RNA–Protein interactions for RNA: ENST00000563629.1

CYLD-205, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 2,568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-205ENST00000563629 RRS1Q15050 365 aaKnown RBP9.85□□□□□ -0.83
CYLD-205ENST00000563629 NFKBIBQ15653 356 aa9.85□□□□□ -0.83
CYLD-205ENST00000563629 SLKQ9H2G2 1235 aaPredicted RBP9.85□□□□□ -0.83
CYLD-205ENST00000563629 TECPR2O15040 1411 aa9.85□□□□□ -0.83
CYLD-205ENST00000563629 FOXO3O43524 673 aa9.85□□□□□ -0.83
CYLD-205ENST00000563629 LMOD2Q6P5Q4 547 aa9.85□□□□□ -0.83
CYLD-205ENST00000563629 LRRC7Q96NW7 1537 aa9.85□□□□□ -0.83
CYLD-205ENST00000563629 PUS7Q96PZ0 661 aaKnown RBP9.85□□□□□ -0.83
CYLD-205ENST00000563629 FAM135BQ49AJ0 1406 aa9.84□□□□□ -0.83
CYLD-205ENST00000563629 SPRYD3Q8NCJ5 442 aa9.84□□□□□ -0.83
CYLD-205ENST00000563629 MAP2P11137 1827 aaKnown RBP9.84□□□□□ -0.83
CYLD-205ENST00000563629 PHACTR3Q96KR7 559 aa9.84□□□□□ -0.83
CYLD-205ENST00000563629 RWDD1Q9H446 243 aaPredicted RBP9.84□□□□□ -0.83
CYLD-205ENST00000563629 LMTK3Q96Q04 1460 aa9.84□□□□□ -0.83
CYLD-205ENST00000563629 USP19O94966 1318 aa9.83□□□□□ -0.84
CYLD-205ENST00000563629 TMEM57Q8N5G2 664 aa9.83□□□□□ -0.84
CYLD-205ENST00000563629 SIRT1Q96EB6 747 aa9.83□□□□□ -0.84
CYLD-205ENST00000563629 POLKQ9UBT6 870 aa9.83□□□□□ -0.84
CYLD-205ENST00000563629 ZBTB7CA1YPR0 619 aa9.82□□□□□ -0.84
CYLD-205ENST00000563629 FRAT2O75474 233 aaPredicted RBP9.82□□□□□ -0.84
CYLD-205ENST00000563629 C1orf115Q9H7X2 142 aa9.82□□□□□ -0.84
CYLD-205ENST00000563629 DLC1Q96QB1 1528 aa9.82□□□□□ -0.84
CYLD-205ENST00000563629 TMEM94Q12767 1356 aa9.82□□□□□ -0.84
CYLD-205ENST00000563629 ATF7IPQ6VMQ6 1270 aa9.82□□□□□ -0.84
CYLD-205ENST00000563629 RTN4Q9NQC3 1192 aaKnown RBP9.82□□□□□ -0.84
CYLD-205ENST00000563629 ATP7BP35670 1465 aa9.82□□□□□ -0.84
CYLD-205ENST00000563629 CPS1P31327 1500 aa9.81□□□□□ -0.84
CYLD-205ENST00000563629 FAM83GA6ND36 823 aa9.81□□□□□ -0.84
CYLD-205ENST00000563629 MFAP1P55081 439 aaKnown RBP9.81□□□□□ -0.84
CYLD-205ENST00000563629 DCTN1Q14203 1278 aa9.81□□□□□ -0.84
CYLD-205ENST00000563629 RSPH6AQ9H0K4 717 aa9.81□□□□□ -0.84
CYLD-205ENST00000563629 ZNF142P52746 1687 aaPredicted RBP9.8□□□□□ -0.84
CYLD-205ENST00000563629 TSPYL6Q8N831 410 aa9.8□□□□□ -0.84
CYLD-205ENST00000563629 UPF2Q9HAU5 1272 aaKnown RBP9.8□□□□□ -0.84
CYLD-205ENST00000563629 DDX19BQ9UMR2 479 aa9.8□□□□□ -0.84
CYLD-205ENST00000563629 TTC21BQ7Z4L5 1316 aa9.8□□□□□ -0.84
CYLD-205ENST00000563629 USP35Q9P2H5 1018 aa9.79□□□□□ -0.84
CYLD-205ENST00000563629 PHF8Q9UPP1 1060 aa9.79□□□□□ -0.84
CYLD-205ENST00000563629 PTCH1Q13635 1447 aa9.79□□□□□ -0.84
CYLD-205ENST00000563629 FCHSD2O94868 740 aa9.79□□□□□ -0.84
CYLD-205ENST00000563629 NLRP6P59044 892 aa9.79□□□□□ -0.84
CYLD-205ENST00000563629 PSME1Q06323 249 aa9.79□□□□□ -0.84
CYLD-205ENST00000563629 IL27Q8NEV9 243 aa9.79□□□□□ -0.84
CYLD-205ENST00000563629 RGPD8O14715 1765 aaPredicted RBP9.78□□□□□ -0.84
CYLD-205ENST00000563629 PLEKHG3A1L390 1219 aa9.78□□□□□ -0.84
CYLD-205ENST00000563629 ABTB2Q8N961 1025 aa9.78□□□□□ -0.84
CYLD-205ENST00000563629 COG3Q96JB2 828 aa9.78□□□□□ -0.84
CYLD-205ENST00000563629 LNPKQ9C0E8 428 aa9.78□□□□□ -0.84
CYLD-205ENST00000563629 PNNQ9H307 717 aaKnown RBP9.78□□□□□ -0.84
CYLD-205ENST00000563629 C19orf44Q9H6X5 657 aa9.78□□□□□ -0.84
CYLD-205ENST00000563629 CPSF1Q10570 1443 aaKnown RBP9.78□□□□□ -0.84
CYLD-205ENST00000563629 PNPLA6Q8IY17 1366 aa9.77□□□□□ -0.84
CYLD-205ENST00000563629 PIK3R4Q99570 1358 aa9.77□□□□□ -0.84
CYLD-205ENST00000563629 ATF3P18847 181 aa9.77□□□□□ -0.84
CYLD-205ENST00000563629 KIF16BQ96L93 1317 aa9.77□□□□□ -0.85
CYLD-205ENST00000563629 NFE2L2Q16236 605 aa9.77□□□□□ -0.85
CYLD-205ENST00000563629 AEBP1Q8IUX7 1158 aa9.77□□□□□ -0.85
CYLD-205ENST00000563629 ZNF692Q9BU19 519 aaPredicted RBP9.77□□□□□ -0.85
CYLD-205ENST00000563629 MBIPQ9NS73 344 aa9.77□□□□□ -0.85
CYLD-205ENST00000563629 DIP2AQ14689 1571 aa9.77□□□□□ -0.85
CYLD-205ENST00000563629 CT47B1P0C2W7 299 aaPredicted RBP9.76□□□□□ -0.85
CYLD-205ENST00000563629 BECN1Q14457 450 aa9.76□□□□□ -0.85
CYLD-205ENST00000563629 ARXQ96QS3 562 aa9.76□□□□□ -0.85
CYLD-205ENST00000563629 DLG5Q8TDM6 1919 aa9.76□□□□□ -0.85
CYLD-205ENST00000563629 IPO8O15397 1037 aaKnown RBP9.76□□□□□ -0.85
CYLD-205ENST00000563629 IL13P35225 146 aa9.76□□□□□ -0.85
CYLD-205ENST00000563629 GSE1Q14687 1217 aa9.76□□□□□ -0.85
CYLD-205ENST00000563629 CABLES1Q8TDN4 633 aa9.76□□□□□ -0.85
CYLD-205ENST00000563629 LTV1Q96GA3 475 aaPredicted RBP9.76□□□□□ -0.85
CYLD-205ENST00000563629 CHD2O14647 1828 aaKnown RBP9.76□□□□□ -0.85
CYLD-205ENST00000563629 XRN1Q8IZH2 1706 aaKnown RBP9.76□□□□□ -0.85
CYLD-205ENST00000563629 KRT24Q2M2I5 525 aa9.75□□□□□ -0.85
CYLD-205ENST00000563629 HSP90AB2PQ58FF8 381 aa9.75□□□□□ -0.85
CYLD-205ENST00000563629 IL16Q14005 1332 aa9.75□□□□□ -0.85
CYLD-205ENST00000563629 EDC4Q6P2E9 1401 aaKnown RBP9.75□□□□□ -0.85
CYLD-205ENST00000563629 AAMPQ13685 434 aa9.75□□□□□ -0.85
CYLD-205ENST00000563629 TBC1D32Q96NH3 1257 aa9.75□□□□□ -0.85
CYLD-205ENST00000563629 ZBTB40Q9NUA8 1239 aa9.75□□□□□ -0.85
CYLD-205ENST00000563629 KNDC1Q76NI1 1749 aa9.75□□□□□ -0.85
CYLD-205ENST00000563629 TWISTNBQ3B726 338 aaPredicted RBP9.74□□□□□ -0.85
CYLD-205ENST00000563629 C8orf58Q8NAV2 365 aa9.74□□□□□ -0.85
CYLD-205ENST00000563629 TBC1D2Q9BYX2 928 aa9.74□□□□□ -0.85
CYLD-205ENST00000563629 ITSN1Q15811 1721 aa9.74□□□□□ -0.85
CYLD-205ENST00000563629 USP6P35125 1406 aa9.74□□□□□ -0.85
CYLD-205ENST00000563629 ADGRL3Q9HAR2 1447 aa9.74□□□□□ -0.85
CYLD-205ENST00000563629 SULT6B1Q6IMI4 303 aa9.74□□□□□ -0.85
CYLD-205ENST00000563629 BRPF3Q9ULD4 1205 aa9.74□□□□□ -0.85
CYLD-205ENST00000563629 STRCP1A6NGW2 1772 aa9.74□□□□□ -0.85
CYLD-205ENST00000563629 VAMP4O75379 141 aa9.73□□□□□ -0.85
CYLD-205ENST00000563629 HDAC1Q13547 482 aaPredicted RBP9.73□□□□□ -0.85
CYLD-205ENST00000563629 ANKRD45Q5TZF3 282 aa9.73□□□□□ -0.85
CYLD-205ENST00000563629 MCM10Q7L590 875 aa9.73□□□□□ -0.85
CYLD-205ENST00000563629 C22orf23Q9BZE7 217 aa9.73□□□□□ -0.85
CYLD-205ENST00000563629 NALCNQ8IZF0 1738 aa9.73□□□□□ -0.85
CYLD-205ENST00000563629 STRCQ7RTU9 1775 aa9.73□□□□□ -0.85
CYLD-205ENST00000563629 GNAI1P63096 354 aa9.73□□□□□ -0.85
CYLD-205ENST00000563629 APBB1O00213 710 aa9.72□□□□□ -0.85
CYLD-205ENST00000563629 ALDH1L2Q3SY69 923 aa9.72□□□□□ -0.85
CYLD-205ENST00000563629 NCBP3Q53F19 620 aaKnown RBP9.72□□□□□ -0.85
CYLD-205ENST00000563629 KRT28Q7Z3Y7 464 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms