RNA–Protein interactions for RNA: ENST00000564079.5

TUBGCP4-208, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUBGCP4, Length 6,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-208ENST00000564079 POLD1P28340 1107 aa14.45□□□□□ -0.1
TUBGCP4-208ENST00000564079 CD109Q6YHK3 1445 aa14.45□□□□□ -0.1
TUBGCP4-208ENST00000564079 CCDC73Q6ZRK6 1079 aa14.44□□□□□ -0.1
TUBGCP4-208ENST00000564079 CCDC97Q96F63 343 aaPredicted RBP14.44□□□□□ -0.1
TUBGCP4-208ENST00000564079 ERBINQ96RT1 1412 aa14.44□□□□□ -0.1
TUBGCP4-208ENST00000564079 TTLL5Q6EMB2 1281 aa14.44□□□□□ -0.1
TUBGCP4-208ENST00000564079 NBPF8Q3BBV2 869 aa14.44□□□□□ -0.1
TUBGCP4-208ENST00000564079 CAVIN4Q5BKX8 364 aa14.44□□□□□ -0.1
TUBGCP4-208ENST00000564079 NBPF14Q5TI25 921 aa14.44□□□□□ -0.1
TUBGCP4-208ENST00000564079 GPTP24298 496 aa14.43□□□□□ -0.1
TUBGCP4-208ENST00000564079 PSMA5P28066 241 aa14.43□□□□□ -0.1
TUBGCP4-208ENST00000564079 TXLNAP40222 546 aa14.43□□□□□ -0.1
TUBGCP4-208ENST00000564079 DZIP1Q86YF9 867 aaKnown RBP14.43□□□□□ -0.1
TUBGCP4-208ENST00000564079 ERC1Q8IUD2 1116 aa14.43□□□□□ -0.1
TUBGCP4-208ENST00000564079 NEBLO76041 1014 aa14.43□□□□□ -0.1
TUBGCP4-208ENST00000564079 FBXO31Q5XUX0 539 aaPredicted RBP14.43□□□□□ -0.1
TUBGCP4-208ENST00000564079 PDILTQ8N807 584 aa14.43□□□□□ -0.1
TUBGCP4-208ENST00000564079 STK3Q13188 491 aa14.43□□□□□ -0.1
TUBGCP4-208ENST00000564079 GNAI2P04899 355 aa14.42□□□□□ -0.1
TUBGCP4-208ENST00000564079 CEBPZQ03701 1054 aaKnown RBP14.42□□□□□ -0.1
TUBGCP4-208ENST00000564079 CEP126Q9P2H0 1117 aa14.42□□□□□ -0.1
TUBGCP4-208ENST00000564079 BRPF1P55201 1214 aaPredicted RBP14.42□□□□□ -0.1
TUBGCP4-208ENST00000564079 TSR2Q969E8 191 aaKnown RBP14.42□□□□□ -0.1
TUBGCP4-208ENST00000564079 PHF8Q9UPP1 1060 aa14.42□□□□□ -0.1
TUBGCP4-208ENST00000564079 OLFM4Q6UX06 510 aa14.42□□□□□ -0.1
TUBGCP4-208ENST00000564079 TCP11L2Q8N4U5 519 aa14.42□□□□□ -0.1
TUBGCP4-208ENST00000564079 SLC4A8Q2Y0W8 1093 aa14.42□□□□□ -0.1
TUBGCP4-208ENST00000564079 SASS6Q6UVJ0 657 aa14.42□□□□□ -0.1
TUBGCP4-208ENST00000564079 TRMT1LQ7Z2T5 733 aaKnown RBP14.42□□□□□ -0.1
TUBGCP4-208ENST00000564079 TRMT112Q9UI30 125 aaKnown RBP14.42□□□□□ -0.1
TUBGCP4-208ENST00000564079 RRP1P56182 461 aaKnown RBP14.41□□□□□ -0.1
TUBGCP4-208ENST00000564079 CNTLNQ9NXG0 1405 aa14.41□□□□□ -0.1
TUBGCP4-208ENST00000564079 EXOSC9Q06265 439 aaKnown RBP14.41□□□□□ -0.1
TUBGCP4-208ENST00000564079 FEZ1Q99689 392 aa14.41□□□□□ -0.1
TUBGCP4-208ENST00000564079 SRCIN1Q9C0H9 1055 aa14.41□□□□□ -0.1
TUBGCP4-208ENST00000564079 NBPF1Q3BBV0 1214 aa14.41□□□□□ -0.1
TUBGCP4-208ENST00000564079 HOMER1Q86YM7 354 aa14.41□□□□□ -0.1
TUBGCP4-208ENST00000564079 AACSQ86V21 672 aa14.4□□□□□ -0.1
TUBGCP4-208ENST00000564079 ST5P78524 1137 aa14.4□□□□□ -0.1
TUBGCP4-208ENST00000564079 ZSCAN25Q6NSZ9 544 aa14.4□□□□□ -0.1
TUBGCP4-208ENST00000564079 RBM26Q5T8P6 1007 aaKnown RBP14.4□□□□□ -0.1
TUBGCP4-208ENST00000564079 UBAC1Q9BSL1 405 aa14.4□□□□□ -0.1
TUBGCP4-208ENST00000564079 PRKRIP1Q9H875 184 aaPredicted RBP14.39□□□□□ -0.11
TUBGCP4-208ENST00000564079 BIN2Q9UBW5 565 aaPredicted RBP14.39□□□□□ -0.11
TUBGCP4-208ENST00000564079 CCDC96Q2M329 555 aa14.39□□□□□ -0.11
TUBGCP4-208ENST00000564079 STAC3Q96MF2 364 aa14.39□□□□□ -0.11
TUBGCP4-208ENST00000564079 MSH6P52701 1360 aa14.39□□□□□ -0.11
TUBGCP4-208ENST00000564079 MKNK2Q9HBH9 465 aa14.39□□□□□ -0.11
TUBGCP4-208ENST00000564079 MYD88Q99836 296 aa14.39□□□□□ -0.11
TUBGCP4-208ENST00000564079 GNAT3A8MTJ3 354 aa14.39□□□□□ -0.11
TUBGCP4-208ENST00000564079 MINDY4BA8MYZ0 360 aa14.39□□□□□ -0.11
TUBGCP4-208ENST00000564079 MAGEC2Q9UBF1 373 aaPredicted RBP14.39□□□□□ -0.11
TUBGCP4-208ENST00000564079 LRPPRCP42704 1394 aaKnown RBP14.38□□□□□ -0.11
TUBGCP4-208ENST00000564079 CUX1P39880 1505 aa14.38□□□□□ -0.11
TUBGCP4-208ENST00000564079 SKIDA1Q1XH10 827 aa14.38□□□□□ -0.11
TUBGCP4-208ENST00000564079 TTC16Q8NEE8 873 aa14.38□□□□□ -0.11
TUBGCP4-208ENST00000564079 LIG1P18858 919 aa14.38□□□□□ -0.11
TUBGCP4-208ENST00000564079 TFCP2L1Q9NZI6 479 aa14.38□□□□□ -0.11
TUBGCP4-208ENST00000564079 TANGO6Q9C0B7 1094 aa14.38□□□□□ -0.11
TUBGCP4-208ENST00000564079 SDF4Q9BRK5 362 aa14.38□□□□□ -0.11
TUBGCP4-208ENST00000564079 LMTK3Q96Q04 1460 aa14.37□□□□□ -0.11
TUBGCP4-208ENST00000564079 AIDAQ96BJ3 306 aa14.37□□□□□ -0.11
TUBGCP4-208ENST00000564079 MYO1BO43795 1136 aa14.37□□□□□ -0.11
TUBGCP4-208ENST00000564079 TRIM22Q8IYM9 498 aa14.37□□□□□ -0.11
TUBGCP4-208ENST00000564079 FGD6Q6ZV73 1430 aa14.37□□□□□ -0.11
TUBGCP4-208ENST00000564079 SEPT11Q9NVA2 429 aaKnown RBP14.37□□□□□ -0.11
TUBGCP4-208ENST00000564079 NOB1Q9ULX3 412 aaKnown RBP14.37□□□□□ -0.11
TUBGCP4-208ENST00000564079 ADAMTS8Q9UP79 889 aa14.37□□□□□ -0.11
TUBGCP4-208ENST00000564079 C9orf84Q5VXU9 1444 aa14.36□□□□□ -0.11
TUBGCP4-208ENST00000564079 DDX11L8A8MPP1 907 aa14.36□□□□□ -0.11
TUBGCP4-208ENST00000564079 HIP1O00291 1037 aa14.36□□□□□ -0.11
TUBGCP4-208ENST00000564079 DDX46Q7L014 1031 aaKnown RBP14.36□□□□□ -0.11
TUBGCP4-208ENST00000564079 NCOA2Q15596 1464 aa14.35□□□□□ -0.11
TUBGCP4-208ENST00000564079 TNIP1Q15025 636 aa14.35□□□□□ -0.11
TUBGCP4-208ENST00000564079 DRC1Q96MC2 740 aa14.35□□□□□ -0.11
TUBGCP4-208ENST00000564079 IFIT1P09914 478 aaKnown RBP14.35□□□□□ -0.11
TUBGCP4-208ENST00000564079 RDXP35241 583 aaKnown RBP14.35□□□□□ -0.11
TUBGCP4-208ENST00000564079 ZNF408Q9H9D4 720 aa14.35□□□□□ -0.11
TUBGCP4-208ENST00000564079 F8W031 263 aaPredicted RBP14.35□□□□□ -0.11
TUBGCP4-208ENST00000564079 SRGAP3O43295 1099 aa14.35□□□□□ -0.11
TUBGCP4-208ENST00000564079 PPP4R3AQ6IN85 833 aa14.35□□□□□ -0.11
TUBGCP4-208ENST00000564079 ZBTB3Q9H5J0 574 aa14.35□□□□□ -0.11
TUBGCP4-208ENST00000564079 CADPS2Q86UW7 1296 aa14.35□□□□□ -0.11
TUBGCP4-208ENST00000564079 RBM19Q9Y4C8 960 aaKnown RBP14.34□□□□□ -0.11
TUBGCP4-208ENST00000564079 CCDC61Q9Y6R9 512 aa14.34□□□□□ -0.11
TUBGCP4-208ENST00000564079 MCM10Q7L590 875 aa14.34□□□□□ -0.11
TUBGCP4-208ENST00000564079 FMNL2Q96PY5 1086 aa14.34□□□□□ -0.11
TUBGCP4-208ENST00000564079 BCAR3O75815 825 aa14.34□□□□□ -0.11
TUBGCP4-208ENST00000564079 NBPF6Q5VWK0 638 aa14.34□□□□□ -0.11
TUBGCP4-208ENST00000564079 NBPF5PQ86XG9 351 aaPredicted RBP14.34□□□□□ -0.11
TUBGCP4-208ENST00000564079 NBPF4Q96M43 638 aa14.34□□□□□ -0.11
TUBGCP4-208ENST00000564079 TRIM21P19474 475 aaKnown RBP14.33□□□□□ -0.12
TUBGCP4-208ENST00000564079 CCDC173Q0VFZ6 552 aa14.33□□□□□ -0.12
TUBGCP4-208ENST00000564079 BEGAINQ9BUH8 593 aa14.33□□□□□ -0.12
TUBGCP4-208ENST00000564079 SEC63Q9UGP8 760 aaKnown RBP14.33□□□□□ -0.12
TUBGCP4-208ENST00000564079 PLEKHH2Q8IVE3 1493 aa14.33□□□□□ -0.12
TUBGCP4-208ENST00000564079 CDC45O75419 566 aa14.33□□□□□ -0.12
TUBGCP4-208ENST00000564079 ATP6V1AP38606 617 aa14.32□□□□□ -0.12
TUBGCP4-208ENST00000564079 CAGE1Q8TC20 777 aa14.32□□□□□ -0.12
TUBGCP4-208ENST00000564079 EPRSP07814 1512 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms