RNA–Protein interactions for RNA: ENST00000559545.5

CDK12-204, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-204ENST00000559545 FOXD4L5Q5VV16 416 aaPredicted RBP7.65□□□□□ -1.18
CDK12-204ENST00000559545 FOXD4L4Q8WXT5 416 aaPredicted RBP7.65□□□□□ -1.18
CDK12-204ENST00000559545 USP47Q96K76 1375 aa7.65□□□□□ -1.18
CDK12-204ENST00000559545 USP31Q70CQ4 1352 aa7.64□□□□□ -1.19
CDK12-204ENST00000559545 TESPA1A2RU30 521 aaPredicted RBP7.64□□□□□ -1.19
CDK12-204ENST00000559545 A6NJR5 290 aa7.64□□□□□ -1.19
CDK12-204ENST00000559545 TRAK2O60296 914 aa7.64□□□□□ -1.19
CDK12-204ENST00000559545 CDCA8Q53HL2 280 aa7.64□□□□□ -1.19
CDK12-204ENST00000559545 FNBP4Q8N3X1 1017 aaPredicted RBP7.64□□□□□ -1.19
CDK12-204ENST00000559545 KRI1Q8N9T8 703 aaKnown RBP7.64□□□□□ -1.19
CDK12-204ENST00000559545 HIRIP3Q9BW71 556 aaPredicted RBP7.64□□□□□ -1.19
CDK12-204ENST00000559545 CABP1Q9NZU7 370 aa7.64□□□□□ -1.19
CDK12-204ENST00000559545 USP35Q9P2H5 1018 aa7.64□□□□□ -1.19
CDK12-204ENST00000559545 RGS17Q9UGC6 210 aaPredicted RBP7.64□□□□□ -1.19
CDK12-204ENST00000559545 ARHGEF10O15013 1369 aa7.63□□□□□ -1.19
CDK12-204ENST00000559545 TTC21AQ8NDW8 1320 aa7.63□□□□□ -1.19
CDK12-204ENST00000559545 EIF4G2P78344 907 aaKnown RBP eCLIP7.63□□□□□ -1.19
CDK12-204ENST00000559545 TMF1P82094 1093 aa7.63□□□□□ -1.19
CDK12-204ENST00000559545 SAFB2Q14151 953 aaKnown RBP eCLIP7.63□□□□□ -1.19
CDK12-204ENST00000559545 POLA2Q14181 598 aa7.63□□□□□ -1.19
CDK12-204ENST00000559545 CABP2Q9NPB3 220 aa7.63□□□□□ -1.19
CDK12-204ENST00000559545 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.63□□□□□ -1.19
CDK12-204ENST00000559545 NRKQ7Z2Y5 1582 aa7.63□□□□□ -1.19
CDK12-204ENST00000559545 USP6P35125 1406 aa7.62□□□□□ -1.19
CDK12-204ENST00000559545 TNS3Q68CZ2 1445 aa7.62□□□□□ -1.19
CDK12-204ENST00000559545 PPIP5K1Q6PFW1 1433 aa7.62□□□□□ -1.19
CDK12-204ENST00000559545 COL18A1P39060 1754 aa7.62□□□□□ -1.19
CDK12-204ENST00000559545 USP19O94966 1318 aa7.62□□□□□ -1.19
CDK12-204ENST00000559545 ABCA3Q99758 1704 aa7.62□□□□□ -1.19
CDK12-204ENST00000559545 NWD2Q9ULI1 1742 aa7.62□□□□□ -1.19
CDK12-204ENST00000559545 DDX17Q92841 729 aaKnown RBP7.62□□□□□ -1.19
CDK12-204ENST00000559545 SEMA3EO15041 775 aa7.61□□□□□ -1.19
CDK12-204ENST00000559545 ONECUT3O60422 494 aaPredicted RBP7.61□□□□□ -1.19
CDK12-204ENST00000559545 PMFBP1Q8TBY8 1022 aa7.61□□□□□ -1.19
CDK12-204ENST00000559545 FBXW7Q969H0 707 aa7.61□□□□□ -1.19
CDK12-204ENST00000559545 CCDC97Q96F63 343 aaPredicted RBP7.61□□□□□ -1.19
CDK12-204ENST00000559545 MYOM1P52179 1685 aa7.6□□□□□ -1.19
CDK12-204ENST00000559545 CPDO75976 1380 aa7.6□□□□□ -1.19
CDK12-204ENST00000559545 LRP6O75581 1613 aa7.6□□□□□ -1.19
CDK12-204ENST00000559545 PHRF1Q9P1Y6 1649 aaKnown RBP7.6□□□□□ -1.19
CDK12-204ENST00000559545 CAPN15O75808 1086 aa7.6□□□□□ -1.19
CDK12-204ENST00000559545 HSPA5P11021 654 aaKnown RBP7.6□□□□□ -1.19
CDK12-204ENST00000559545 SRPK2P78362 688 aaKnown RBP7.6□□□□□ -1.19
CDK12-204ENST00000559545 NGDNQ8NEJ9 315 aaKnown RBP7.6□□□□□ -1.19
CDK12-204ENST00000559545 ZNF428Q96B54 188 aa7.6□□□□□ -1.19
CDK12-204ENST00000559545 SLC12A5Q9H2X9 1139 aa7.6□□□□□ -1.19
CDK12-204ENST00000559545 SERPINA10Q9UK55 444 aa7.6□□□□□ -1.19
CDK12-204ENST00000559545 ZBTB12Q9Y330 459 aaPredicted RBP7.6□□□□□ -1.19
CDK12-204ENST00000559545 SLIT3O75094 1523 aa7.6□□□□□ -1.19
CDK12-204ENST00000559545 SLIT2O94813 1529 aa7.6□□□□□ -1.19
CDK12-204ENST00000559545 ANKRD36BQ8N2N9 1353 aa7.59□□□□□ -1.19
CDK12-204ENST00000559545 DISP3Q9P2K9 1392 aa7.59□□□□□ -1.19
CDK12-204ENST00000559545 TTC21BQ7Z4L5 1316 aa7.59□□□□□ -1.19
CDK12-204ENST00000559545 NUTM2FA1L443 756 aa7.59□□□□□ -1.19
CDK12-204ENST00000559545 C11orf95C9JLR9 678 aaPredicted RBP7.59□□□□□ -1.19
CDK12-204ENST00000559545 PER1O15534 1290 aaPredicted RBP7.59□□□□□ -1.19
CDK12-204ENST00000559545 NLRP13Q86W25 1043 aa7.59□□□□□ -1.19
CDK12-204ENST00000559545 SPINK5Q9NQ38 1064 aaPredicted RBP7.59□□□□□ -1.19
CDK12-204ENST00000559545 STK24Q9Y6E0 443 aa7.59□□□□□ -1.19
CDK12-204ENST00000559545 EDC4Q6P2E9 1401 aaKnown RBP7.59□□□□□ -1.19
CDK12-204ENST00000559545 MAP2P11137 1827 aaKnown RBP7.59□□□□□ -1.19
CDK12-204ENST00000559545 ABCC6O95255 1503 aa7.58□□□□□ -1.2
CDK12-204ENST00000559545 PIK3C2AO00443 1686 aa7.58□□□□□ -1.2
CDK12-204ENST00000559545 BCL9LQ86UU0 1499 aa7.58□□□□□ -1.2
CDK12-204ENST00000559545 ZNF316A6NFI3 1004 aaPredicted RBP7.58□□□□□ -1.2
CDK12-204ENST00000559545 ZEB1P37275 1124 aaPredicted RBP7.58□□□□□ -1.2
CDK12-204ENST00000559545 POLR3GLQ9BT43 218 aa7.58□□□□□ -1.2
CDK12-204ENST00000559545 CARD14Q9BXL6 1004 aa7.58□□□□□ -1.2
CDK12-204ENST00000559545 TERF2IPQ9NYB0 399 aa7.58□□□□□ -1.2
CDK12-204ENST00000559545 COL14A1Q05707 1796 aaKnown RBP7.58□□□□□ -1.2
CDK12-204ENST00000559545 LMO7Q8WWI1 1683 aa7.57□□□□□ -1.2
CDK12-204ENST00000559545 CDK12Q9NYV4 1490 aaPredicted RBP7.57□□□□□ -1.2
CDK12-204ENST00000559545 FAM83GA6ND36 823 aa7.57□□□□□ -1.2
CDK12-204ENST00000559545 PATL2C9JE40 543 aaKnown RBP7.57□□□□□ -1.2
CDK12-204ENST00000559545 GCP02774 474 aa7.57□□□□□ -1.2
CDK12-204ENST00000559545 KTN1Q86UP2 1357 aaKnown RBP7.57□□□□□ -1.2
CDK12-204ENST00000559545 NPC1L1Q9UHC9 1359 aa7.57□□□□□ -1.2
CDK12-204ENST00000559545 FYB1O15117 783 aa7.56□□□□□ -1.2
CDK12-204ENST00000559545 BRD2P25440 801 aaKnown RBP7.56□□□□□ -1.2
CDK12-204ENST00000559545 PDE4CQ08493 712 aa7.56□□□□□ -1.2
CDK12-204ENST00000559545 E2F4Q16254 413 aa7.56□□□□□ -1.2
CDK12-204ENST00000559545 ZNF772Q68DY9 489 aaPredicted RBP7.56□□□□□ -1.2
CDK12-204ENST00000559545 HDGFL2Q7Z4V5 671 aaPredicted RBP7.56□□□□□ -1.2
CDK12-204ENST00000559545 ARHGEF25Q86VW2 580 aa7.56□□□□□ -1.2
CDK12-204ENST00000559545 KCNH5Q8NCM2 988 aa7.56□□□□□ -1.2
CDK12-204ENST00000559545 A0A1W2PP64 1363 aa7.56□□□□□ -1.2
CDK12-204ENST00000559545 RGPD5Q99666 1765 aa7.56□□□□□ -1.2
CDK12-204ENST00000559545 NRAPQ86VF7 1730 aa7.55□□□□□ -1.2
CDK12-204ENST00000559545 ANKRD26Q9UPS8 1709 aa7.55□□□□□ -1.2
CDK12-204ENST00000559545 WASHC2AQ641Q2 1341 aa7.55□□□□□ -1.2
CDK12-204ENST00000559545 OVOS2A0A0J9YW53 1432 aa7.55□□□□□ -1.2
CDK12-204ENST00000559545 ATRNO75882 1429 aa7.55□□□□□ -1.2
CDK12-204ENST00000559545 OVOS2Q6IE36 1432 aa7.55□□□□□ -1.2
CDK12-204ENST00000559545 PDE4DQ08499 809 aa7.55□□□□□ -1.2
CDK12-204ENST00000559545 ABTB2Q8N961 1025 aa7.55□□□□□ -1.2
CDK12-204ENST00000559545 BCL11BQ9C0K0 894 aaPredicted RBP7.55□□□□□ -1.2
CDK12-204ENST00000559545 KIF24Q5T7B8 1368 aa7.55□□□□□ -1.2
CDK12-204ENST00000559545 AATKQ6ZMQ8 1374 aa7.55□□□□□ -1.2
CDK12-204ENST00000559545 NFAT5O94916 1531 aa7.54□□□□□ -1.2
CDK12-204ENST00000559545 XPCQ01831 940 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms