RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 RBM25P49756 843 aaKnown RBP9.14□□□□□ -0.95
CDH1-203ENST00000561751 BCAMP50895 628 aa9.14□□□□□ -0.95
CDH1-203ENST00000561751 ATP1B4Q9UN42 357 aaPredicted RBP9.14□□□□□ -0.95
CDH1-203ENST00000561751 LMTK3Q96Q04 1460 aa9.14□□□□□ -0.95
CDH1-203ENST00000561751 ARHGAP31Q2M1Z3 1444 aa9.14□□□□□ -0.95
CDH1-203ENST00000561751 ABCA8O94911 1581 aa9.13□□□□□ -0.95
CDH1-203ENST00000561751 EN1Q05925 392 aaPredicted RBP9.13□□□□□ -0.95
CDH1-203ENST00000561751 E2F4Q16254 413 aa9.13□□□□□ -0.95
CDH1-203ENST00000561751 CRBNQ96SW2 442 aa9.13□□□□□ -0.95
CDH1-203ENST00000561751 SEPT9Q9UHD8 586 aaPredicted RBP9.13□□□□□ -0.95
CDH1-203ENST00000561751 NOL7Q9UMY1 257 aaKnown RBP9.13□□□□□ -0.95
CDH1-203ENST00000561751 EFCAB5A4FU69 1503 aa9.13□□□□□ -0.95
CDH1-203ENST00000561751 ERBB4Q15303 1308 aa9.12□□□□□ -0.95
CDH1-203ENST00000561751 IFFO2Q5TF58 517 aa9.12□□□□□ -0.95
CDH1-203ENST00000561751 SASS6Q6UVJ0 657 aa9.12□□□□□ -0.95
CDH1-203ENST00000561751 LAPTM4BQ86VI4 370 aa9.12□□□□□ -0.95
CDH1-203ENST00000561751 NLRP13Q86W25 1043 aa9.12□□□□□ -0.95
CDH1-203ENST00000561751 FTSJ3Q8IY81 847 aaKnown RBP9.12□□□□□ -0.95
CDH1-203ENST00000561751 NGEFQ8N5V2 710 aa9.12□□□□□ -0.95
CDH1-203ENST00000561751 ZFRQ96KR1 1074 aaKnown RBP9.12□□□□□ -0.95
CDH1-203ENST00000561751 GCC2Q8IWJ2 1684 aa9.12□□□□□ -0.95
CDH1-203ENST00000561751 BLMP54132 1417 aaPredicted RBP9.12□□□□□ -0.95
CDH1-203ENST00000561751 SAMD9Q5K651 1589 aa9.12□□□□□ -0.95
CDH1-203ENST00000561751 SOWAHBA6NEL2 793 aa9.11□□□□□ -0.95
CDH1-203ENST00000561751 CLEC17AQ6ZS10 378 aa9.11□□□□□ -0.95
CDH1-203ENST00000561751 ANKK1Q8NFD2 765 aa9.11□□□□□ -0.95
CDH1-203ENST00000561751 L3MBTL2Q969R5 705 aa9.11□□□□□ -0.95
CDH1-203ENST00000561751 TBC1D32Q96NH3 1257 aa9.11□□□□□ -0.95
CDH1-203ENST00000561751 PANK2Q9BZ23 570 aa9.11□□□□□ -0.95
CDH1-203ENST00000561751 TMEM51Q9NW97 253 aa9.11□□□□□ -0.95
CDH1-203ENST00000561751 ARIH1Q9Y4X5 557 aaPredicted RBP9.11□□□□□ -0.95
CDH1-203ENST00000561751 MADDQ8WXG6 1647 aa9.11□□□□□ -0.95
CDH1-203ENST00000561751 KIAA1107Q9UPP5 1409 aa9.11□□□□□ -0.95
CDH1-203ENST00000561751 ATP10BO94823 1461 aa9.1□□□□□ -0.95
CDH1-203ENST00000561751 TCOF1Q13428 1488 aaKnown RBP9.1□□□□□ -0.95
CDH1-203ENST00000561751 PLEKHD1A6NEE1 506 aa9.1□□□□□ -0.95
CDH1-203ENST00000561751 SPDYE16A6NNV3 312 aaPredicted RBP9.1□□□□□ -0.95
CDH1-203ENST00000561751 HMGN5P82970 282 aaKnown RBP9.1□□□□□ -0.95
CDH1-203ENST00000561751 PRIMPOLQ96LW4 560 aa9.1□□□□□ -0.95
CDH1-203ENST00000561751 TSKSQ9UJT2 592 aa9.1□□□□□ -0.95
CDH1-203ENST00000561751 BCORL1Q5H9F3 1711 aa9.1□□□□□ -0.95
CDH1-203ENST00000561751 ANKRD30AQ9BXX3 1397 aa9.1□□□□□ -0.95
CDH1-203ENST00000561751 NLRP1Q9C000 1473 aa9.09□□□□□ -0.95
CDH1-203ENST00000561751 MAP3K7O43318 606 aa9.09□□□□□ -0.95
CDH1-203ENST00000561751 GTF2F1P35269 517 aaKnown RBP eCLIP9.09□□□□□ -0.95
CDH1-203ENST00000561751 GBP4Q96PP9 640 aa9.09□□□□□ -0.95
CDH1-203ENST00000561751 ANKRD30BQ9BXX2 1392 aa9.09□□□□□ -0.95
CDH1-203ENST00000561751 ABCA9Q8IUA7 1624 aa9.09□□□□□ -0.95
CDH1-203ENST00000561751 DENND4BO75064 1496 aaPredicted RBP9.08□□□□□ -0.96
CDH1-203ENST00000561751 FRMPD1Q5SYB0 1578 aa9.08□□□□□ -0.96
CDH1-203ENST00000561751 NCOA3Q9Y6Q9 1424 aa9.08□□□□□ -0.96
CDH1-203ENST00000561751 HSP90AB1P08238 724 aaKnown RBP9.08□□□□□ -0.96
CDH1-203ENST00000561751 CREBRFQ8IUR6 639 aa9.08□□□□□ -0.96
CDH1-203ENST00000561751 TEX2Q8IWB9 1127 aa9.08□□□□□ -0.96
CDH1-203ENST00000561751 TSPYL1Q9H0U9 437 aa9.08□□□□□ -0.96
CDH1-203ENST00000561751 FAM13BQ9NYF5 915 aa9.08□□□□□ -0.96
CDH1-203ENST00000561751 UHRF1BP1Q6BDS2 1440 aa9.07□□□□□ -0.96
CDH1-203ENST00000561751 A0A0G2JS52 829 aa9.07□□□□□ -0.96
CDH1-203ENST00000561751 DDIT3P35638 169 aa9.07□□□□□ -0.96
CDH1-203ENST00000561751 SNX21Q969T3 373 aa9.07□□□□□ -0.96
CDH1-203ENST00000561751 PDLIM2Q96JY6 352 aa9.07□□□□□ -0.96
CDH1-203ENST00000561751 TBC1D2Q9BYX2 928 aa9.07□□□□□ -0.96
CDH1-203ENST00000561751 FAM198AQ9UFP1 575 aa9.07□□□□□ -0.96
CDH1-203ENST00000561751 PARD3Q8TEW0 1356 aa9.07□□□□□ -0.96
CDH1-203ENST00000561751 CGNL1Q0VF96 1302 aa9.06□□□□□ -0.96
CDH1-203ENST00000561751 PTPRKQ15262 1439 aa9.06□□□□□ -0.96
CDH1-203ENST00000561751 ARHGEF40Q8TER5 1519 aa9.06□□□□□ -0.96
CDH1-203ENST00000561751 UQCRHLA0A096LP55 91 aa9.06□□□□□ -0.96
CDH1-203ENST00000561751 GRXCR2A6NFK2 248 aa9.06□□□□□ -0.96
CDH1-203ENST00000561751 UQCRHP07919 91 aa9.06□□□□□ -0.96
CDH1-203ENST00000561751 ZNF445P59923 1031 aa9.06□□□□□ -0.96
CDH1-203ENST00000561751 PDE3AQ14432 1141 aa9.06□□□□□ -0.96
CDH1-203ENST00000561751 FAM98CQ17RN3 349 aaKnown RBP9.06□□□□□ -0.96
CDH1-203ENST00000561751 FEZ1Q99689 392 aa9.06□□□□□ -0.96
CDH1-203ENST00000561751 WBP1LQ9NX94 342 aa9.06□□□□□ -0.96
CDH1-203ENST00000561751 ROCK1Q13464 1354 aa9.06□□□□□ -0.96
CDH1-203ENST00000561751 NEO1Q92859 1461 aa9.06□□□□□ -0.96
CDH1-203ENST00000561751 MBD5Q9P267 1494 aa9.06□□□□□ -0.96
CDH1-203ENST00000561751 NUP153P49790 1475 aaKnown RBP9.05□□□□□ -0.96
CDH1-203ENST00000561751 MTUS2Q5JR59 1369 aa9.05□□□□□ -0.96
CDH1-203ENST00000561751 C3orf80F5H4A9 247 aa9.05□□□□□ -0.96
CDH1-203ENST00000561751 MYRIPQ8NFW9 859 aa9.05□□□□□ -0.96
CDH1-203ENST00000561751 DNAJC2Q99543 621 aaKnown RBP9.05□□□□□ -0.96
CDH1-203ENST00000561751 MPHOSPH9Q99550 1183 aa9.05□□□□□ -0.96
CDH1-203ENST00000561751 WDR70Q9NW82 654 aa9.05□□□□□ -0.96
CDH1-203ENST00000561751 RIMS1Q86UR5 1692 aaKnown RBP9.04□□□□□ -0.96
CDH1-203ENST00000561751 CAMSAP2Q08AD1 1489 aa9.04□□□□□ -0.96
CDH1-203ENST00000561751 ITGBL1O95965 494 aaPredicted RBP9.04□□□□□ -0.96
CDH1-203ENST00000561751 OSBPP22059 807 aa9.04□□□□□ -0.96
CDH1-203ENST00000561751 NASPP49321 788 aaPredicted RBP9.04□□□□□ -0.96
CDH1-203ENST00000561751 NBPF8Q3BBV2 869 aa9.04□□□□□ -0.96
CDH1-203ENST00000561751 SMC5Q8IY18 1101 aa9.04□□□□□ -0.96
CDH1-203ENST00000561751 SLKQ9H2G2 1235 aaPredicted RBP9.04□□□□□ -0.96
CDH1-203ENST00000561751 ZKSCAN5Q9Y2L8 839 aa9.04□□□□□ -0.96
CDH1-203ENST00000561751 RAPGEF6Q8TEU7 1601 aa9.04□□□□□ -0.96
CDH1-203ENST00000561751 GOLGA6L22H0YM25 854 aa9.03□□□□□ -0.96
CDH1-203ENST00000561751 RAPGEF3O95398 923 aa9.03□□□□□ -0.96
CDH1-203ENST00000561751 BRD2P25440 801 aaKnown RBP9.03□□□□□ -0.96
CDH1-203ENST00000561751 GABPB1Q06547 395 aaPredicted RBP9.03□□□□□ -0.96
CDH1-203ENST00000561751 TRMT2AQ8IZ69 625 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms