RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 NUDT16Q96DE0 195 aaKnown RBP19.34■□□□□ 0.69
HERC2-207ENST00000564734 FRAT2O75474 233 aaPredicted RBP19.33■□□□□ 0.69
HERC2-207ENST00000564734 TXNDC2Q86VQ3 553 aa19.33■□□□□ 0.69
HERC2-207ENST00000564734 VAMP4O75379 141 aa19.33■□□□□ 0.68
HERC2-207ENST00000564734 UPF2Q9HAU5 1272 aaKnown RBP19.32■□□□□ 0.68
HERC2-207ENST00000564734 PIK3R4Q99570 1358 aa19.32■□□□□ 0.68
HERC2-207ENST00000564734 MRPL50Q8N5N7 158 aaKnown RBP19.31■□□□□ 0.68
HERC2-207ENST00000564734 C3P01024 1663 aa19.31■□□□□ 0.68
HERC2-207ENST00000564734 IFT57Q9NWB7 429 aa19.31■□□□□ 0.68
HERC2-207ENST00000564734 CCDC61Q9Y6R9 512 aa19.31■□□□□ 0.68
HERC2-207ENST00000564734 AKAP12Q02952 1782 aa19.31■□□□□ 0.68
HERC2-207ENST00000564734 CALD1Q05682 793 aaKnown RBP19.31■□□□□ 0.68
HERC2-207ENST00000564734 NCKAP5LQ9HCH0 1330 aa19.3■□□□□ 0.68
HERC2-207ENST00000564734 ARHGAP45Q92619 1136 aa19.3■□□□□ 0.68
HERC2-207ENST00000564734 THUMPD2Q9BTF0 503 aaKnown RBP19.3■□□□□ 0.68
HERC2-207ENST00000564734 ANTXR1Q9H6X2 564 aa19.3■□□□□ 0.68
HERC2-207ENST00000564734 PTCH1Q13635 1447 aa19.3■□□□□ 0.68
HERC2-207ENST00000564734 GNAI1P63096 354 aa19.29■□□□□ 0.68
HERC2-207ENST00000564734 NUCB1Q02818 461 aa19.29■□□□□ 0.68
HERC2-207ENST00000564734 KDM4FA0A1W2PPD8 638 aa19.29■□□□□ 0.68
HERC2-207ENST00000564734 TSPYL6Q8N831 410 aa19.29■□□□□ 0.68
HERC2-207ENST00000564734 COG3Q96JB2 828 aa19.28■□□□□ 0.68
HERC2-207ENST00000564734 TBC1D2Q9BYX2 928 aa19.28■□□□□ 0.68
HERC2-207ENST00000564734 PRR36Q9H6K5 1346 aa19.28■□□□□ 0.68
HERC2-207ENST00000564734 ZBTB7BO15156 539 aaPredicted RBP19.28■□□□□ 0.68
HERC2-207ENST00000564734 MBIPQ9NS73 344 aa19.28■□□□□ 0.68
HERC2-207ENST00000564734 HDGFP51858 240 aaKnown RBP19.27■□□□□ 0.67
HERC2-207ENST00000564734 ZNF692Q9BU19 519 aaPredicted RBP19.26■□□□□ 0.67
HERC2-207ENST00000564734 RRS1Q15050 365 aaKnown RBP19.25■□□□□ 0.67
HERC2-207ENST00000564734 TMEM2Q9UHN6 1383 aa19.25■□□□□ 0.67
HERC2-207ENST00000564734 NRKQ7Z2Y5 1582 aa19.25■□□□□ 0.67
HERC2-207ENST00000564734 CFAP44Q96MT7 982 aa19.25■□□□□ 0.67
HERC2-207ENST00000564734 ITSN1Q15811 1721 aa19.25■□□□□ 0.67
HERC2-207ENST00000564734 ROBO2Q9HCK4 1378 aa19.25■□□□□ 0.67
HERC2-207ENST00000564734 ADAMTS13Q76LX8 1427 aa19.24■□□□□ 0.67
HERC2-207ENST00000564734 ABCC4O15439 1325 aa19.24■□□□□ 0.67
HERC2-207ENST00000564734 DLG5Q8TDM6 1919 aa19.24■□□□□ 0.67
HERC2-207ENST00000564734 UBR1Q8IWV7 1749 aa19.24■□□□□ 0.67
HERC2-207ENST00000564734 LMOD3Q0VAK6 560 aa19.24■□□□□ 0.67
HERC2-207ENST00000564734 C22orf23Q9BZE7 217 aa19.23■□□□□ 0.67
HERC2-207ENST00000564734 HSPA2P54652 639 aa19.23■□□□□ 0.67
HERC2-207ENST00000564734 CHD1LQ86WJ1 897 aa19.22■□□□□ 0.67
HERC2-207ENST00000564734 C8orf58Q8NAV2 365 aa19.22■□□□□ 0.67
HERC2-207ENST00000564734 TWISTNBQ3B726 338 aaPredicted RBP19.21■□□□□ 0.67
HERC2-207ENST00000564734 SLKQ9H2G2 1235 aaPredicted RBP19.21■□□□□ 0.67
HERC2-207ENST00000564734 CHMP4BQ9H444 224 aaKnown RBP19.21■□□□□ 0.67
HERC2-207ENST00000564734 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.21■□□□□ 0.67
HERC2-207ENST00000564734 TOPAZ1Q8N9V7 1692 aa19.21■□□□□ 0.67
HERC2-207ENST00000564734 MFAP1P55081 439 aaKnown RBP19.2■□□□□ 0.66
HERC2-207ENST00000564734 FAM83GA6ND36 823 aa19.2■□□□□ 0.66
HERC2-207ENST00000564734 ADAMTSL3P82987 1691 aa19.19■□□□□ 0.66
HERC2-207ENST00000564734 GCC1Q96CN9 775 aa19.19■□□□□ 0.66
HERC2-207ENST00000564734 LNPKQ9C0E8 428 aa19.19■□□□□ 0.66
HERC2-207ENST00000564734 TTC21BQ7Z4L5 1316 aa19.19■□□□□ 0.66
HERC2-207ENST00000564734 SIRT2Q8IXJ6 389 aa19.19■□□□□ 0.66
HERC2-207ENST00000564734 OVOS2A0A0J9YW53 1432 aa19.19■□□□□ 0.66
HERC2-207ENST00000564734 OVOS2Q6IE36 1432 aa19.19■□□□□ 0.66
HERC2-207ENST00000564734 ELL2O00472 640 aaPredicted RBP19.18■□□□□ 0.66
HERC2-207ENST00000564734 PLEKHG3A1L390 1219 aa19.18■□□□□ 0.66
HERC2-207ENST00000564734 EIF4A2Q14240 407 aaKnown RBP19.18■□□□□ 0.66
HERC2-207ENST00000564734 IL27Q8NEV9 243 aa19.18■□□□□ 0.66
HERC2-207ENST00000564734 EID1Q9Y6B2 187 aa19.18■□□□□ 0.66
HERC2-207ENST00000564734 THEMISQ8N1K5 641 aaPredicted RBP19.17■□□□□ 0.66
HERC2-207ENST00000564734 KIF24Q5T7B8 1368 aa19.17■□□□□ 0.66
HERC2-207ENST00000564734 PLEKHG1Q9ULL1 1385 aa19.17■□□□□ 0.66
HERC2-207ENST00000564734 DCTN1Q14203 1278 aa19.16■□□□□ 0.66
HERC2-207ENST00000564734 BMP2KLQ5H9B9 411 aa19.16■□□□□ 0.66
HERC2-207ENST00000564734 SLC26A8Q96RN1 970 aa19.16■□□□□ 0.66
HERC2-207ENST00000564734 RBM25P49756 843 aaKnown RBP19.16■□□□□ 0.66
HERC2-207ENST00000564734 C1orf115Q9H7X2 142 aa19.16■□□□□ 0.66
HERC2-207ENST00000564734 AEBP1Q8IUX7 1158 aa19.16■□□□□ 0.66
HERC2-207ENST00000564734 API5Q9BZZ5 524 aaKnown RBP19.16■□□□□ 0.66
HERC2-207ENST00000564734 ACEP12821 1306 aa19.16■□□□□ 0.66
HERC2-207ENST00000564734 NALCNQ8IZF0 1738 aa19.15■□□□□ 0.66
HERC2-207ENST00000564734 USP31Q70CQ4 1352 aa19.15■□□□□ 0.66
HERC2-207ENST00000564734 USP6P35125 1406 aa19.15■□□□□ 0.66
HERC2-207ENST00000564734 PEAK1Q9H792 1746 aa19.15■□□□□ 0.66
HERC2-207ENST00000564734 RGPD1P0DJD0 1748 aa19.14■□□□□ 0.66
HERC2-207ENST00000564734 LTKP29376 864 aa19.14■□□□□ 0.66
HERC2-207ENST00000564734 SSH2Q76I76 1423 aa19.14■□□□□ 0.66
HERC2-207ENST00000564734 PTPRUQ92729 1446 aa19.14■□□□□ 0.65
HERC2-207ENST00000564734 ANKRD45Q5TZF3 282 aa19.14■□□□□ 0.65
HERC2-207ENST00000564734 SULT6B1Q6IMI4 303 aa19.13■□□□□ 0.65
HERC2-207ENST00000564734 CHL1O00533 1208 aa19.12■□□□□ 0.65
HERC2-207ENST00000564734 RGS12O14924 1447 aa19.11■□□□□ 0.65
HERC2-207ENST00000564734 INTS3Q68E01 1043 aaKnown RBP19.11■□□□□ 0.65
HERC2-207ENST00000564734 BRPF3Q9ULD4 1205 aa19.1■□□□□ 0.65
HERC2-207ENST00000564734 NCOA3Q9Y6Q9 1424 aa19.1■□□□□ 0.65
HERC2-207ENST00000564734 KIAA0232Q92628 1395 aa19.1■□□□□ 0.65
HERC2-207ENST00000564734 SNX21Q969T3 373 aa19.09■□□□□ 0.65
HERC2-207ENST00000564734 HSP90AB2PQ58FF8 381 aa19.09■□□□□ 0.65
HERC2-207ENST00000564734 CRB1P82279 1406 aa19.08■□□□□ 0.65
HERC2-207ENST00000564734 DDIT3P35638 169 aa19.08■□□□□ 0.64
HERC2-207ENST00000564734 CHMP5Q9NZZ3 219 aa19.08■□□□□ 0.64
HERC2-207ENST00000564734 SETD1BQ9UPS6 1966 aaKnown RBP19.08■□□□□ 0.64
HERC2-207ENST00000564734 ANKLE2Q86XL3 938 aa19.07■□□□□ 0.64
HERC2-207ENST00000564734 SPRYD3Q8NCJ5 442 aa19.07■□□□□ 0.64
HERC2-207ENST00000564734 KIF2CQ99661 725 aa19.07■□□□□ 0.64
HERC2-207ENST00000564734 KRT24Q2M2I5 525 aa19.07■□□□□ 0.64
HERC2-207ENST00000564734 DCTPP1Q9H773 170 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms