86XW9 330 aa16.66■□□□□ 0.26
SCAPER-215ENST00000565507 AMOTL2Q9Y2J4 779 aa16.66■□□□□ 0.26
SCAPER-215ENST00000565507 BRPF3Q9ULD4 1205 aa16.66■□□□□ 0.26
SCAPER-215ENST00000565507 RIMS1Q86UR5 1692 aaKnown RBP16.65■□□□□ 0.26
SCAPER-215ENST00000565507 PHACTR3Q96KR7 559 aa16.65■□□□□ 0.26
SCAPER-215ENST00000565507 TECPR2O15040 1411 aa16.64■□□□□ 0.25
SCAPER-215ENST00000565507 CPSF1Q10570 1443 aaKnown RBP16.64■□□□□ 0.25
SCAPER-215ENST00000565507 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.63■□□□□ 0.25
SCAPER-215ENST00000565507 THEMISQ8N1K5 641 aaPredicted RBP16.63■□□□□ 0.25
SCAPER-215ENST00000565507 ZNF428Q96B54 188 aa16.63■□□□□ 0.25
SCAPER-215ENST00000565507 ARHGAP23Q9P227 1491 aa16.62■□□□□ 0.25
SCAPER-215ENST00000565507 NFE2L2Q16236 605 aa16.62■□□□□ 0.25
SCAPER-215ENST00000565507 C22orf23Q9BZE7 217 aa16.62■□□□□ 0.25
SCAPER-215ENST00000565507 NUCB1Q02818 461 aa16.62■□□□□ 0.25
SCAPER-215ENST00000565507 CPS1P31327 1500 aa16.61■□□□□ 0.25
SCAPER-215ENST00000565507 VAMP4O75379 141 aa16.61■□□□□ 0.25
SCAPER-215ENST00000565507 HMOX1P09601 288 aa16.61■□□□□ 0.25
SCAPER-215ENST00000565507 IL13P35225 146 aa16.61■□□□□ 0.25
SCAPER-215ENST00000565507 EMILIN1Q9Y6C2 1016 aa16.61■□□□□ 0.25
SCAPER-215ENST00000565507 SLIT1O75093 1534 aa16.61■□□□□ 0.25
SCAPER-215ENST00000565507 MAP2P11137 1827 aaKnown RBP16.61■□□□□ 0.25
SCAPER-215ENST00000565507 KCNA6P17658 529 aa16.61■□□□□ 0.25
SCAPER-215ENST00000565507 CCDC61Q9Y6R9 512 aa16.61■□□□□ 0.25
SCAPER-215ENST00000565507 MFAP1P55081 439 aaKnown RBP16.6■□□□□ 0.25
SCAPER-215ENST00000565507 THUMPD2Q9BTF0 503 aaKnown RBP16.6■□□□□ 0.25
SCAPER-215ENST00000565507 RTN4Q9NQC3 1192 aaKnown RBP16.6■□□□□ 0.25
SCAPER-215ENST00000565507 EDC4Q6P2E9 1401 aaKnown RBP16.6■□□□□ 0.25
SCAPER-215ENST00000565507 PIK3R4Q99570 1358 aa16.59■□□□□ 0.25
SCAPER-215ENST00000565507 ZBTB7BO15156 539 aaPredicted RBP16.59■□□□□ 0.25
SCAPER-215ENST00000565507 ZNF853P0CG23 659 aa16.59■□□□□ 0.25
SCAPER-215ENST00000565507 MRPL50Q8N5N7 158 aaKnown RBP16.59■□□□□ 0.25
SCAPER-215ENST00000565507 TSPYL6Q8N831 410 aa16.59■□□□□ 0.25
SCAPER-215ENST00000565507 ARHGAP45Q92619 1136 aa16.58■□□□□ 0.25
SCAPER-215ENST00000565507 CDK12Q9NYV4 1490 aaPredicted RBP16.58■□□□□ 0.24
SCAPER-215ENST00000565507 AATKQ6ZMQ8 1374 aa16.58■□□□□ 0.24
SCAPER-215ENST00000565507 RRS1Q15050 365 aaKnown RBP16.58■□□□□ 0.24
SCAPER-215ENST00000565507 KNDC1Q76NI1 1749 aa16.58■□□□□ 0.24
SCAPER-215ENST00000565507 PTCH1Q13635 1447 aa16.58■□□□□ 0.24
SCAPER-215ENST00000565507 CEP170BQ9Y4F5 1589 aaPredicted RBP16.57■□□□□ 0.24
SCAPER-215ENST00000565507 SOX12O15370 315 aa16.57■□□□□ 0.24
SCAPER-215ENST00000565507 IFT57Q9NWB7 429 aa16.57■□□□□ 0.24
SCAPER-215ENST00000565507 CHD1LQ86WJ1 897 aa16.57■□□□□ 0.24
SCAPER-215ENST00000565507 TBX22Q9Y458 520 aa16.57■□□□□ 0.24
SCAPER-215ENST00000565507 CALD1Q05682 793 aaKnown RBP16.56■□□□□ 0.24
SCAPER-215ENST00000565507 LNPKQ9C0E8 428 aa16.56■□□□□ 0.24
SCAPER-215ENST00000565507 GNAI1P63096 354 aa16.56■□□□□ 0.24
SCAPER-215ENST00000565507 SIRT1Q96EB6 747 aa16.56■□□□□ 0.24
SCAPER-215ENST00000565507 MBIPQ9NS73 344 aa16.56■□□□□ 0.24
SCAPER-215ENST00000565507 ACEP12821 1306 aa16.55■□□□□ 0.24
SCAPER-215ENST00000565507 ABCC4O15439 1325 aa16.54■□□□□ 0.24
SCAPER-215ENST00000565507 RBM25P49756 843 aaKnown RBP16.54■□□□□ 0.24
SCAPER-215ENST00000565507 SPRYD3Q8NCJ5 442 aa16.53■□□□□ 0.24
SCAPER-215ENST00000565507 SIRT2Q8IXJ6 389 aa16.53■□□□□ 0.24
SCAPER-215ENST00000565507 CFAP44Q96MT7 982 aa16.53■□□□□ 0.24
SCAPER-215ENST00000565507 ELL2O00472 640 aaPredicted RBP16.52■□□□□ 0.24
SCAPER-215ENST00000565507 BMP2KLQ5H9B9 411 aa16.52■□□□□ 0.24
SCAPER-215ENST00000565507 C8orf58Q8NAV2 365 aa16.52■□□□□ 0.23
SCAPER-215ENST00000565507 GCC1Q96CN9 775 aa16.52■□□□□ 0.23
SCAPER-215ENST00000565507 TWISTNBQ3B726 338 aaPredicted RBP16.51■□□□□ 0.23
SCAPER-215ENST00000565507 CHMP4BQ9H444 224 aaKnown RBP16.51■□□□□ 0.23
SCAPER-215ENST00000565507 C1orf115Q9H7X2 142 aa16.51■□□□□ 0.23
SCAPER-215ENST00000565507 ADAMTSL3P82987 1691 aa16.51■□□□□ 0.23
SCAPER-215ENST00000565507 COG3Q96JB2 828 aa16.51■□□□□ 0.23
SCAPER-215ENST00000565507 ZNF692Q9BU19 519 aaPredicted RBP16.51■□□□□ 0.23
SCAPER-215ENST00000565507 MON2Q7Z3U7 1717 aa16.51■□□□□ 0.23
SCAPER-215ENST00000565507 CHMP5Q9NZZ3 219 aa16.5■□□□□ 0.23
SCAPER-215ENST00000565507 DLG5Q8TDM6 1919 aa16.5■□□□□ 0.23
SCAPER-215ENST00000565507 FAM83GA6ND36 823 aa16.5■□□□□ 0.23
SCAPER-215ENST00000565507 MCM4P33991 863 aa16.5■□□□□ 0.23
SCAPER-215ENST00000565507 ANKRD45Q5TZF3 282 aa16.5■□□□□ 0.23
SCAPER-215ENST00000565507 NCOA3Q9Y6Q9 1424 aa16.5■□□□□ 0.23
SCAPER-215ENST00000565507 LMOD3Q0VAK6 560 aa16.49■□□□□ 0.23
SCAPER-215ENST00000565507 ANKLE2Q86XL3 938 aa16.49■□□□□ 0.23
SCAPER-215ENST00000565507 DDIT3P35638 169 aa16.49■□□□□ 0.23
SCAPER-215ENST00000565507 NUTM2GQ5VZR2 741 aa16.49■□□□□ 0.23
SCAPER-215ENST00000565507 TTC21BQ7Z4L5 1316 aa16.48■□□□□ 0.23
SCAPER-215ENST00000565507 RGPD8O14715 1765 aaPredicted RBP16.48■□□□□ 0.23
SCAPER-215ENST00000565507 SNX21Q969T3 373 aa16.48■□□□□ 0.23
SCAPER-215ENST00000565507 HSCBQ8IWL3 235 aa16.48■□□□□ 0.23
SCAPER-215ENST00000565507 DCTN1Q14203 1278 aa16.47■□□□□ 0.23
SCAPER-215ENST00000565507 KIF2CQ99661 725 aa16.47■□□□□ 0.23
SCAPER-215ENST00000565507 AKAP12Q02952 1782 aa16.47■□□□□ 0.23
SCAPER-215ENST00000565507 API5Q9BZZ5 524 aaKnown RBP16.46■□□□□ 0.23
SCAPER-215ENST00000565507 PLEKHG3A1L390 1219 aa16.46■□□□□ 0.22
SCAPER-215ENST00000565507 DIP2AQ14689 1571 aa16.46■□□□□ 0.22
SCAPER-215ENST00000565507 KIF24Q5T7B8 1368 aa16.45■□□□□ 0.22
SCAPER-215ENST00000565507 NGDNQ8NEJ9 315 aaKnown RBP16.45■□□□□ 0.22
SCAPER-215ENST00000565507 XRN1Q8IZH2 1706 aaKnown RBP16.45■□□□□ 0.22
SCAPER-215ENST00000565507 USP6P35125 1406 aa16.44■□□□□ 0.22
SCAPER-215ENST00000565507 NRKQ7Z2Y5 1582 aa16.44■□□□□ 0.22
SCAPER-215ENST00000565507 AEBP1Q8IUX7 1158 aa16.44■□□□□ 0.22
SCAPER-215ENST00000565507 PLEKHG5O94827 1062 aa16.44■□□□□ 0.22
SCAPER-215ENST00000565507 TBC1D9Q6ZT07 1266 aa16.44■□□□□ 0.22
SCAPER-215ENST00000565507 EIF4A2Q14240 407 aaKnown RBP16.43■□□□□ 0.22
SCAPER-215ENST00000565507 TOPAZ1Q8N9V7 1692 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms