RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 ABCC1P33527 1531 aa18.93■□□□□ 0.62
AP4E1-202ENST00000558439 SURF6O75683 361 aaKnown RBP18.93■□□□□ 0.62
AP4E1-202ENST00000558439 GOLGA6L4A6NEF3 574 aa18.93■□□□□ 0.62
AP4E1-202ENST00000558439 UBTFL1P0CB47 393 aaPredicted RBP18.93■□□□□ 0.62
AP4E1-202ENST00000558439 NUCB2P80303 420 aa18.93■□□□□ 0.62
AP4E1-202ENST00000558439 ARID3AQ99856 593 aa18.93■□□□□ 0.62
AP4E1-202ENST00000558439 C9orf78Q9NZ63 289 aaPredicted RBP18.93■□□□□ 0.62
AP4E1-202ENST00000558439 RABEP1Q15276 862 aa18.92■□□□□ 0.62
AP4E1-202ENST00000558439 C16orf71Q8IYS4 520 aaPredicted RBP18.92■□□□□ 0.62
AP4E1-202ENST00000558439 GNAI2P04899 355 aa18.92■□□□□ 0.62
AP4E1-202ENST00000558439 PSME1Q06323 249 aa18.92■□□□□ 0.62
AP4E1-202ENST00000558439 ZNF330Q9Y3S2 320 aaPredicted RBP18.92■□□□□ 0.62
AP4E1-202ENST00000558439 SMC5Q8IY18 1101 aa18.92■□□□□ 0.62
AP4E1-202ENST00000558439 IL1RAPL2Q9NP60 686 aa18.92■□□□□ 0.62
AP4E1-202ENST00000558439 PRPF40AO75400 957 aaKnown RBP18.91■□□□□ 0.62
AP4E1-202ENST00000558439 MAP4K4O95819 1239 aaPredicted RBP18.91■□□□□ 0.62
AP4E1-202ENST00000558439 BMP2KLQ5H9B9 411 aa18.91■□□□□ 0.62
AP4E1-202ENST00000558439 MRPL50Q8N5N7 158 aaKnown RBP18.91■□□□□ 0.62
AP4E1-202ENST00000558439 GAS2L2Q8NHY3 880 aa18.91■□□□□ 0.62
AP4E1-202ENST00000558439 RBM33Q96EV2 1170 aaKnown RBP18.91■□□□□ 0.62
AP4E1-202ENST00000558439 TRPM2O94759 1503 aa18.91■□□□□ 0.62
AP4E1-202ENST00000558439 PUS7Q96PZ0 661 aaKnown RBP18.91■□□□□ 0.62
AP4E1-202ENST00000558439 RSPH6AQ9H0K4 717 aa18.91■□□□□ 0.62
AP4E1-202ENST00000558439 CCDC30Q5VVM6 783 aa18.9■□□□□ 0.62
AP4E1-202ENST00000558439 TNPO1Q92973 898 aaKnown RBP18.9■□□□□ 0.62
AP4E1-202ENST00000558439 TSHZ3Q63HK5 1081 aa18.9■□□□□ 0.62
AP4E1-202ENST00000558439 CHMP3Q9Y3E7 222 aa18.9■□□□□ 0.62
AP4E1-202ENST00000558439 RPAP2Q8IXW5 612 aaPredicted RBP18.9■□□□□ 0.62
AP4E1-202ENST00000558439 CHD1O14646 1710 aa18.9■□□□□ 0.62
AP4E1-202ENST00000558439 HDGFL1Q5TGJ6 251 aa18.89■□□□□ 0.61
AP4E1-202ENST00000558439 GRPEL1Q9HAV7 217 aa18.89■□□□□ 0.61
AP4E1-202ENST00000558439 GNAI3P08754 354 aa18.89■□□□□ 0.61
AP4E1-202ENST00000558439 AIMP1Q12904 312 aaKnown RBP18.89■□□□□ 0.61
AP4E1-202ENST00000558439 SSFA2P28290 1259 aa18.89■□□□□ 0.61
AP4E1-202ENST00000558439 RNF214Q8ND24 703 aa18.89■□□□□ 0.61
AP4E1-202ENST00000558439 C1orf141Q5JVX7 400 aa18.88■□□□□ 0.61
AP4E1-202ENST00000558439 IQGAP3Q86VI3 1631 aa18.88■□□□□ 0.61
AP4E1-202ENST00000558439 DIAPH3Q9NSV4 1193 aa18.88■□□□□ 0.61
AP4E1-202ENST00000558439 KDM5AP29375 1690 aaKnown RBP18.88■□□□□ 0.61
AP4E1-202ENST00000558439 NASPP49321 788 aaPredicted RBP18.87■□□□□ 0.61
AP4E1-202ENST00000558439 USHBP1Q8N6Y0 703 aa18.87■□□□□ 0.61
AP4E1-202ENST00000558439 MEIS3Q99687 375 aa18.87■□□□□ 0.61
AP4E1-202ENST00000558439 YTHDC2Q9H6S0 1430 aaKnown RBP18.87■□□□□ 0.61
AP4E1-202ENST00000558439 ERC2O15083 957 aa18.87■□□□□ 0.61
AP4E1-202ENST00000558439 FAM43AQ8N2R8 423 aa18.87■□□□□ 0.61
AP4E1-202ENST00000558439 ACEP12821 1306 aa18.87■□□□□ 0.61
AP4E1-202ENST00000558439 SYNMO15061 1565 aa18.86■□□□□ 0.61
AP4E1-202ENST00000558439 SBNO2Q9Y2G9 1366 aa18.86■□□□□ 0.61
AP4E1-202ENST00000558439 SYAP1Q96A49 352 aaPredicted RBP18.86■□□□□ 0.61
AP4E1-202ENST00000558439 PANK2Q9BZ23 570 aa18.86■□□□□ 0.61
AP4E1-202ENST00000558439 ZBTB7BO15156 539 aaPredicted RBP18.85■□□□□ 0.61
AP4E1-202ENST00000558439 CCT4P50991 539 aaKnown RBP18.85■□□□□ 0.61
AP4E1-202ENST00000558439 GPATCH3Q96I76 525 aa18.85■□□□□ 0.61
AP4E1-202ENST00000558439 LRRCC1Q9C099 1032 aa18.85■□□□□ 0.61
AP4E1-202ENST00000558439 ZCCHC11Q5TAX3 1644 aaKnown RBP18.85■□□□□ 0.61
AP4E1-202ENST00000558439 FOXO3O43524 673 aa18.84■□□□□ 0.61
AP4E1-202ENST00000558439 EIF4A2Q14240 407 aaKnown RBP18.84■□□□□ 0.61
AP4E1-202ENST00000558439 UNC13BO14795 1591 aa18.84■□□□□ 0.61
AP4E1-202ENST00000558439 PPIP5K1Q6PFW1 1433 aa18.83■□□□□ 0.61
AP4E1-202ENST00000558439 CHMP4AQ9BY43 222 aa18.83■□□□□ 0.61
AP4E1-202ENST00000558439 CLTCL1P53675 1640 aa18.83■□□□□ 0.61
AP4E1-202ENST00000558439 IFIT2P09913 472 aaKnown RBP18.83■□□□□ 0.6
AP4E1-202ENST00000558439 UPF3BQ9BZI7 483 aaKnown RBP18.83■□□□□ 0.6
AP4E1-202ENST00000558439 CIZ1Q9ULV3 898 aaPredicted RBP18.83■□□□□ 0.6
AP4E1-202ENST00000558439 ARHGAP45Q92619 1136 aa18.83■□□□□ 0.6
AP4E1-202ENST00000558439 PLEKHF1Q96S99 279 aa18.83■□□□□ 0.6
AP4E1-202ENST00000558439 XPCQ01831 940 aaPredicted RBP18.82■□□□□ 0.6
AP4E1-202ENST00000558439 ESCO1Q5FWF5 840 aa18.82■□□□□ 0.6
AP4E1-202ENST00000558439 AMOTL2Q9Y2J4 779 aa18.82■□□□□ 0.6
AP4E1-202ENST00000558439 PLXNC1O60486 1568 aa18.82■□□□□ 0.6
AP4E1-202ENST00000558439 NUTM1Q86Y26 1132 aa18.82■□□□□ 0.6
AP4E1-202ENST00000558439 ZFYVE16Q7Z3T8 1539 aa18.82■□□□□ 0.6
AP4E1-202ENST00000558439 POLR1AO95602 1720 aaPredicted RBP18.81■□□□□ 0.6
AP4E1-202ENST00000558439 XRCC6P12956 609 aaKnown RBP eCLIP18.81■□□□□ 0.6
AP4E1-202ENST00000558439 UHRF1BP1LA0JNW5 1464 aa18.8■□□□□ 0.6
AP4E1-202ENST00000558439 OTUD7AQ8TE49 926 aaPredicted RBP18.8■□□□□ 0.6
AP4E1-202ENST00000558439 IL13P35225 146 aa18.8■□□□□ 0.6
AP4E1-202ENST00000558439 TTC21BQ7Z4L5 1316 aa18.8■□□□□ 0.6
AP4E1-202ENST00000558439 SRGAP3O43295 1099 aa18.79■□□□□ 0.6
AP4E1-202ENST00000558439 MPNDQ8N594 471 aa18.79■□□□□ 0.6
AP4E1-202ENST00000558439 SDSP20132 328 aa18.79■□□□□ 0.6
AP4E1-202ENST00000558439 DRC7Q8IY82 874 aa18.79■□□□□ 0.6
AP4E1-202ENST00000558439 POGZQ7Z3K3 1410 aa18.79■□□□□ 0.6
AP4E1-202ENST00000558439 RIMS2Q9UQ26 1411 aa18.79■□□□□ 0.6
AP4E1-202ENST00000558439 VPS37CA5D8V6 355 aaPredicted RBP18.78■□□□□ 0.6
AP4E1-202ENST00000558439 GNAT3A8MTJ3 354 aa18.78■□□□□ 0.6
AP4E1-202ENST00000558439 TTC22Q5TAA0 569 aa18.78■□□□□ 0.6
AP4E1-202ENST00000558439 SRCIN1Q9C0H9 1055 aa18.78■□□□□ 0.6
AP4E1-202ENST00000558439 HSP90B1P14625 803 aaKnown RBP18.78■□□□□ 0.6
AP4E1-202ENST00000558439 ZRSR1Q15695 479 aaKnown RBP18.78■□□□□ 0.6
AP4E1-202ENST00000558439 HDAC5Q9UQL6 1122 aa18.78■□□□□ 0.6
AP4E1-202ENST00000558439 LRRFIP2Q9Y608 721 aaKnown RBP18.78■□□□□ 0.6
AP4E1-202ENST00000558439 MYOM2P54296 1465 aa18.77■□□□□ 0.6
AP4E1-202ENST00000558439 YEATS2Q9ULM3 1422 aa18.77■□□□□ 0.59
AP4E1-202ENST00000558439 USP19O94966 1318 aa18.76■□□□□ 0.59
AP4E1-202ENST00000558439 KIAA2012Q0VF49 1180 aa18.76■□□□□ 0.59
AP4E1-202ENST00000558439 FLIIQ13045 1269 aa18.76■□□□□ 0.59
AP4E1-202ENST00000558439 G3BP1Q13283 466 aaKnown RBP eCLIP18.76■□□□□ 0.59
AP4E1-202ENST00000558439 ZNF530Q6P9A1 599 aaPredicted RBP18.76■□□□□ 0.59
AP4E1-202ENST00000558439 CLASRPQ8N2M8 674 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms