RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 ANKRD36BQ8N2N9 1353 aa11.03□□□□□ -0.64
CCDC33-209ENST00000560565 BLMP54132 1417 aaPredicted RBP11.02□□□□□ -0.64
CCDC33-209ENST00000560565 CAPN15O75808 1086 aa11.02□□□□□ -0.65
CCDC33-209ENST00000560565 PLEKHG5O94827 1062 aa11.02□□□□□ -0.65
CCDC33-209ENST00000560565 FAM161AQ3B820 660 aa11.02□□□□□ -0.65
CCDC33-209ENST00000560565 QTRT2Q9H974 415 aaKnown RBP11.02□□□□□ -0.65
CCDC33-209ENST00000560565 KNSTRNQ9Y448 316 aa11.02□□□□□ -0.65
CCDC33-209ENST00000560565 PLEKHG3A1L390 1219 aa11.01□□□□□ -0.65
CCDC33-209ENST00000560565 BECN1Q14457 450 aa11.01□□□□□ -0.65
CCDC33-209ENST00000560565 L1TD1Q5T7N2 865 aaKnown RBP11.01□□□□□ -0.65
CCDC33-209ENST00000560565 NPM2Q86SE8 214 aaKnown RBP11.01□□□□□ -0.65
CCDC33-209ENST00000560565 CABLES1Q8TDN4 633 aa11.01□□□□□ -0.65
CCDC33-209ENST00000560565 USP21Q9UK80 565 aa11.01□□□□□ -0.65
CCDC33-209ENST00000560565 ACEP12821 1306 aa11.01□□□□□ -0.65
CCDC33-209ENST00000560565 NSD2O96028 1365 aa11.01□□□□□ -0.65
CCDC33-209ENST00000560565 MARF1Q9Y4F3 1742 aaKnown RBP11.01□□□□□ -0.65
CCDC33-209ENST00000560565 GLIPR1L2Q4G1C9 344 aa11□□□□□ -0.65
CCDC33-209ENST00000560565 FNBP4Q8N3X1 1017 aaPredicted RBP11□□□□□ -0.65
CCDC33-209ENST00000560565 EXOC6Q8TAG9 804 aa11□□□□□ -0.65
CCDC33-209ENST00000560565 TRPM3Q9HCF6 1732 aaPredicted RBP10.99□□□□□ -0.65
CCDC33-209ENST00000560565 RBM6P78332 1123 aaKnown RBP10.99□□□□□ -0.65
CCDC33-209ENST00000560565 FAM43AQ8N2R8 423 aa10.99□□□□□ -0.65
CCDC33-209ENST00000560565 TERF2IPQ9NYB0 399 aa10.99□□□□□ -0.65
CCDC33-209ENST00000560565 CABP1Q9NZU7 370 aa10.99□□□□□ -0.65
CCDC33-209ENST00000560565 POLR3AO14802 1390 aaPredicted RBP10.99□□□□□ -0.65
CCDC33-209ENST00000560565 PPIP5K1Q6PFW1 1433 aa10.99□□□□□ -0.65
CCDC33-209ENST00000560565 AMER1Q5JTC6 1135 aaPredicted RBP10.98□□□□□ -0.65
CCDC33-209ENST00000560565 TRPC5Q9UL62 973 aaPredicted RBP10.98□□□□□ -0.65
CCDC33-209ENST00000560565 ALS2Q96Q42 1657 aa10.98□□□□□ -0.65
CCDC33-209ENST00000560565 MAPK8IP3Q9UPT6 1336 aa10.97□□□□□ -0.65
CCDC33-209ENST00000560565 MAP2P11137 1827 aaKnown RBP10.96□□□□□ -0.65
CCDC33-209ENST00000560565 NSD3Q9BZ95 1437 aa10.96□□□□□ -0.65
CCDC33-209ENST00000560565 CGNL1Q0VF96 1302 aa10.96□□□□□ -0.65
CCDC33-209ENST00000560565 HDGFL2Q7Z4V5 671 aaPredicted RBP10.96□□□□□ -0.65
CCDC33-209ENST00000560565 CCDC125Q86Z20 511 aa10.96□□□□□ -0.65
CCDC33-209ENST00000560565 ABTB2Q8N961 1025 aa10.96□□□□□ -0.65
CCDC33-209ENST00000560565 SLC12A5Q9H2X9 1139 aa10.96□□□□□ -0.65
CCDC33-209ENST00000560565 UPF2Q9HAU5 1272 aaKnown RBP10.96□□□□□ -0.65
CCDC33-209ENST00000560565 CD163L1Q9NR16 1453 aa10.95□□□□□ -0.66
CCDC33-209ENST00000560565 WDR43Q15061 677 aaKnown RBP eCLIP10.95□□□□□ -0.66
CCDC33-209ENST00000560565 NFKBIBQ15653 356 aa10.95□□□□□ -0.66
CCDC33-209ENST00000560565 NUTM2GQ5VZR2 741 aa10.95□□□□□ -0.66
CCDC33-209ENST00000560565 UNC5CLQ8IV45 518 aa10.95□□□□□ -0.66
CCDC33-209ENST00000560565 LAS1LQ9Y4W2 734 aaKnown RBP10.95□□□□□ -0.66
CCDC33-209ENST00000560565 ABCA3Q99758 1704 aa10.95□□□□□ -0.66
CCDC33-209ENST00000560565 NRKQ7Z2Y5 1582 aa10.94□□□□□ -0.66
CCDC33-209ENST00000560565 BCL9LQ86UU0 1499 aa10.94□□□□□ -0.66
CCDC33-209ENST00000560565 A0A1W2PP64 1363 aa10.94□□□□□ -0.66
CCDC33-209ENST00000560565 FAM83GA6ND36 823 aa10.94□□□□□ -0.66
CCDC33-209ENST00000560565 UBE2Q2Q8WVN8 375 aa10.94□□□□□ -0.66
CCDC33-209ENST00000560565 ZNF692Q9BU19 519 aaPredicted RBP10.94□□□□□ -0.66
CCDC33-209ENST00000560565 CARD14Q9BXL6 1004 aa10.94□□□□□ -0.66
CCDC33-209ENST00000560565 ATRNO75882 1429 aa10.93□□□□□ -0.66
CCDC33-209ENST00000560565 CPSF1Q10570 1443 aaKnown RBP10.93□□□□□ -0.66
CCDC33-209ENST00000560565 KDM2BQ8NHM5 1336 aa10.93□□□□□ -0.66
CCDC33-209ENST00000560565 USP54Q70EL1 1684 aa10.93□□□□□ -0.66
CCDC33-209ENST00000560565 PRELPP51888 382 aa10.93□□□□□ -0.66
CCDC33-209ENST00000560565 ISY1Q9ULR0 285 aaKnown RBP10.93□□□□□ -0.66
CCDC33-209ENST00000560565 SLIT2O94813 1529 aa10.93□□□□□ -0.66
CCDC33-209ENST00000560565 EDC4Q6P2E9 1401 aaKnown RBP10.92□□□□□ -0.66
CCDC33-209ENST00000560565 PSDA5PKW4 1024 aaPredicted RBP10.92□□□□□ -0.66
CCDC33-209ENST00000560565 GJD4Q96KN9 370 aaPredicted RBP10.92□□□□□ -0.66
CCDC33-209ENST00000560565 USP6P35125 1406 aa10.92□□□□□ -0.66
CCDC33-209ENST00000560565 EIF5BO60841 1220 aaKnown RBP10.91□□□□□ -0.66
CCDC33-209ENST00000560565 NLRP6P59044 892 aa10.91□□□□□ -0.66
CCDC33-209ENST00000560565 GOLGA2Q08379 1002 aa10.91□□□□□ -0.66
CCDC33-209ENST00000560565 CC2D1BQ5T0F9 858 aaKnown RBP10.91□□□□□ -0.66
CCDC33-209ENST00000560565 PRDM11Q9NQV5 511 aa10.91□□□□□ -0.66
CCDC33-209ENST00000560565 BTG4Q9NY30 223 aa10.91□□□□□ -0.66
CCDC33-209ENST00000560565 CCDC9Q9Y3X0 531 aaKnown RBP10.91□□□□□ -0.66
CCDC33-209ENST00000560565 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.91□□□□□ -0.66
CCDC33-209ENST00000560565 NWD2Q9ULI1 1742 aa10.91□□□□□ -0.66
CCDC33-209ENST00000560565 CRYBG1Q9Y4K1 1723 aa10.9□□□□□ -0.66
CCDC33-209ENST00000560565 PLCH1Q4KWH8 1693 aa10.9□□□□□ -0.66
CCDC33-209ENST00000560565 PTMSP20962 102 aa10.9□□□□□ -0.66
CCDC33-209ENST00000560565 ZC3H6P61129 1189 aaKnown RBP10.9□□□□□ -0.66
CCDC33-209ENST00000560565 VPS72Q15906 364 aa10.9□□□□□ -0.66
CCDC33-209ENST00000560565 COL14A1Q05707 1796 aaKnown RBP10.9□□□□□ -0.67
CCDC33-209ENST00000560565 PPP2R1AP30153 589 aa10.89□□□□□ -0.67
CCDC33-209ENST00000560565 DEFB132Q7Z7B7 95 aa10.89□□□□□ -0.67
CCDC33-209ENST00000560565 CRBNQ96SW2 442 aa10.89□□□□□ -0.67
CCDC33-209ENST00000560565 KIAA0232Q92628 1395 aa10.89□□□□□ -0.67
CCDC33-209ENST00000560565 TTC21BQ7Z4L5 1316 aa10.88□□□□□ -0.67
CCDC33-209ENST00000560565 PHRF1Q9P1Y6 1649 aaKnown RBP10.88□□□□□ -0.67
CCDC33-209ENST00000560565 E9PSI1 815 aa10.88□□□□□ -0.67
CCDC33-209ENST00000560565 GCP02774 474 aa10.88□□□□□ -0.67
CCDC33-209ENST00000560565 PDE3AQ14432 1141 aa10.88□□□□□ -0.67
CCDC33-209ENST00000560565 CHRNA2Q15822 529 aa10.88□□□□□ -0.67
CCDC33-209ENST00000560565 SSH2Q76I76 1423 aa10.88□□□□□ -0.67
CCDC33-209ENST00000560565 MORC1Q86VD1 984 aa10.88□□□□□ -0.67
CCDC33-209ENST00000560565 IL27Q8NEV9 243 aa10.88□□□□□ -0.67
CCDC33-209ENST00000560565 USP19O94966 1318 aa10.87□□□□□ -0.67
CCDC33-209ENST00000560565 TTC21AQ8NDW8 1320 aa10.87□□□□□ -0.67
CCDC33-209ENST00000560565 NCBP3Q53F19 620 aaKnown RBP10.87□□□□□ -0.67
CCDC33-209ENST00000560565 ANO8Q9HCE9 1232 aaPredicted RBP10.87□□□□□ -0.67
CCDC33-209ENST00000560565 EVA1CP58658 441 aa10.86□□□□□ -0.67
CCDC33-209ENST00000560565 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.86□□□□□ -0.67
CCDC33-209ENST00000560565 GLI3P10071 1580 aa10.86□□□□□ -0.67
CCDC33-209ENST00000560565 PIK3C2AO00443 1686 aa10.85□□□□□ -0.67
CCDC33-209ENST00000560565 NRAPQ86VF7 1730 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms