RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 EYA1Q99502 592 aa7.64□□□□□ -1.19
HERPUD1-207ENST00000563781 PODXL2Q9NZ53 605 aa7.64□□□□□ -1.19
HERPUD1-207ENST00000563781 E9PCH4 1651 aa7.63□□□□□ -1.19
HERPUD1-207ENST00000563781 NBPF26B4DH59 902 aa7.63□□□□□ -1.19
HERPUD1-207ENST00000563781 OATP04181 439 aa7.63□□□□□ -1.19
HERPUD1-207ENST00000563781 NUDT18Q6ZVK8 323 aa7.63□□□□□ -1.19
HERPUD1-207ENST00000563781 CCDC102AQ96A19 550 aa7.63□□□□□ -1.19
HERPUD1-207ENST00000563781 PNMA3Q9UL41 463 aa7.63□□□□□ -1.19
HERPUD1-207ENST00000563781 C3P01024 1663 aa7.63□□□□□ -1.19
HERPUD1-207ENST00000563781 SYNMO15061 1565 aa7.63□□□□□ -1.19
HERPUD1-207ENST00000563781 TNRQ92752 1358 aa7.62□□□□□ -1.19
HERPUD1-207ENST00000563781 ANKRD30BQ9BXX2 1392 aa7.62□□□□□ -1.19
HERPUD1-207ENST00000563781 SMAPO00193 183 aa7.62□□□□□ -1.19
HERPUD1-207ENST00000563781 PXYLP1Q8TE99 480 aa7.62□□□□□ -1.19
HERPUD1-207ENST00000563781 TRPM2O94759 1503 aa7.62□□□□□ -1.19
HERPUD1-207ENST00000563781 ILDR2Q71H61 639 aa7.61□□□□□ -1.19
HERPUD1-207ENST00000563781 METTL3Q86U44 580 aaKnown RBP7.61□□□□□ -1.19
HERPUD1-207ENST00000563781 RBM46Q8TBY0 533 aaKnown RBP7.61□□□□□ -1.19
HERPUD1-207ENST00000563781 UGGT1Q9NYU2 1555 aa7.61□□□□□ -1.19
HERPUD1-207ENST00000563781 PREX1Q8TCU6 1659 aa7.6□□□□□ -1.19
HERPUD1-207ENST00000563781 TRIM66O15016 1216 aa7.6□□□□□ -1.19
HERPUD1-207ENST00000563781 LAPTM4BQ86VI4 370 aa7.6□□□□□ -1.19
HERPUD1-207ENST00000563781 PHOX2BQ99453 314 aa7.6□□□□□ -1.19
HERPUD1-207ENST00000563781 NBPF3Q9H094 633 aa7.6□□□□□ -1.19
HERPUD1-207ENST00000563781 SEPT9Q9UHD8 586 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-207ENST00000563781 MRPL50Q8N5N7 158 aaKnown RBP7.59□□□□□ -1.19
HERPUD1-207ENST00000563781 PIK3C2BO00750 1634 aa7.59□□□□□ -1.19
HERPUD1-207ENST00000563781 SPHKAPQ2M3C7 1700 aa7.58□□□□□ -1.2
HERPUD1-207ENST00000563781 LMTK3Q96Q04 1460 aa7.58□□□□□ -1.2
HERPUD1-207ENST00000563781 NLRP1Q9C000 1473 aa7.58□□□□□ -1.2
HERPUD1-207ENST00000563781 RCCD1A6NED2 376 aa7.58□□□□□ -1.2
HERPUD1-207ENST00000563781 IDI1Q13907 227 aa7.58□□□□□ -1.2
HERPUD1-207ENST00000563781 FAM98CQ17RN3 349 aaKnown RBP7.58□□□□□ -1.2
HERPUD1-207ENST00000563781 SLC52A1Q9NWF4 448 aa7.58□□□□□ -1.2
HERPUD1-207ENST00000563781 CLTCL1P53675 1640 aa7.58□□□□□ -1.2
HERPUD1-207ENST00000563781 A2ML1A8K2U0 1454 aa7.57□□□□□ -1.2
HERPUD1-207ENST00000563781 MYO3AQ8NEV4 1616 aa7.57□□□□□ -1.2
HERPUD1-207ENST00000563781 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.57□□□□□ -1.2
HERPUD1-207ENST00000563781 FBXO41Q8TF61 875 aa7.57□□□□□ -1.2
HERPUD1-207ENST00000563781 STAC3Q96MF2 364 aa7.57□□□□□ -1.2
HERPUD1-207ENST00000563781 CCDC144AA2RUR9 1427 aa7.57□□□□□ -1.2
HERPUD1-207ENST00000563781 SPATA31E1Q6ZUB1 1445 aa7.57□□□□□ -1.2
HERPUD1-207ENST00000563781 ADGRB3O60242 1522 aa7.57□□□□□ -1.2
HERPUD1-207ENST00000563781 CLSPNQ9HAW4 1339 aa7.56□□□□□ -1.2
HERPUD1-207ENST00000563781 UHRF1BP1Q6BDS2 1440 aa7.56□□□□□ -1.2
HERPUD1-207ENST00000563781 DNAJB2P25686 324 aa7.56□□□□□ -1.2
HERPUD1-207ENST00000563781 AMHR2Q16671 573 aa7.56□□□□□ -1.2
HERPUD1-207ENST00000563781 CCER1Q8TC90 406 aaPredicted RBP7.56□□□□□ -1.2
HERPUD1-207ENST00000563781 SIN3AQ96ST3 1273 aa7.56□□□□□ -1.2
HERPUD1-207ENST00000563781 CEP170BQ9Y4F5 1589 aaPredicted RBP7.55□□□□□ -1.2
HERPUD1-207ENST00000563781 PDE4DQ08499 809 aa7.55□□□□□ -1.2
HERPUD1-207ENST00000563781 NEUROD2Q15784 382 aa7.55□□□□□ -1.2
HERPUD1-207ENST00000563781 NLRP7Q8WX94 980 aa7.55□□□□□ -1.2
HERPUD1-207ENST00000563781 ZFRQ96KR1 1074 aaKnown RBP7.55□□□□□ -1.2
HERPUD1-207ENST00000563781 TMEM131LA2VDJ0 1609 aa7.55□□□□□ -1.2
HERPUD1-207ENST00000563781 ZNF142P52746 1687 aaPredicted RBP7.54□□□□□ -1.2
HERPUD1-207ENST00000563781 TMUB1Q9BVT8 246 aa7.54□□□□□ -1.2
HERPUD1-207ENST00000563781 TMEM134Q9H6X4 195 aa7.54□□□□□ -1.2
HERPUD1-207ENST00000563781 NEURL4Q96JN8 1562 aa7.54□□□□□ -1.2
HERPUD1-207ENST00000563781 ZFYVE9O95405 1425 aa7.53□□□□□ -1.2
HERPUD1-207ENST00000563781 MDM2Q00987 491 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-207ENST00000563781 SPNS2Q8IVW8 549 aa7.53□□□□□ -1.2
HERPUD1-207ENST00000563781 REPIN1Q9BWE0 567 aaKnown RBP7.53□□□□□ -1.2
HERPUD1-207ENST00000563781 ARHGAP23Q9P227 1491 aa7.53□□□□□ -1.2
HERPUD1-207ENST00000563781 SLIT1O75093 1534 aa7.52□□□□□ -1.2
HERPUD1-207ENST00000563781 UBR1Q8IWV7 1749 aa7.52□□□□□ -1.2
HERPUD1-207ENST00000563781 CFAP65Q6ZU64 1925 aaKnown RBP7.52□□□□□ -1.2
HERPUD1-207ENST00000563781 TMEM2Q9UHN6 1383 aa7.52□□□□□ -1.21
HERPUD1-207ENST00000563781 GOLGA8CPA6NN73 597 aa7.52□□□□□ -1.21
HERPUD1-207ENST00000563781 SOCS7O14512 581 aa7.52□□□□□ -1.21
HERPUD1-207ENST00000563781 CLCN1P35523 988 aa7.52□□□□□ -1.21
HERPUD1-207ENST00000563781 NEUROD1Q13562 356 aa7.52□□□□□ -1.21
HERPUD1-207ENST00000563781 SWT1Q5T5J6 900 aaKnown RBP7.52□□□□□ -1.21
HERPUD1-207ENST00000563781 RIMS2Q9UQ26 1411 aa7.52□□□□□ -1.21
HERPUD1-207ENST00000563781 KDM5AP29375 1690 aaKnown RBP7.51□□□□□ -1.21
HERPUD1-207ENST00000563781 HDGFP51858 240 aaKnown RBP7.51□□□□□ -1.21
HERPUD1-207ENST00000563781 RGL3Q3MIN7 710 aa7.51□□□□□ -1.21
HERPUD1-207ENST00000563781 SAMD7Q7Z3H4 446 aa7.51□□□□□ -1.21
HERPUD1-207ENST00000563781 PARP9Q8IXQ6 854 aa7.51□□□□□ -1.21
HERPUD1-207ENST00000563781 THEMISQ8N1K5 641 aaPredicted RBP7.51□□□□□ -1.21
HERPUD1-207ENST00000563781 GPCPD1Q9NPB8 672 aa7.51□□□□□ -1.21
HERPUD1-207ENST00000563781 SETD1BQ9UPS6 1966 aaKnown RBP7.51□□□□□ -1.21
HERPUD1-207ENST00000563781 NEXMIFQ5QGS0 1516 aa7.51□□□□□ -1.21
HERPUD1-207ENST00000563781 LTKP29376 864 aa7.5□□□□□ -1.21
HERPUD1-207ENST00000563781 HSPA2P54652 639 aa7.5□□□□□ -1.21
HERPUD1-207ENST00000563781 ANKK1Q8NFD2 765 aa7.5□□□□□ -1.21
HERPUD1-207ENST00000563781 RPGRIP1LQ68CZ1 1315 aa7.5□□□□□ -1.21
HERPUD1-207ENST00000563781 SOWAHBA6NEL2 793 aa7.49□□□□□ -1.21
HERPUD1-207ENST00000563781 TTLL12Q14166 644 aaPredicted RBP7.49□□□□□ -1.21
HERPUD1-207ENST00000563781 ZNF326Q5BKZ1 582 aaKnown RBP7.49□□□□□ -1.21
HERPUD1-207ENST00000563781 WNT2BQ93097 391 aa7.49□□□□□ -1.21
HERPUD1-207ENST00000563781 L3MBTL2Q969R5 705 aa7.49□□□□□ -1.21
HERPUD1-207ENST00000563781 ADGRF5Q8IZF2 1346 aa7.49□□□□□ -1.21
HERPUD1-207ENST00000563781 MYOM2P54296 1465 aa7.49□□□□□ -1.21
HERPUD1-207ENST00000563781 SCAF11Q99590 1463 aaKnown RBP7.49□□□□□ -1.21
HERPUD1-207ENST00000563781 NRXN1Q9ULB1 1477 aa7.49□□□□□ -1.21
HERPUD1-207ENST00000563781 TONSLQ96HA7 1378 aa7.48□□□□□ -1.21
HERPUD1-207ENST00000563781 NUTM2DQ5VT03 806 aaPredicted RBP7.48□□□□□ -1.21
HERPUD1-207ENST00000563781 GIGYF2Q6Y7W6 1299 aaKnown RBP7.48□□□□□ -1.21
HERPUD1-207ENST00000563781 SLF2Q8IX21 1173 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms