RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 RALGAPBQ86X10 1494 aa8.62□□□□□ -1.03
CTDSPL2-204ENST00000558966 LMOD2Q6P5Q4 547 aa8.62□□□□□ -1.03
CTDSPL2-204ENST00000558966 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.62□□□□□ -1.03
CTDSPL2-204ENST00000558966 KRT28Q7Z3Y7 464 aa8.62□□□□□ -1.03
CTDSPL2-204ENST00000558966 PCGF6Q9BYE7 350 aa8.62□□□□□ -1.03
CTDSPL2-204ENST00000558966 TNS3Q68CZ2 1445 aa8.62□□□□□ -1.03
CTDSPL2-204ENST00000558966 SOCS7O14512 581 aa8.61□□□□□ -1.03
CTDSPL2-204ENST00000558966 PDE4AP27815 886 aa8.61□□□□□ -1.03
CTDSPL2-204ENST00000558966 TIE1P35590 1138 aa8.61□□□□□ -1.03
CTDSPL2-204ENST00000558966 CDK19Q9BWU1 502 aa8.61□□□□□ -1.03
CTDSPL2-204ENST00000558966 BMP2KQ9NSY1 1161 aaPredicted RBP8.61□□□□□ -1.03
CTDSPL2-204ENST00000558966 SBNO1A3KN83 1393 aa8.61□□□□□ -1.03
CTDSPL2-204ENST00000558966 ABCA3Q99758 1704 aa8.6□□□□□ -1.03
CTDSPL2-204ENST00000558966 MARF1Q9Y4F3 1742 aaKnown RBP8.6□□□□□ -1.03
CTDSPL2-204ENST00000558966 ALS2Q96Q42 1657 aa8.6□□□□□ -1.03
CTDSPL2-204ENST00000558966 GALR2O43603 387 aaPredicted RBP8.6□□□□□ -1.03
CTDSPL2-204ENST00000558966 NUDT16Q96DE0 195 aaKnown RBP8.6□□□□□ -1.03
CTDSPL2-204ENST00000558966 AFF2P51816 1311 aa8.6□□□□□ -1.03
CTDSPL2-204ENST00000558966 ADAMTS2O95450 1211 aa8.6□□□□□ -1.03
CTDSPL2-204ENST00000558966 C8orf37Q96NL8 207 aa8.6□□□□□ -1.03
CTDSPL2-204ENST00000558966 CRISPLD2Q9H0B8 497 aa8.6□□□□□ -1.03
CTDSPL2-204ENST00000558966 PSME1Q06323 249 aa8.59□□□□□ -1.03
CTDSPL2-204ENST00000558966 ZNF772Q68DY9 489 aaPredicted RBP8.59□□□□□ -1.03
CTDSPL2-204ENST00000558966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.59□□□□□ -1.037e-7■■■□□ 19
CTDSPL2-204ENST00000558966 SEMA3EO15041 775 aa8.58□□□□□ -1.04
CTDSPL2-204ENST00000558966 POLR3AO14802 1390 aaPredicted RBP8.58□□□□□ -1.04
CTDSPL2-204ENST00000558966 ARHGEF10O15013 1369 aa8.58□□□□□ -1.04
CTDSPL2-204ENST00000558966 MFSD10Q14728 455 aa8.57□□□□□ -1.04
CTDSPL2-204ENST00000558966 DDX27Q96GQ7 796 aaKnown RBP8.57□□□□□ -1.04
CTDSPL2-204ENST00000558966 TRIM35Q9UPQ4 493 aa8.57□□□□□ -1.04
CTDSPL2-204ENST00000558966 CRYBG1Q9Y4K1 1723 aa8.57□□□□□ -1.04
CTDSPL2-204ENST00000558966 SRPK2P78362 688 aaKnown RBP8.57□□□□□ -1.04
CTDSPL2-204ENST00000558966 NGDNQ8NEJ9 315 aaKnown RBP8.57□□□□□ -1.04
CTDSPL2-204ENST00000558966 CARD11Q9BXL7 1154 aa8.57□□□□□ -1.04
CTDSPL2-204ENST00000558966 PPIP5K1Q6PFW1 1433 aa8.57□□□□□ -1.04
CTDSPL2-204ENST00000558966 SBNO2Q9Y2G9 1366 aa8.56□□□□□ -1.04
CTDSPL2-204ENST00000558966 PLEKHG3A1L390 1219 aa8.56□□□□□ -1.04
CTDSPL2-204ENST00000558966 HAX1O00165 279 aa8.56□□□□□ -1.04
CTDSPL2-204ENST00000558966 EVX2Q03828 476 aa8.56□□□□□ -1.04
CTDSPL2-204ENST00000558966 CABLES1Q8TDN4 633 aa8.56□□□□□ -1.04
CTDSPL2-204ENST00000558966 NGLY1Q96IV0 654 aa8.56□□□□□ -1.04
CTDSPL2-204ENST00000558966 ACEP12821 1306 aa8.56□□□□□ -1.04
CTDSPL2-204ENST00000558966 CLSPNQ9HAW4 1339 aa8.56□□□□□ -1.04
CTDSPL2-204ENST00000558966 DPY19L2Q6NUT2 758 aa8.55□□□□□ -1.04
CTDSPL2-204ENST00000558966 FNBP4Q8N3X1 1017 aaPredicted RBP8.55□□□□□ -1.04
CTDSPL2-204ENST00000558966 BCL9LQ86UU0 1499 aa8.55□□□□□ -1.04
CTDSPL2-204ENST00000558966 EVC2Q86UK5 1308 aa8.55□□□□□ -1.04
CTDSPL2-204ENST00000558966 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.55□□□□□ -1.04
CTDSPL2-204ENST00000558966 PLCH1Q4KWH8 1693 aa8.55□□□□□ -1.04
CTDSPL2-204ENST00000558966 SLIT2O94813 1529 aa8.54□□□□□ -1.04
CTDSPL2-204ENST00000558966 ATRNO75882 1429 aa8.54□□□□□ -1.04
CTDSPL2-204ENST00000558966 TULP1O00294 542 aaPredicted RBP8.54□□□□□ -1.04
CTDSPL2-204ENST00000558966 USP21Q9UK80 565 aa8.54□□□□□ -1.04
CTDSPL2-204ENST00000558966 CDK12Q9NYV4 1490 aaPredicted RBP8.54□□□□□ -1.04
CTDSPL2-204ENST00000558966 PHRF1Q9P1Y6 1649 aaKnown RBP8.54□□□□□ -1.04
CTDSPL2-204ENST00000558966 TESPA1A2RU30 521 aaPredicted RBP8.53□□□□□ -1.04
CTDSPL2-204ENST00000558966 RXRBP28702 533 aa8.53□□□□□ -1.04
CTDSPL2-204ENST00000558966 QTRT2Q9H974 415 aaKnown RBP8.53□□□□□ -1.04
CTDSPL2-204ENST00000558966 RGS12O14924 1447 aa8.53□□□□□ -1.04
CTDSPL2-204ENST00000558966 CABP1Q9NZU7 370 aa8.53□□□□□ -1.04
CTDSPL2-204ENST00000558966 NWD2Q9ULI1 1742 aa8.52□□□□□ -1.04
CTDSPL2-204ENST00000558966 USP6P35125 1406 aa8.52□□□□□ -1.04
CTDSPL2-204ENST00000558966 AKAP12Q02952 1782 aa8.52□□□□□ -1.04
CTDSPL2-204ENST00000558966 TIMELESSQ9UNS1 1208 aa8.52□□□□□ -1.05
CTDSPL2-204ENST00000558966 ATAD2Q6PL18 1390 aa8.52□□□□□ -1.05
CTDSPL2-204ENST00000558966 SSH2Q76I76 1423 aa8.52□□□□□ -1.05
CTDSPL2-204ENST00000558966 NRKQ7Z2Y5 1582 aa8.52□□□□□ -1.05
CTDSPL2-204ENST00000558966 NRAPQ86VF7 1730 aa8.51□□□□□ -1.05
CTDSPL2-204ENST00000558966 RBM6P78332 1123 aaKnown RBP8.51□□□□□ -1.05
CTDSPL2-204ENST00000558966 TESK2Q96S53 571 aa8.51□□□□□ -1.05
CTDSPL2-204ENST00000558966 TRPC5Q9UL62 973 aaPredicted RBP8.51□□□□□ -1.05
CTDSPL2-204ENST00000558966 GLI3P10071 1580 aa8.51□□□□□ -1.05
CTDSPL2-204ENST00000558966 COL14A1Q05707 1796 aaKnown RBP8.51□□□□□ -1.05
CTDSPL2-204ENST00000558966 ST20-MTHFSA0A0A6YYL1 179 aa8.51□□□□□ -1.05
CTDSPL2-204ENST00000558966 NUTM2GQ5VZR2 741 aa8.51□□□□□ -1.05
CTDSPL2-204ENST00000558966 CCER1Q8TC90 406 aaPredicted RBP8.51□□□□□ -1.05
CTDSPL2-204ENST00000558966 USP19O94966 1318 aa8.51□□□□□ -1.05
CTDSPL2-204ENST00000558966 BRD4O60885 1362 aaPredicted RBP8.51□□□□□ -1.05
CTDSPL2-204ENST00000558966 CPSF1Q10570 1443 aaKnown RBP8.51□□□□□ -1.05
CTDSPL2-204ENST00000558966 PIK3C2AO00443 1686 aa8.5□□□□□ -1.05
CTDSPL2-204ENST00000558966 MON2Q7Z3U7 1717 aa8.5□□□□□ -1.05
CTDSPL2-204ENST00000558966 FAM83GA6ND36 823 aa8.5□□□□□ -1.05
CTDSPL2-204ENST00000558966 ATN1P54259 1190 aaPredicted RBP8.5□□□□□ -1.05
CTDSPL2-204ENST00000558966 CAMK2BQ13554 666 aa8.5□□□□□ -1.05
CTDSPL2-204ENST00000558966 UNC5CLQ8IV45 518 aa8.5□□□□□ -1.05
CTDSPL2-204ENST00000558966 USP47Q96K76 1375 aa8.5□□□□□ -1.05
CTDSPL2-204ENST00000558966 CD163L1Q9NR16 1453 aa8.5□□□□□ -1.05
CTDSPL2-204ENST00000558966 EP400Q96L91 3159 aa8.5□□□□□ -1.05
CTDSPL2-204ENST00000558966 PPP1R15BQ5SWA1 713 aa8.49□□□□□ -1.05
CTDSPL2-204ENST00000558966 KIAA0232Q92628 1395 aa8.49□□□□□ -1.05
CTDSPL2-204ENST00000558966 ABTB2Q8N961 1025 aa8.49□□□□□ -1.05
CTDSPL2-204ENST00000558966 ZC3H15Q8WU90 426 aaKnown RBP8.49□□□□□ -1.05
CTDSPL2-204ENST00000558966 GPHNQ9NQX3 736 aaPredicted RBP8.49□□□□□ -1.05
CTDSPL2-204ENST00000558966 SLIT3O75094 1523 aa8.48□□□□□ -1.05
CTDSPL2-204ENST00000558966 MICALL2Q8IY33 904 aa8.48□□□□□ -1.05
CTDSPL2-204ENST00000558966 PDCD7Q8N8D1 485 aaKnown RBP8.48□□□□□ -1.05
CTDSPL2-204ENST00000558966 GJD4Q96KN9 370 aaPredicted RBP8.48□□□□□ -1.05
CTDSPL2-204ENST00000558966 LMO7Q8WWI1 1683 aa8.47□□□□□ -1.05
CTDSPL2-204ENST00000558966 ZC3H6P61129 1189 aaKnown RBP8.47□□□□□ -1.05
CTDSPL2-204ENST00000558966 VPS72Q15906 364 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms