RNA–Protein interactions for RNA: ENST00000560731.5

MARK3-222, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-222	ENST00000560731	TSPOAP1	O95153	1857 aa		10.97	□□□□□ -0.65
MARK3-222	ENST00000560731	BCORL1	Q5H9F3	1711 aa		10.96	□□□□□ -0.65
MARK3-222	ENST00000560731	ABCA6	Q8N139	1617 aa		10.96	□□□□□ -0.65
MARK3-222	ENST00000560731	MROH1	Q8NDA8	1641 aa		10.96	□□□□□ -0.65
MARK3-222	ENST00000560731	DIP2C	Q9Y2E4	1556 aa		10.96	□□□□□ -0.65
MARK3-222	ENST00000560731	PRDM15	P57071	1507 aa	Predicted RBP	10.96	□□□□□ -0.65
MARK3-222	ENST00000560731	LMTK2	Q8IWU2	1503 aa		10.96	□□□□□ -0.65
MARK3-222	ENST00000560731	RGS20	O76081	388 aa		10.96	□□□□□ -0.65
MARK3-222	ENST00000560731	RNF17	Q9BXT8	1623 aa	Known RBP	10.95	□□□□□ -0.66
MARK3-222	ENST00000560731	PDE4D	Q08499	809 aa		10.95	□□□□□ -0.66
MARK3-222	ENST00000560731	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.95	□□□□□ -0.66
MARK3-222	ENST00000560731	FECH	P22830	423 aa		10.94	□□□□□ -0.66
MARK3-222	ENST00000560731	NBPF8	Q3BBV2	869 aa		10.94	□□□□□ -0.66
MARK3-222	ENST00000560731	GGT6	Q6P531	493 aa		10.94	□□□□□ -0.66
MARK3-222	ENST00000560731	CCDC102A	Q96A19	550 aa		10.94	□□□□□ -0.66
MARK3-222	ENST00000560731	CCDC144A	A2RUR9	1427 aa		10.93	□□□□□ -0.66
MARK3-222	ENST00000560731	TET3	O43151	1660 aa		10.93	□□□□□ -0.66
MARK3-222	ENST00000560731		A0A0G2JS52	829 aa		10.93	□□□□□ -0.66
MARK3-222	ENST00000560731	IRF6	O14896	467 aa		10.93	□□□□□ -0.66
MARK3-222	ENST00000560731	SLC4A3	P48751	1232 aa		10.93	□□□□□ -0.66
MARK3-222	ENST00000560731	KCNC4	Q03721	635 aa		10.93	□□□□□ -0.66
MARK3-222	ENST00000560731	WASHC2C	Q9Y4E1	1318 aa		10.92	□□□□□ -0.66
MARK3-222	ENST00000560731	RERE	Q9P2R6	1566 aa		10.92	□□□□□ -0.66
MARK3-222	ENST00000560731	EYA1	Q99502	592 aa		10.92	□□□□□ -0.66
MARK3-222	ENST00000560731	UHRF1BP1	Q6BDS2	1440 aa		10.92	□□□□□ -0.66
MARK3-222	ENST00000560731		E9PCH4	1651 aa		10.92	□□□□□ -0.66
MARK3-222	ENST00000560731	AGL	P35573	1532 aa		10.91	□□□□□ -0.66
MARK3-222	ENST00000560731	DIEXF	Q68CQ4	756 aa	Known RBP	10.91	□□□□□ -0.66
MARK3-222	ENST00000560731	SLF2	Q8IX21	1173 aa		10.9	□□□□□ -0.66
MARK3-222	ENST00000560731	RBM46	Q8TBY0	533 aa	Known RBP	10.9	□□□□□ -0.66
MARK3-222	ENST00000560731	KDM4C	Q9H3R0	1056 aa		10.9	□□□□□ -0.66
MARK3-222	ENST00000560731	DCAF11	Q8TEB1	546 aa		10.89	□□□□□ -0.67
MARK3-222	ENST00000560731	ARHGAP31	Q2M1Z3	1444 aa		10.89	□□□□□ -0.67
MARK3-222	ENST00000560731	ABCC3	O15438	1527 aa		10.89	□□□□□ -0.67
MARK3-222	ENST00000560731	TRPM2	O94759	1503 aa		10.89	□□□□□ -0.67
MARK3-222	ENST00000560731	EFCAB6	Q5THR3	1501 aa		10.89	□□□□□ -0.67
MARK3-222	ENST00000560731	AMHR2	Q16671	573 aa		10.88	□□□□□ -0.67
MARK3-222	ENST00000560731	SWT1	Q5T5J6	900 aa	Known RBP	10.88	□□□□□ -0.67
MARK3-222	ENST00000560731	SPATA31E1	Q6ZUB1	1445 aa		10.88	□□□□□ -0.67
MARK3-222	ENST00000560731	NPAT	Q14207	1427 aa		10.87	□□□□□ -0.67
MARK3-222	ENST00000560731	RNF40	O75150	1001 aa		10.87	□□□□□ -0.67
MARK3-222	ENST00000560731	RGL3	Q3MIN7	710 aa		10.87	□□□□□ -0.67
MARK3-222	ENST00000560731	HSPA5	P11021	654 aa	Known RBP	10.86	□□□□□ -0.67
MARK3-222	ENST00000560731	DNAJB2	P25686	324 aa		10.86	□□□□□ -0.67
MARK3-222	ENST00000560731	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
MARK3-222	ENST00000560731	ADGRG1	Q9Y653	693 aa		10.86	□□□□□ -0.67
MARK3-222	ENST00000560731	NEURL4	Q96JN8	1562 aa		10.86	□□□□□ -0.67
MARK3-222	ENST00000560731	NOS1	P29475	1434 aa		10.85	□□□□□ -0.67
MARK3-222	ENST00000560731	SPHKAP	Q2M3C7	1700 aa		10.85	□□□□□ -0.67
MARK3-222	ENST00000560731	CNTLN	Q9NXG0	1405 aa		10.84	□□□□□ -0.67
MARK3-222	ENST00000560731	ARHGEF40	Q8TER5	1519 aa		10.84	□□□□□ -0.67
MARK3-222	ENST00000560731	DAXX	Q9UER7	740 aa	Predicted RBP	10.84	□□□□□ -0.67
MARK3-222	ENST00000560731	CEP152	O94986	1710 aa		10.84	□□□□□ -0.67
MARK3-222	ENST00000560731	OAT	P04181	439 aa		10.83	□□□□□ -0.68
MARK3-222	ENST00000560731	TJAP1	Q5JTD0	557 aa		10.83	□□□□□ -0.68
MARK3-222	ENST00000560731	PARP9	Q8IXQ6	854 aa		10.83	□□□□□ -0.68
MARK3-222	ENST00000560731	PRR14	Q9BWN1	585 aa		10.83	□□□□□ -0.68
MARK3-222	ENST00000560731	CLTCL1	P53675	1640 aa		10.83	□□□□□ -0.68
MARK3-222	ENST00000560731	PRAG1	Q86YV5	1406 aa		10.83	□□□□□ -0.68
MARK3-222	ENST00000560731	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.82	□□□□□ -0.68
MARK3-222	ENST00000560731	IL21	Q9HBE4	155 aa		10.82	□□□□□ -0.68
MARK3-222	ENST00000560731	SLC52A1	Q9NWF4	448 aa		10.82	□□□□□ -0.68
MARK3-222	ENST00000560731	ZC3H13	Q5T200	1668 aa	Known RBP	10.82	□□□□□ -0.68
MARK3-222	ENST00000560731	RALGAPB	Q86X10	1494 aa		10.81	□□□□□ -0.68
MARK3-222	ENST00000560731	CAMSAP1	Q5T5Y3	1602 aa		10.81	□□□□□ -0.68
MARK3-222	ENST00000560731	APLP1	P51693	650 aa		10.81	□□□□□ -0.68
MARK3-222	ENST00000560731	ZNF326	Q5BKZ1	582 aa	Known RBP	10.81	□□□□□ -0.68
MARK3-222	ENST00000560731	IL27	Q8NEV9	243 aa		10.81	□□□□□ -0.68
MARK3-222	ENST00000560731	TMEM134	Q9H6X4	195 aa		10.81	□□□□□ -0.68
MARK3-222	ENST00000560731	RPGRIP1L	Q68CZ1	1315 aa		10.81	□□□□□ -0.68
MARK3-222	ENST00000560731	MTR	Q99707	1265 aa		10.8	□□□□□ -0.68
MARK3-222	ENST00000560731	GPRASP1	Q5JY77	1395 aa		10.79	□□□□□ -0.68
MARK3-222	ENST00000560731	SIGLEC1	Q9BZZ2	1709 aa		10.79	□□□□□ -0.68
MARK3-222	ENST00000560731	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.79	□□□□□ -0.68
MARK3-222	ENST00000560731	RCCD1	A6NED2	376 aa		10.79	□□□□□ -0.68
MARK3-222	ENST00000560731	IDI1	Q13907	227 aa		10.79	□□□□□ -0.68
MARK3-222	ENST00000560731	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.79	□□□□□ -0.68
MARK3-222	ENST00000560731	CARD11	Q9BXL7	1154 aa		10.79	□□□□□ -0.68
MARK3-222	ENST00000560731	MLEC	Q14165	292 aa		10.78	□□□□□ -0.68
MARK3-222	ENST00000560731	NBPF1	Q3BBV0	1214 aa		10.78	□□□□□ -0.68
MARK3-222	ENST00000560731	UGGT1	Q9NYU2	1555 aa		10.77	□□□□□ -0.68
MARK3-222	ENST00000560731	C11orf95	C9JLR9	678 aa	Predicted RBP	10.77	□□□□□ -0.69
MARK3-222	ENST00000560731	TTLL12	Q14166	644 aa	Predicted RBP	10.77	□□□□□ -0.69
MARK3-222	ENST00000560731	FAM117A	Q9C073	453 aa		10.77	□□□□□ -0.69
MARK3-222	ENST00000560731	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.77	□□□□□ -0.69
MARK3-222	ENST00000560731	SYNM	O15061	1565 aa		10.77	□□□□□ -0.69
MARK3-222	ENST00000560731	ROCK2	O75116	1388 aa	Known RBP	10.77	□□□□□ -0.69
MARK3-222	ENST00000560731	ZMYM3	Q14202	1370 aa		10.77	□□□□□ -0.69
MARK3-222	ENST00000560731	USP47	Q96K76	1375 aa		10.77	□□□□□ -0.69
MARK3-222	ENST00000560731	ADGRB3	O60242	1522 aa		10.76	□□□□□ -0.69
MARK3-222	ENST00000560731	DDX10	Q13206	875 aa	Known RBP	10.76	□□□□□ -0.69
MARK3-222	ENST00000560731	ERICH6	Q7L0X2	663 aa		10.76	□□□□□ -0.69
MARK3-222	ENST00000560731	PXYLP1	Q8TE99	480 aa		10.76	□□□□□ -0.69
MARK3-222	ENST00000560731	ESF1	Q9H501	851 aa	Known RBP	10.76	□□□□□ -0.69
MARK3-222	ENST00000560731	KIF1B	O60333	1816 aa		10.76	□□□□□ -0.69
MARK3-222	ENST00000560731	PIK3C2B	O00750	1634 aa		10.76	□□□□□ -0.69
MARK3-222	ENST00000560731	CFAP65	Q6ZU64	1925 aa	Known RBP	10.76	□□□□□ -0.69
MARK3-222	ENST00000560731	ERVK-7	P63135	1459 aa		10.75	□□□□□ -0.69
MARK3-222	ENST00000560731	FAM161A	Q3B820	660 aa		10.75	□□□□□ -0.69
MARK3-222	ENST00000560731	TRPM1	Q7Z4N2	1603 aa		10.75	□□□□□ -0.69

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