RNA–Protein interactions for RNA: ENST00000563512.1

NSMCE1-205, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 4

Gene NSMCE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-205ENST00000563512 ANKLE1Q8NAG6 615 aa12.63□□□□□ -0.39
NSMCE1-205ENST00000563512 FAM117AQ9C073 453 aa12.63□□□□□ -0.39
NSMCE1-205ENST00000563512 PCDHGC3Q9UN70 934 aa12.63□□□□□ -0.39
NSMCE1-205ENST00000563512 ZNF518AQ6AHZ1 1483 aa12.63□□□□□ -0.39
NSMCE1-205ENST00000563512 MAGI2Q86UL8 1455 aa12.63□□□□□ -0.39
NSMCE1-205ENST00000563512 POGZQ7Z3K3 1410 aa12.62□□□□□ -0.39
NSMCE1-205ENST00000563512 LRRC9Q6ZRR7 1453 aa12.62□□□□□ -0.39
NSMCE1-205ENST00000563512 MYSM1Q5VVJ2 828 aa12.62□□□□□ -0.39
NSMCE1-205ENST00000563512 SYMPKQ92797 1274 aaKnown RBP12.62□□□□□ -0.39
NSMCE1-205ENST00000563512 PLEKHH2Q8IVE3 1493 aa12.61□□□□□ -0.39
NSMCE1-205ENST00000563512 SPTLC1O15269 473 aa12.61□□□□□ -0.39
NSMCE1-205ENST00000563512 RETREG3Q86VR2 466 aa12.61□□□□□ -0.39
NSMCE1-205ENST00000563512 PRKD2Q9BZL6 878 aa12.61□□□□□ -0.39
NSMCE1-205ENST00000563512 PRDM9Q9NQV7 894 aa12.61□□□□□ -0.39
NSMCE1-205ENST00000563512 ZFYVE16Q7Z3T8 1539 aa12.61□□□□□ -0.39
NSMCE1-205ENST00000563512 GPATCH8Q9UKJ3 1502 aaKnown RBP12.61□□□□□ -0.39
NSMCE1-205ENST00000563512 KIDINS220Q9ULH0 1771 aa12.61□□□□□ -0.39
NSMCE1-205ENST00000563512 BCORL1Q5H9F3 1711 aa12.6□□□□□ -0.39
NSMCE1-205ENST00000563512 MTMR2Q13614 643 aa12.6□□□□□ -0.39
NSMCE1-205ENST00000563512 ADGBQ8N7X0 1667 aa12.6□□□□□ -0.39
NSMCE1-205ENST00000563512 REREQ9P2R6 1566 aa12.6□□□□□ -0.39
NSMCE1-205ENST00000563512 INO80Q9ULG1 1556 aaPredicted RBP12.6□□□□□ -0.39
NSMCE1-205ENST00000563512 NCOA2Q15596 1464 aa12.59□□□□□ -0.39
NSMCE1-205ENST00000563512 CROCC2H7BZ55 1655 aa12.59□□□□□ -0.39
NSMCE1-205ENST00000563512 SPDYE5A6NIY4 337 aa12.59□□□□□ -0.39
NSMCE1-205ENST00000563512 CSPP1Q1MSJ5 1256 aa12.59□□□□□ -0.39
NSMCE1-205ENST00000563512 EFCAB2Q5VUJ9 269 aa12.59□□□□□ -0.39
NSMCE1-205ENST00000563512 ABCA6Q8N139 1617 aa12.59□□□□□ -0.39
NSMCE1-205ENST00000563512 FER1L4A9Z1Z3 1794 aa12.58□□□□□ -0.39
NSMCE1-205ENST00000563512 SYCP2Q9BX26 1530 aa12.58□□□□□ -0.4
NSMCE1-205ENST00000563512 BRPF1P55201 1214 aaPredicted RBP12.58□□□□□ -0.4
NSMCE1-205ENST00000563512 CCNB3Q8WWL7 1395 aa12.57□□□□□ -0.4
NSMCE1-205ENST00000563512 SCAPERQ9BY12 1400 aa12.57□□□□□ -0.4
NSMCE1-205ENST00000563512 CLK2P49760 499 aaKnown RBP12.57□□□□□ -0.4
NSMCE1-205ENST00000563512 ZBTB3Q9H5J0 574 aa12.57□□□□□ -0.4
NSMCE1-205ENST00000563512 POLR3EQ9NVU0 708 aa12.57□□□□□ -0.4
NSMCE1-205ENST00000563512 FCF1Q9Y324 198 aaKnown RBP12.57□□□□□ -0.4
NSMCE1-205ENST00000563512 PCDHB15Q9Y5E8 787 aa12.57□□□□□ -0.4
NSMCE1-205ENST00000563512 ADAMTSL3P82987 1691 aa12.57□□□□□ -0.4
NSMCE1-205ENST00000563512 SIGLEC1Q9BZZ2 1709 aa12.57□□□□□ -0.4
NSMCE1-205ENST00000563512 DIP2CQ9Y2E4 1556 aa12.56□□□□□ -0.4
NSMCE1-205ENST00000563512 V9GY48 417 aaPredicted RBP12.56□□□□□ -0.4
NSMCE1-205ENST00000563512 ARHGEF5Q12774 1597 aa12.56□□□□□ -0.4
NSMCE1-205ENST00000563512 KIAA1107Q9UPP5 1409 aa12.55□□□□□ -0.4
NSMCE1-205ENST00000563512 NUTM2BA6NNL0 878 aaPredicted RBP12.55□□□□□ -0.4
NSMCE1-205ENST00000563512 NUTM2EB1AL46 878 aaPredicted RBP12.55□□□□□ -0.4
NSMCE1-205ENST00000563512 SLC19A1P41440 591 aa12.55□□□□□ -0.4
NSMCE1-205ENST00000563512 MMP16P51512 607 aa12.55□□□□□ -0.4
NSMCE1-205ENST00000563512 NUTM2DQ5VT03 806 aaPredicted RBP12.55□□□□□ -0.4
NSMCE1-205ENST00000563512 NUTM2AQ8IVF1 878 aaPredicted RBP12.55□□□□□ -0.4
NSMCE1-205ENST00000563512 LIMD1Q9UGP4 676 aa12.55□□□□□ -0.4
NSMCE1-205ENST00000563512 MLH3Q9UHC1 1453 aa12.54□□□□□ -0.4
NSMCE1-205ENST00000563512 JUNDP17535 347 aa12.54□□□□□ -0.4
NSMCE1-205ENST00000563512 PRPF38BQ5VTL8 546 aaKnown RBP12.54□□□□□ -0.4
NSMCE1-205ENST00000563512 PRR7Q8TB68 274 aa12.54□□□□□ -0.4
NSMCE1-205ENST00000563512 SETD1BQ9UPS6 1966 aaKnown RBP12.53□□□□□ -0.4
NSMCE1-205ENST00000563512 DXOO77932 396 aaKnown RBP12.53□□□□□ -0.4
NSMCE1-205ENST00000563512 IL27Q8NEV9 243 aa12.53□□□□□ -0.4
NSMCE1-205ENST00000563512 ATP7AQ04656 1500 aa12.52□□□□□ -0.4
NSMCE1-205ENST00000563512 ARHGEF12Q9NZN5 1544 aa12.52□□□□□ -0.4
NSMCE1-205ENST00000563512 PLEKHG3A1L390 1219 aa12.52□□□□□ -0.41
NSMCE1-205ENST00000563512 ZBTB24O43167 697 aaPredicted RBP12.52□□□□□ -0.41
NSMCE1-205ENST00000563512 HRCP23327 699 aa12.52□□□□□ -0.41
NSMCE1-205ENST00000563512 SKIV2LQ15477 1246 aaKnown RBP12.52□□□□□ -0.41
NSMCE1-205ENST00000563512 TUSC1Q2TAM9 212 aa12.52□□□□□ -0.41
NSMCE1-205ENST00000563512 SH3D19Q5HYK7 790 aa12.52□□□□□ -0.41
NSMCE1-205ENST00000563512 CCDC24Q8N4L8 307 aa12.52□□□□□ -0.41
NSMCE1-205ENST00000563512 CAMSAP2Q08AD1 1489 aa12.52□□□□□ -0.41
NSMCE1-205ENST00000563512 MYOM3Q5VTT5 1437 aa12.51□□□□□ -0.41
NSMCE1-205ENST00000563512 MIA2Q96PC5 1412 aa12.51□□□□□ -0.41
NSMCE1-205ENST00000563512 MAST1Q9Y2H9 1570 aa12.51□□□□□ -0.41
NSMCE1-205ENST00000563512 PTPN23Q9H3S7 1636 aa12.51□□□□□ -0.41
NSMCE1-205ENST00000563512 RAPGEF3O95398 923 aa12.5□□□□□ -0.41
NSMCE1-205ENST00000563512 CABLES1Q8TDN4 633 aa12.5□□□□□ -0.41
NSMCE1-205ENST00000563512 C9orf84Q5VXU9 1444 aa12.5□□□□□ -0.41
NSMCE1-205ENST00000563512 PLXNC1O60486 1568 aa12.5□□□□□ -0.41
NSMCE1-205ENST00000563512 MADDQ8WXG6 1647 aa12.5□□□□□ -0.41
NSMCE1-205ENST00000563512 RIMS1Q86UR5 1692 aaKnown RBP12.5□□□□□ -0.41
NSMCE1-205ENST00000563512 CCDC141Q6ZP82 1450 aa12.49□□□□□ -0.41
NSMCE1-205ENST00000563512 MROH2AA6NES4 1674 aa12.48□□□□□ -0.41
NSMCE1-205ENST00000563512 DNMT1P26358 1616 aaKnown RBP12.48□□□□□ -0.41
NSMCE1-205ENST00000563512 AGLP35573 1532 aa12.48□□□□□ -0.41
NSMCE1-205ENST00000563512 ATP10AO60312 1499 aa12.48□□□□□ -0.41
NSMCE1-205ENST00000563512 YEATS2Q9ULM3 1422 aa12.48□□□□□ -0.41
NSMCE1-205ENST00000563512 TRAPPC8Q9Y2L5 1435 aa12.48□□□□□ -0.41
NSMCE1-205ENST00000563512 QPCTQ16769 361 aa12.48□□□□□ -0.41
NSMCE1-205ENST00000563512 PLA2G2CQ5R387 149 aa12.48□□□□□ -0.41
NSMCE1-205ENST00000563512 TSC1Q92574 1164 aa12.48□□□□□ -0.41
NSMCE1-205ENST00000563512 CFDP1Q9UEE9 299 aaPredicted RBP12.48□□□□□ -0.41
NSMCE1-205ENST00000563512 RPIAP49247 311 aa12.47□□□□□ -0.41
NSMCE1-205ENST00000563512 LIAT1Q6ZQX7 453 aa12.47□□□□□ -0.41
NSMCE1-205ENST00000563512 MBD5Q9P267 1494 aa12.46□□□□□ -0.41
NSMCE1-205ENST00000563512 LILRB3O75022 631 aa12.46□□□□□ -0.41
NSMCE1-205ENST00000563512 CD2BP2O95400 341 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-205ENST00000563512 SPRYD7Q5W111 196 aa12.46□□□□□ -0.41
NSMCE1-205ENST00000563512 DESI1Q6ICB0 168 aa12.46□□□□□ -0.41
NSMCE1-205ENST00000563512 NUDT12Q9BQG2 462 aa12.46□□□□□ -0.41
NSMCE1-205ENST00000563512 EIF2AK4Q9P2K8 1649 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-205ENST00000563512 CFAP99D6REC4 459 aa12.45□□□□□ -0.42
NSMCE1-205ENST00000563512 IRX2Q9BZI1 471 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms