RNA–Protein interactions for RNA: ENST00000561879.1

VAC14-203, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 2

Gene VAC14, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-203ENST00000561879 AKAP12Q02952 1782 aa14.14□□□□□ -0.15
VAC14-203ENST00000561879 MON2Q7Z3U7 1717 aa14.13□□□□□ -0.15
VAC14-203ENST00000561879 CHRDL2Q6WN34 429 aa14.13□□□□□ -0.15
VAC14-203ENST00000561879 PIP4P2Q8N4L2 257 aa14.12□□□□□ -0.15
VAC14-203ENST00000561879 MST1RQ04912 1400 aa14.12□□□□□ -0.15
VAC14-203ENST00000561879 USP31Q70CQ4 1352 aa14.11□□□□□ -0.15
VAC14-203ENST00000561879 PSME1Q06323 249 aa14.11□□□□□ -0.15
VAC14-203ENST00000561879 NME9Q86XW9 330 aa14.11□□□□□ -0.15
VAC14-203ENST00000561879 ZNF579Q8NAF0 562 aaKnown RBP14.11□□□□□ -0.15
VAC14-203ENST00000561879 COG3Q96JB2 828 aa14.11□□□□□ -0.15
VAC14-203ENST00000561879 ORAI2Q96SN7 254 aa14.11□□□□□ -0.15
VAC14-203ENST00000561879 INSRP06213 1382 aa14.1□□□□□ -0.15
VAC14-203ENST00000561879 AATKQ6ZMQ8 1374 aa14.1□□□□□ -0.15
VAC14-203ENST00000561879 RGPD8O14715 1765 aaPredicted RBP14.09□□□□□ -0.15
VAC14-203ENST00000561879 SLAIN2Q9P270 581 aa14.09□□□□□ -0.15
VAC14-203ENST00000561879 FOXO3O43524 673 aa14.08□□□□□ -0.16
VAC14-203ENST00000561879 PSEN1P49768 467 aa14.08□□□□□ -0.16
VAC14-203ENST00000561879 MTHFSP49914 203 aa14.08□□□□□ -0.16
VAC14-203ENST00000561879 CFAP53Q96M91 514 aa14.08□□□□□ -0.16
VAC14-203ENST00000561879 NRKQ7Z2Y5 1582 aa14.08□□□□□ -0.16
VAC14-203ENST00000561879 XIRP1Q702N8 1843 aaKnown RBP14.07□□□□□ -0.16
VAC14-203ENST00000561879 PAK3O75914 559 aaPredicted RBP14.07□□□□□ -0.16
VAC14-203ENST00000561879 FAM9BQ8IZU0 186 aa14.07□□□□□ -0.16
VAC14-203ENST00000561879 ANKRD26Q9UPS8 1709 aa14.07□□□□□ -0.16
VAC14-203ENST00000561879 OVOS2A0A0J9YW53 1432 aa14.07□□□□□ -0.16
VAC14-203ENST00000561879 OVOS2Q6IE36 1432 aa14.07□□□□□ -0.16
VAC14-203ENST00000561879 LTBP4Q8N2S1 1624 aa14.06□□□□□ -0.16
VAC14-203ENST00000561879 TNNT2P45379 298 aaPredicted RBP14.06□□□□□ -0.16
VAC14-203ENST00000561879 KRT28Q7Z3Y7 464 aa14.06□□□□□ -0.16
VAC14-203ENST00000561879 KIF1AQ12756 1690 aa14.06□□□□□ -0.16
VAC14-203ENST00000561879 NPHP3Q7Z494 1330 aa14.06□□□□□ -0.16
VAC14-203ENST00000561879 PNPLA6Q8IY17 1366 aa14.06□□□□□ -0.16
VAC14-203ENST00000561879 KIF20BQ96Q89 1820 aa14.06□□□□□ -0.16
VAC14-203ENST00000561879 ABTB2Q8N961 1025 aa14.05□□□□□ -0.16
VAC14-203ENST00000561879 POLKQ9UBT6 870 aa14.05□□□□□ -0.16
VAC14-203ENST00000561879 ZRANB1Q9UGI0 708 aa14.05□□□□□ -0.16
VAC14-203ENST00000561879 NLRP6P59044 892 aa14.04□□□□□ -0.16
VAC14-203ENST00000561879 TPRNQ4KMQ1 711 aa14.04□□□□□ -0.16
VAC14-203ENST00000561879 YTHDC1Q96MU7 727 aaKnown RBP14.04□□□□□ -0.16
VAC14-203ENST00000561879 NBR1Q14596 966 aa14.03□□□□□ -0.16
VAC14-203ENST00000561879 WDR43Q15061 677 aaKnown RBP eCLIP14.03□□□□□ -0.16
VAC14-203ENST00000561879 BRINP3Q76B58 766 aa14.03□□□□□ -0.16
VAC14-203ENST00000561879 IFNL1Q8IU54 200 aa14.03□□□□□ -0.16
VAC14-203ENST00000561879 SBNO1A3KN83 1393 aa14.03□□□□□ -0.16
VAC14-203ENST00000561879 SMG6Q86US8 1419 aaKnown RBP14.02□□□□□ -0.16
VAC14-203ENST00000561879 MAP3K13O43283 966 aa14.02□□□□□ -0.17
VAC14-203ENST00000561879 KIF12Q96FN5 646 aa14.02□□□□□ -0.17
VAC14-203ENST00000561879 CENPBP07199 599 aaPredicted RBP14.01□□□□□ -0.17
VAC14-203ENST00000561879 KCNH5Q8NCM2 988 aa14.01□□□□□ -0.17
VAC14-203ENST00000561879 ADAMTS8Q9UP79 889 aa14.01□□□□□ -0.17
VAC14-203ENST00000561879 NUDCQ9Y266 331 aa14.01□□□□□ -0.17
VAC14-203ENST00000561879 KIF24Q5T7B8 1368 aa14□□□□□ -0.17
VAC14-203ENST00000561879 SOS2Q07890 1332 aaPredicted RBP13.99□□□□□ -0.17
VAC14-203ENST00000561879 USP54Q70EL1 1684 aa13.99□□□□□ -0.17
VAC14-203ENST00000561879 MFRPQ9BY79 579 aa13.99□□□□□ -0.17
VAC14-203ENST00000561879 PIK3C2AO00443 1686 aa13.98□□□□□ -0.17
VAC14-203ENST00000561879 DIAPH1O60610 1272 aaKnown RBP13.98□□□□□ -0.17
VAC14-203ENST00000561879 HNRNPUQ00839 825 aaKnown RBP eCLIP13.98□□□□□ -0.17
VAC14-203ENST00000561879 USP19O94966 1318 aa13.97□□□□□ -0.17
VAC14-203ENST00000561879 SPATA31A3Q5VYP0 1347 aa13.97□□□□□ -0.17
VAC14-203ENST00000561879 FBLN1P23142 703 aa13.97□□□□□ -0.17
VAC14-203ENST00000561879 XPCQ01831 940 aaPredicted RBP13.97□□□□□ -0.17
VAC14-203ENST00000561879 NGEFQ8N5V2 710 aa13.97□□□□□ -0.17
VAC14-203ENST00000561879 EMILIN1Q9Y6C2 1016 aa13.97□□□□□ -0.17
VAC14-203ENST00000561879 CDK12Q9NYV4 1490 aaPredicted RBP13.97□□□□□ -0.17
VAC14-203ENST00000561879 BLMP54132 1417 aaPredicted RBP13.97□□□□□ -0.17
VAC14-203ENST00000561879 COL3A1P02461 1466 aaPredicted RBP13.96□□□□□ -0.17
VAC14-203ENST00000561879 PXDNQ92626 1479 aa13.96□□□□□ -0.17
VAC14-203ENST00000561879 RRS1Q15050 365 aaKnown RBP13.96□□□□□ -0.17
VAC14-203ENST00000561879 PNNQ9H307 717 aaKnown RBP13.96□□□□□ -0.17
VAC14-203ENST00000561879 ARHGEF10O15013 1369 aa13.96□□□□□ -0.18
VAC14-203ENST00000561879 TRPM3Q9HCF6 1732 aaPredicted RBP13.95□□□□□ -0.18
VAC14-203ENST00000561879 MAP3K19Q56UN5 1328 aa13.95□□□□□ -0.18
VAC14-203ENST00000561879 ZBED9Q6R2W3 1325 aa13.95□□□□□ -0.18
VAC14-203ENST00000561879 IQSEC2Q5JU85 1478 aa13.95□□□□□ -0.18
VAC14-203ENST00000561879 PPM1GO15355 546 aaPredicted RBP13.95□□□□□ -0.18
VAC14-203ENST00000561879 TOM1O60784 492 aa13.95□□□□□ -0.18
VAC14-203ENST00000561879 GCP02774 474 aa13.95□□□□□ -0.18
VAC14-203ENST00000561879 IL13P35225 146 aa13.95□□□□□ -0.18
VAC14-203ENST00000561879 NUTM2GQ5VZR2 741 aa13.95□□□□□ -0.18
VAC14-203ENST00000561879 TNS3Q68CZ2 1445 aa13.94□□□□□ -0.18
VAC14-203ENST00000561879 DDX17Q92841 729 aaKnown RBP13.94□□□□□ -0.18
VAC14-203ENST00000561879 MAP2P11137 1827 aaKnown RBP13.93□□□□□ -0.18
VAC14-203ENST00000561879 FCHSD2O94868 740 aa13.93□□□□□ -0.18
VAC14-203ENST00000561879 U2AF1L5P0DN76 240 aaPredicted RBP13.93□□□□□ -0.18
VAC14-203ENST00000561879 AMPHP49418 695 aa13.93□□□□□ -0.18
VAC14-203ENST00000561879 U2AF1Q01081 240 aaKnown RBP eCLIP13.93□□□□□ -0.18
VAC14-203ENST00000561879 SLIT3O75094 1523 aa13.93□□□□□ -0.18
VAC14-203ENST00000561879 FLT4P35916 1363 aa13.93□□□□□ -0.18
VAC14-203ENST00000561879 LMOD2Q6P5Q4 547 aa13.92□□□□□ -0.18
VAC14-203ENST00000561879 ARHGEF25Q86VW2 580 aa13.92□□□□□ -0.18
VAC14-203ENST00000561879 RUNDC1Q96C34 613 aa13.92□□□□□ -0.18
VAC14-203ENST00000561879 RTL1A6NKG5 1358 aa13.92□□□□□ -0.18
VAC14-203ENST00000561879 ALS2Q96Q42 1657 aa13.91□□□□□ -0.18
VAC14-203ENST00000561879 CD44P16070 742 aaKnown RBP13.91□□□□□ -0.18
VAC14-203ENST00000561879 HSP90AB2PQ58FF8 381 aa13.91□□□□□ -0.18
VAC14-203ENST00000561879 IP6K1Q92551 441 aa13.91□□□□□ -0.18
VAC14-203ENST00000561879 NFAT5O94916 1531 aa13.9□□□□□ -0.18
VAC14-203ENST00000561879 MARF1Q9Y4F3 1742 aaKnown RBP13.9□□□□□ -0.18
VAC14-203ENST00000561879 U2SURPO15042 1029 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms