RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 ELL2O00472 640 aaPredicted RBP12.37□□□□□ -0.43
SNX22-206ENST00000560997 IL13P35225 146 aa12.37□□□□□ -0.43
SNX22-206ENST00000560997 EDC4Q6P2E9 1401 aaKnown RBP12.37□□□□□ -0.43
SNX22-206ENST00000560997 SPRYD3Q8NCJ5 442 aa12.36□□□□□ -0.43
SNX22-206ENST00000560997 VAMP4O75379 141 aa12.36□□□□□ -0.43
SNX22-206ENST00000560997 MAPK8IP2Q13387 824 aaPredicted RBP12.36□□□□□ -0.43
SNX22-206ENST00000560997 RRS1Q15050 365 aaKnown RBP12.36□□□□□ -0.43
SNX22-206ENST00000560997 C22orf23Q9BZE7 217 aa12.36□□□□□ -0.43
SNX22-206ENST00000560997 CPS1P31327 1500 aa12.36□□□□□ -0.43
SNX22-206ENST00000560997 LNPKQ9C0E8 428 aa12.36□□□□□ -0.43
SNX22-206ENST00000560997 C1orf115Q9H7X2 142 aa12.35□□□□□ -0.43
SNX22-206ENST00000560997 MRPL50Q8N5N7 158 aaKnown RBP12.35□□□□□ -0.43
SNX22-206ENST00000560997 NUDT16Q96DE0 195 aaKnown RBP12.35□□□□□ -0.43
SNX22-206ENST00000560997 MBIPQ9NS73 344 aa12.35□□□□□ -0.43
SNX22-206ENST00000560997 CDK12Q9NYV4 1490 aaPredicted RBP12.35□□□□□ -0.43
SNX22-206ENST00000560997 NUCB1Q02818 461 aa12.35□□□□□ -0.43
SNX22-206ENST00000560997 DLG5Q8TDM6 1919 aa12.34□□□□□ -0.43
SNX22-206ENST00000560997 FAM83GA6ND36 823 aa12.34□□□□□ -0.43
SNX22-206ENST00000560997 BRPF1P55201 1214 aaPredicted RBP12.33□□□□□ -0.43
SNX22-206ENST00000560997 ZBTB7BO15156 539 aaPredicted RBP12.33□□□□□ -0.44
SNX22-206ENST00000560997 ZNF853P0CG23 659 aa12.33□□□□□ -0.44
SNX22-206ENST00000560997 IFT57Q9NWB7 429 aa12.33□□□□□ -0.44
SNX22-206ENST00000560997 GNAI1P63096 354 aa12.33□□□□□ -0.44
SNX22-206ENST00000560997 DCTN1Q14203 1278 aa12.33□□□□□ -0.44
SNX22-206ENST00000560997 COG3Q96JB2 828 aa12.33□□□□□ -0.44
SNX22-206ENST00000560997 PTCH1Q13635 1447 aa12.32□□□□□ -0.44
SNX22-206ENST00000560997 CHD1LQ86WJ1 897 aa12.32□□□□□ -0.44
SNX22-206ENST00000560997 ZNF428Q96B54 188 aa12.32□□□□□ -0.44
SNX22-206ENST00000560997 MON2Q7Z3U7 1717 aa12.32□□□□□ -0.44
SNX22-206ENST00000560997 AATKQ6ZMQ8 1374 aa12.32□□□□□ -0.44
SNX22-206ENST00000560997 C8orf58Q8NAV2 365 aa12.32□□□□□ -0.44
SNX22-206ENST00000560997 PRR36Q9H6K5 1346 aa12.32□□□□□ -0.44
SNX22-206ENST00000560997 CCDC61Q9Y6R9 512 aa12.32□□□□□ -0.44
SNX22-206ENST00000560997 CALD1Q05682 793 aaKnown RBP12.31□□□□□ -0.44
SNX22-206ENST00000560997 TWISTNBQ3B726 338 aaPredicted RBP12.31□□□□□ -0.44
SNX22-206ENST00000560997 PIK3R4Q99570 1358 aa12.31□□□□□ -0.44
SNX22-206ENST00000560997 KIF13AQ9H1H9 1805 aa12.3□□□□□ -0.44
SNX22-206ENST00000560997 ANKRD45Q5TZF3 282 aa12.3□□□□□ -0.44
SNX22-206ENST00000560997 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNX22-206ENST00000560997 C3P01024 1663 aa12.3□□□□□ -0.44
SNX22-206ENST00000560997 SIRT2Q8IXJ6 389 aa12.3□□□□□ -0.44
SNX22-206ENST00000560997 CNKSR2Q8WXI2 1034 aa12.3□□□□□ -0.44
SNX22-206ENST00000560997 ARHGAP45Q92619 1136 aa12.3□□□□□ -0.44
SNX22-206ENST00000560997 ABCC4O15439 1325 aa12.3□□□□□ -0.44
SNX22-206ENST00000560997 CFAP44Q96MT7 982 aa12.3□□□□□ -0.44
SNX22-206ENST00000560997 AKAP12Q02952 1782 aa12.3□□□□□ -0.44
SNX22-206ENST00000560997 AEBP1Q8IUX7 1158 aa12.29□□□□□ -0.44
SNX22-206ENST00000560997 KNDC1Q76NI1 1749 aa12.29□□□□□ -0.44
SNX22-206ENST00000560997 ITSN1Q15811 1721 aa12.29□□□□□ -0.44
SNX22-206ENST00000560997 TECPR2O15040 1411 aa12.28□□□□□ -0.44
SNX22-206ENST00000560997 NUTM2FA1L443 756 aa12.28□□□□□ -0.44
SNX22-206ENST00000560997 ROBO2Q9HCK4 1378 aa12.28□□□□□ -0.44
SNX22-206ENST00000560997 ESF1Q9H501 851 aaKnown RBP12.28□□□□□ -0.44
SNX22-206ENST00000560997 LMOD3Q0VAK6 560 aa12.27□□□□□ -0.45
SNX22-206ENST00000560997 KRT24Q2M2I5 525 aa12.27□□□□□ -0.45
SNX22-206ENST00000560997 BMP2KLQ5H9B9 411 aa12.27□□□□□ -0.45
SNX22-206ENST00000560997 EIF4A2Q14240 407 aaKnown RBP12.27□□□□□ -0.45
SNX22-206ENST00000560997 GCC1Q96CN9 775 aa12.27□□□□□ -0.45
SNX22-206ENST00000560997 RBM25P49756 843 aaKnown RBP12.26□□□□□ -0.45
SNX22-206ENST00000560997 SULT6B1Q6IMI4 303 aa12.26□□□□□ -0.45
SNX22-206ENST00000560997 HSCBQ8IWL3 235 aa12.26□□□□□ -0.45
SNX22-206ENST00000560997 NRKQ7Z2Y5 1582 aa12.25□□□□□ -0.45
SNX22-206ENST00000560997 TNRQ92752 1358 aa12.25□□□□□ -0.45
SNX22-206ENST00000560997 SIRT1Q96EB6 747 aa12.25□□□□□ -0.45
SNX22-206ENST00000560997 CHMP5Q9NZZ3 219 aa12.25□□□□□ -0.45
SNX22-206ENST00000560997 ZNF692Q9BU19 519 aaPredicted RBP12.25□□□□□ -0.45
SNX22-206ENST00000560997 CHMP4BQ9H444 224 aaKnown RBP12.25□□□□□ -0.45
SNX22-206ENST00000560997 TTC21BQ7Z4L5 1316 aa12.25□□□□□ -0.45
SNX22-206ENST00000560997 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.24□□□□□ -0.45
SNX22-206ENST00000560997 MCM4P33991 863 aa12.24□□□□□ -0.45
SNX22-206ENST00000560997 API5Q9BZZ5 524 aaKnown RBP12.24□□□□□ -0.45
SNX22-206ENST00000560997 TMEM2Q9UHN6 1383 aa12.24□□□□□ -0.45
SNX22-206ENST00000560997 SOX12O15370 315 aa12.24□□□□□ -0.45
SNX22-206ENST00000560997 MCM10Q7L590 875 aa12.24□□□□□ -0.45
SNX22-206ENST00000560997 ACEP12821 1306 aa12.24□□□□□ -0.45
SNX22-206ENST00000560997 TBC1D9Q6ZT07 1266 aa12.24□□□□□ -0.45
SNX22-206ENST00000560997 ADAMTS13Q76LX8 1427 aa12.24□□□□□ -0.45
SNX22-206ENST00000560997 UBR1Q8IWV7 1749 aa12.23□□□□□ -0.45
SNX22-206ENST00000560997 HDGFP51858 240 aaKnown RBP12.23□□□□□ -0.45
SNX22-206ENST00000560997 HSP90AB2PQ58FF8 381 aa12.23□□□□□ -0.45
SNX22-206ENST00000560997 KIF2CQ99661 725 aa12.23□□□□□ -0.45
SNX22-206ENST00000560997 PEAK1Q9H792 1746 aa12.23□□□□□ -0.45
SNX22-206ENST00000560997 OVOS2A0A0J9YW53 1432 aa12.22□□□□□ -0.45
SNX22-206ENST00000560997 OVOS2Q6IE36 1432 aa12.22□□□□□ -0.45
SNX22-206ENST00000560997 NCOA3Q9Y6Q9 1424 aa12.22□□□□□ -0.45
SNX22-206ENST00000560997 ARXQ96QS3 562 aa12.22□□□□□ -0.45
SNX22-206ENST00000560997 RGS12O14924 1447 aa12.22□□□□□ -0.45
SNX22-206ENST00000560997 LTKP29376 864 aa12.22□□□□□ -0.45
SNX22-206ENST00000560997 CD2BP2O95400 341 aaKnown RBP12.21□□□□□ -0.45
SNX22-206ENST00000560997 GZF1Q9H116 711 aaPredicted RBP12.21□□□□□ -0.45
SNX22-206ENST00000560997 TOPAZ1Q8N9V7 1692 aa12.21□□□□□ -0.45
SNX22-206ENST00000560997 GSPT1P15170 499 aaKnown RBP12.21□□□□□ -0.45
SNX22-206ENST00000560997 SNX21Q969T3 373 aa12.21□□□□□ -0.45
SNX22-206ENST00000560997 DDIT3P35638 169 aa12.21□□□□□ -0.46
SNX22-206ENST00000560997 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.46
SNX22-206ENST00000560997 USP6P35125 1406 aa12.21□□□□□ -0.46
SNX22-206ENST00000560997 CHL1O00533 1208 aa12.2□□□□□ -0.46
SNX22-206ENST00000560997 INTS3Q68E01 1043 aaKnown RBP12.2□□□□□ -0.46
SNX22-206ENST00000560997 C16orf71Q8IYS4 520 aaPredicted RBP12.2□□□□□ -0.46
SNX22-206ENST00000560997 SLC26A8Q96RN1 970 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms