RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 KIF24Q5T7B8 1368 aa16.43■□□□□ 0.22
USB1-207ENST00000563149 EIF5BO60841 1220 aaKnown RBP16.43■□□□□ 0.22
USB1-207ENST00000563149 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.43■□□□□ 0.22
USB1-207ENST00000563149 WASLO00401 505 aaPredicted RBP16.42■□□□□ 0.22
USB1-207ENST00000563149 MCM4P33991 863 aa16.42■□□□□ 0.22
USB1-207ENST00000563149 RTN4Q9NQC3 1192 aaKnown RBP16.42■□□□□ 0.22
USB1-207ENST00000563149 WAPLQ7Z5K2 1190 aa16.41■□□□□ 0.22
USB1-207ENST00000563149 KNDC1Q76NI1 1749 aa16.41■□□□□ 0.22
USB1-207ENST00000563149 ABCC4O15439 1325 aa16.41■□□□□ 0.22
USB1-207ENST00000563149 NCOA3Q9Y6Q9 1424 aa16.41■□□□□ 0.22
USB1-207ENST00000563149 PHACTR3Q96KR7 559 aa16.41■□□□□ 0.22
USB1-207ENST00000563149 MON2Q7Z3U7 1717 aa16.4■□□□□ 0.22
USB1-207ENST00000563149 FAM43AQ8N2R8 423 aa16.4■□□□□ 0.22
USB1-207ENST00000563149 CFAP44Q96MT7 982 aa16.4■□□□□ 0.22
USB1-207ENST00000563149 API5Q9BZZ5 524 aaKnown RBP16.4■□□□□ 0.22
USB1-207ENST00000563149 SENP3Q9H4L4 574 aaPredicted RBP16.4■□□□□ 0.22
USB1-207ENST00000563149 LNPKQ9C0E8 428 aa16.39■□□□□ 0.21
USB1-207ENST00000563149 HMOX1P09601 288 aa16.38■□□□□ 0.21
USB1-207ENST00000563149 ZNF692Q9BU19 519 aaPredicted RBP16.38■□□□□ 0.21
USB1-207ENST00000563149 NRXN3Q9Y4C0 1643 aa16.38■□□□□ 0.21
USB1-207ENST00000563149 HAP1P54257 671 aaPredicted RBP16.38■□□□□ 0.21
USB1-207ENST00000563149 COG3Q96JB2 828 aa16.38■□□□□ 0.21
USB1-207ENST00000563149 MBIPQ9NS73 344 aa16.38■□□□□ 0.21
USB1-207ENST00000563149 CIZ1Q9ULV3 898 aaPredicted RBP16.38■□□□□ 0.21
USB1-207ENST00000563149 EMILIN1Q9Y6C2 1016 aa16.38■□□□□ 0.21
USB1-207ENST00000563149 TECPR2O15040 1411 aa16.38■□□□□ 0.21
USB1-207ENST00000563149 AKAP12Q02952 1782 aa16.37■□□□□ 0.21
USB1-207ENST00000563149 HDGFP51858 240 aaKnown RBP16.37■□□□□ 0.21
USB1-207ENST00000563149 TWISTNBQ3B726 338 aaPredicted RBP16.37■□□□□ 0.21
USB1-207ENST00000563149 ANKRD45Q5TZF3 282 aa16.37■□□□□ 0.21
USB1-207ENST00000563149 DIP2BQ9P265 1576 aa16.37■□□□□ 0.21
USB1-207ENST00000563149 DDX11L8A8MPP1 907 aa16.36■□□□□ 0.21
USB1-207ENST00000563149 CCDC61Q9Y6R9 512 aa16.36■□□□□ 0.21
USB1-207ENST00000563149 DLG5Q8TDM6 1919 aa16.36■□□□□ 0.21
USB1-207ENST00000563149 DDIT3P35638 169 aa16.36■□□□□ 0.21
USB1-207ENST00000563149 TSPYL6Q8N831 410 aa16.36■□□□□ 0.21
USB1-207ENST00000563149 NUDT16Q96DE0 195 aaKnown RBP16.36■□□□□ 0.21
USB1-207ENST00000563149 C3P01024 1663 aa16.35■□□□□ 0.21
USB1-207ENST00000563149 NME9Q86XW9 330 aa16.35■□□□□ 0.21
USB1-207ENST00000563149 CPS1P31327 1500 aa16.35■□□□□ 0.21
USB1-207ENST00000563149 ITSN1Q15811 1721 aa16.34■□□□□ 0.21
USB1-207ENST00000563149 PTMSP20962 102 aa16.34■□□□□ 0.21
USB1-207ENST00000563149 FBLN1P23142 703 aa16.34■□□□□ 0.21
USB1-207ENST00000563149 NRKQ7Z2Y5 1582 aa16.34■□□□□ 0.21
USB1-207ENST00000563149 FSD2A1L4K1 749 aa16.33■□□□□ 0.21
USB1-207ENST00000563149 GOLGA6L3A6NEY3 463 aa16.33■□□□□ 0.21
USB1-207ENST00000563149 FAM69CQ0P6D2 419 aa16.33■□□□□ 0.21
USB1-207ENST00000563149 SPRYD3Q8NCJ5 442 aa16.33■□□□□ 0.21
USB1-207ENST00000563149 ISY1Q9ULR0 285 aaKnown RBP16.33■□□□□ 0.21
USB1-207ENST00000563149 THUMPD2Q9BTF0 503 aaKnown RBP16.33■□□□□ 0.2
USB1-207ENST00000563149 TRAK2O60296 914 aa16.32■□□□□ 0.2
USB1-207ENST00000563149 METP08581 1390 aa16.32■□□□□ 0.2
USB1-207ENST00000563149 SIRT2Q8IXJ6 389 aa16.31■□□□□ 0.2
USB1-207ENST00000563149 C8orf58Q8NAV2 365 aa16.31■□□□□ 0.2
USB1-207ENST00000563149 INTS3Q68E01 1043 aaKnown RBP16.31■□□□□ 0.2
USB1-207ENST00000563149 CDC45O75419 566 aa16.3■□□□□ 0.2
USB1-207ENST00000563149 HSP90AB1P08238 724 aaKnown RBP16.3■□□□□ 0.2
USB1-207ENST00000563149 KIAA0232Q92628 1395 aa16.29■□□□□ 0.2
USB1-207ENST00000563149 TBC1D9Q6ZT07 1266 aa16.29■□□□□ 0.2
USB1-207ENST00000563149 TXNDC2Q86VQ3 553 aa16.29■□□□□ 0.2
USB1-207ENST00000563149 KIF2CQ99661 725 aa16.29■□□□□ 0.2
USB1-207ENST00000563149 DCTPP1Q9H773 170 aa16.29■□□□□ 0.2
USB1-207ENST00000563149 ELL2O00472 640 aaPredicted RBP16.28■□□□□ 0.2
USB1-207ENST00000563149 GBP4Q96PP9 640 aa16.28■□□□□ 0.2
USB1-207ENST00000563149 C1orf115Q9H7X2 142 aa16.28■□□□□ 0.2
USB1-207ENST00000563149 ZRANB1Q9UGI0 708 aa16.28■□□□□ 0.2
USB1-207ENST00000563149 SKOR2Q2VWA4 1001 aaPredicted RBP16.28■□□□□ 0.2
USB1-207ENST00000563149 RPAP2Q8IXW5 612 aaPredicted RBP16.28■□□□□ 0.2
USB1-207ENST00000563149 K7ELQ4 463 aaPredicted RBP16.27■□□□□ 0.2
USB1-207ENST00000563149 MRE11P49959 708 aa16.27■□□□□ 0.2
USB1-207ENST00000563149 RAB3GAP1Q15042 981 aa16.27■□□□□ 0.2
USB1-207ENST00000563149 RRS1Q15050 365 aaKnown RBP16.27■□□□□ 0.2
USB1-207ENST00000563149 CYB5RLQ6IPT4 315 aa16.27■□□□□ 0.2
USB1-207ENST00000563149 XRCC6P12956 609 aaKnown RBP eCLIP16.26■□□□□ 0.19
USB1-207ENST00000563149 ANKRD44Q8N8A2 993 aa16.26■□□□□ 0.19
USB1-207ENST00000563149 PTPRCP08575 1304 aa16.26■□□□□ 0.19
USB1-207ENST00000563149 TSPOAP1O95153 1857 aa16.26■□□□□ 0.19
USB1-207ENST00000563149 CHL1O00533 1208 aa16.26■□□□□ 0.19
USB1-207ENST00000563149 PLEKHM2Q8IWE5 1019 aa16.25■□□□□ 0.19
USB1-207ENST00000563149 TNPO1Q92973 898 aaKnown RBP16.25■□□□□ 0.19
USB1-207ENST00000563149 TTC21BQ7Z4L5 1316 aa16.24■□□□□ 0.19
USB1-207ENST00000563149 OVOS2A0A0J9YW53 1432 aa16.24■□□□□ 0.19
USB1-207ENST00000563149 PLEKHG3A1L390 1219 aa16.24■□□□□ 0.19
USB1-207ENST00000563149 FAM83GA6ND36 823 aa16.24■□□□□ 0.19
USB1-207ENST00000563149 EIF4A2Q14240 407 aaKnown RBP16.24■□□□□ 0.19
USB1-207ENST00000563149 OVOS2Q6IE36 1432 aa16.24■□□□□ 0.19
USB1-207ENST00000563149 ESF1Q9H501 851 aaKnown RBP16.24■□□□□ 0.19
USB1-207ENST00000563149 ANO8Q9HCE9 1232 aaPredicted RBP16.24■□□□□ 0.19
USB1-207ENST00000563149 TOPAZ1Q8N9V7 1692 aa16.24■□□□□ 0.19
USB1-207ENST00000563149 PRR36Q9H6K5 1346 aa16.24■□□□□ 0.19
USB1-207ENST00000563149 TTC22Q5TAA0 569 aa16.23■□□□□ 0.19
USB1-207ENST00000563149 NALCNQ8IZF0 1738 aa16.23■□□□□ 0.19
USB1-207ENST00000563149 CLEC17AQ6ZS10 378 aa16.23■□□□□ 0.19
USB1-207ENST00000563149 RGPD1P0DJD0 1748 aa16.23■□□□□ 0.19
USB1-207ENST00000563149 RGS12O14924 1447 aa16.22■□□□□ 0.19
USB1-207ENST00000563149 HSP90AA1P07900 732 aaKnown RBP16.22■□□□□ 0.19
USB1-207ENST00000563149 GSPT1P15170 499 aaKnown RBP16.22■□□□□ 0.19
USB1-207ENST00000563149 RABEP1Q15276 862 aa16.22■□□□□ 0.19
USB1-207ENST00000563149 SULT6B1Q6IMI4 303 aa16.22■□□□□ 0.19
USB1-207ENST00000563149 USP31Q70CQ4 1352 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 367.9 ms