RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 GGNBP2Q9H3C7 697 aa16.78■□□□□ 0.28
CPNE6-204ENST00000557829 PDZRN3Q9UPQ7 1066 aa16.78■□□□□ 0.28
CPNE6-204ENST00000557829 RGPD8O14715 1765 aaPredicted RBP16.78■□□□□ 0.28
CPNE6-204ENST00000557829 RLBP1P12271 317 aa16.78■□□□□ 0.28
CPNE6-204ENST00000557829 MVPQ14764 893 aaKnown RBP16.78■□□□□ 0.28
CPNE6-204ENST00000557829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.78■□□□□ 0.28
CPNE6-204ENST00000557829 ACEP12821 1306 aa16.78■□□□□ 0.28
CPNE6-204ENST00000557829 ZKSCAN2Q63HK3 967 aa16.77■□□□□ 0.28
CPNE6-204ENST00000557829 C14orf37Q86TY3 774 aa16.77■□□□□ 0.28
CPNE6-204ENST00000557829 TBC1D32Q96NH3 1257 aa16.77■□□□□ 0.28
CPNE6-204ENST00000557829 FMN2Q9NZ56 1722 aa16.76■□□□□ 0.27
CPNE6-204ENST00000557829 ANKARQ7Z5J8 1434 aa16.76■□□□□ 0.27
CPNE6-204ENST00000557829 IL16Q14005 1332 aa16.75■□□□□ 0.27
CPNE6-204ENST00000557829 EDC4Q6P2E9 1401 aaKnown RBP16.75■□□□□ 0.27
CPNE6-204ENST00000557829 ANO8Q9HCE9 1232 aaPredicted RBP16.75■□□□□ 0.27
CPNE6-204ENST00000557829 U2AF1L5P0DN76 240 aaPredicted RBP16.74■□□□□ 0.27
CPNE6-204ENST00000557829 U2AF1Q01081 240 aaKnown RBP eCLIP16.74■□□□□ 0.27
CPNE6-204ENST00000557829 TMEM94Q12767 1356 aa16.74■□□□□ 0.27
CPNE6-204ENST00000557829 NRKQ7Z2Y5 1582 aa16.74■□□□□ 0.27
CPNE6-204ENST00000557829 DZIP1LQ8IYY4 767 aaKnown RBP16.74■□□□□ 0.27
CPNE6-204ENST00000557829 ZNF692Q9BU19 519 aaPredicted RBP16.74■□□□□ 0.27
CPNE6-204ENST00000557829 COL3A1P02461 1466 aaPredicted RBP16.73■□□□□ 0.27
CPNE6-204ENST00000557829 HDAC1Q13547 482 aaPredicted RBP16.73■□□□□ 0.27
CPNE6-204ENST00000557829 NME9Q86XW9 330 aa16.73■□□□□ 0.27
CPNE6-204ENST00000557829 ANTXR1Q9H6X2 564 aa16.73■□□□□ 0.27
CPNE6-204ENST00000557829 PLEKHF1Q96S99 279 aa16.72■□□□□ 0.27
CPNE6-204ENST00000557829 ZRANB1Q9UGI0 708 aa16.72■□□□□ 0.27
CPNE6-204ENST00000557829 BRPF3Q9ULD4 1205 aa16.72■□□□□ 0.27
CPNE6-204ENST00000557829 MAP2P11137 1827 aaKnown RBP16.72■□□□□ 0.27
CPNE6-204ENST00000557829 USP6P35125 1406 aa16.72■□□□□ 0.27
CPNE6-204ENST00000557829 TNNQ9UQP3 1299 aa16.71■□□□□ 0.27
CPNE6-204ENST00000557829 NGDNQ8NEJ9 315 aaKnown RBP16.71■□□□□ 0.27
CPNE6-204ENST00000557829 PNNQ9H307 717 aaKnown RBP16.71■□□□□ 0.27
CPNE6-204ENST00000557829 TTC21BQ7Z4L5 1316 aa16.7■□□□□ 0.26
CPNE6-204ENST00000557829 FTSJ3Q8IY81 847 aaKnown RBP16.7■□□□□ 0.26
CPNE6-204ENST00000557829 C19orf44Q9H6X5 657 aa16.7■□□□□ 0.26
CPNE6-204ENST00000557829 DDX19BQ9UMR2 479 aa16.7■□□□□ 0.26
CPNE6-204ENST00000557829 SSH2Q76I76 1423 aa16.69■□□□□ 0.26
CPNE6-204ENST00000557829 TMPOP42166 694 aaKnown RBP16.69■□□□□ 0.26
CPNE6-204ENST00000557829 BCL2L13Q9BXK5 485 aa16.69■□□□□ 0.26
CPNE6-204ENST00000557829 TBC1D2Q9BYX2 928 aa16.68■□□□□ 0.26
CPNE6-204ENST00000557829 PHF8Q9UPP1 1060 aa16.68■□□□□ 0.26
CPNE6-204ENST00000557829 FBLN1P23142 703 aa16.67■□□□□ 0.26
CPNE6-204ENST00000557829 ESCO1Q5FWF5 840 aa16.67■□□□□ 0.26
CPNE6-204ENST00000557829 ORAI2Q96SN7 254 aa16.67■□□□□ 0.26
CPNE6-204ENST00000557829 TRIM35Q9UPQ4 493 aa16.67■□□□□ 0.26
CPNE6-204ENST00000557829 EXOSC9Q06265 439 aaKnown RBP16.67■□□□□ 0.26
CPNE6-204ENST00000557829 ATF7IPQ6VMQ6 1270 aa16.67■□□□□ 0.26
CPNE6-204ENST00000557829 RTN4Q9NQC3 1192 aaKnown RBP16.67■□□□□ 0.26
CPNE6-204ENST00000557829 ILDR1Q86SU0 546 aaPredicted RBP16.66■□□□□ 0.26
CPNE6-204ENST00000557829 SMC5Q8IY18 1101 aa16.66■□□□□ 0.26
CPNE6-204ENST00000557829 SMC4Q9NTJ3 1288 aa16.66■□□□□ 0.26
CPNE6-204ENST00000557829 NCOA3Q9Y6Q9 1424 aa16.66■□□□□ 0.26
CPNE6-204ENST00000557829 PNPLA6Q8IY17 1366 aa16.66■□□□□ 0.26
CPNE6-204ENST00000557829 L1TD1Q5T7N2 865 aaKnown RBP16.65■□□□□ 0.26
CPNE6-204ENST00000557829 UBAP1LF5GYI3 381 aa16.65■□□□□ 0.26
CPNE6-204ENST00000557829 IPO8O15397 1037 aaKnown RBP16.65■□□□□ 0.26
CPNE6-204ENST00000557829 TRIM27P14373 513 aa16.65■□□□□ 0.26
CPNE6-204ENST00000557829 ALDH1L2Q3SY69 923 aa16.64■□□□□ 0.25
CPNE6-204ENST00000557829 FAM43AQ8N2R8 423 aa16.64■□□□□ 0.25
CPNE6-204ENST00000557829 ZNF428Q96B54 188 aa16.64■□□□□ 0.25
CPNE6-204ENST00000557829 C1orf167Q5SNV9 1468 aa16.64■□□□□ 0.25
CPNE6-204ENST00000557829 KIF16BQ96L93 1317 aa16.64■□□□□ 0.25
CPNE6-204ENST00000557829 ATF3P18847 181 aa16.64■□□□□ 0.25
CPNE6-204ENST00000557829 BRPF1P55201 1214 aaPredicted RBP16.64■□□□□ 0.25
CPNE6-204ENST00000557829 SSH1Q8WYL5 1049 aa16.64■□□□□ 0.25
CPNE6-204ENST00000557829 COG3Q96JB2 828 aa16.64■□□□□ 0.25
CPNE6-204ENST00000557829 SLKQ9H2G2 1235 aaPredicted RBP16.64■□□□□ 0.25
CPNE6-204ENST00000557829 FBXO41Q8TF61 875 aa16.63■□□□□ 0.25
CPNE6-204ENST00000557829 UBE2Q2Q8WVN8 375 aa16.63■□□□□ 0.25
CPNE6-204ENST00000557829 TSR2Q969E8 191 aaKnown RBP16.63■□□□□ 0.25
CPNE6-204ENST00000557829 C22orf23Q9BZE7 217 aa16.63■□□□□ 0.25
CPNE6-204ENST00000557829 MST1RQ04912 1400 aa16.63■□□□□ 0.25
CPNE6-204ENST00000557829 DCCP43146 1447 aa16.62■□□□□ 0.25
CPNE6-204ENST00000557829 U2SURPO15042 1029 aaKnown RBP16.62■□□□□ 0.25
CPNE6-204ENST00000557829 TTC21AQ8NDW8 1320 aa16.62■□□□□ 0.25
CPNE6-204ENST00000557829 OVOS2A0A0J9YW53 1432 aa16.62■□□□□ 0.25
CPNE6-204ENST00000557829 OVOS2Q6IE36 1432 aa16.62■□□□□ 0.25
CPNE6-204ENST00000557829 PIP4K2BP78356 416 aa16.61■□□□□ 0.25
CPNE6-204ENST00000557829 ZBTB40Q9NUA8 1239 aa16.61■□□□□ 0.25
CPNE6-204ENST00000557829 MSH6P52701 1360 aa16.61■□□□□ 0.25
CPNE6-204ENST00000557829 DIAPH1O60610 1272 aaKnown RBP16.61■□□□□ 0.25
CPNE6-204ENST00000557829 RSPH6AQ9H0K4 717 aa16.61■□□□□ 0.25
CPNE6-204ENST00000557829 POLKQ9UBT6 870 aa16.61■□□□□ 0.25
CPNE6-204ENST00000557829 NOB1Q9ULX3 412 aaKnown RBP16.61■□□□□ 0.25
CPNE6-204ENST00000557829 FOXO3O43524 673 aa16.6■□□□□ 0.25
CPNE6-204ENST00000557829 ITPRIPQ8IWB1 547 aa16.6■□□□□ 0.25
CPNE6-204ENST00000557829 CHMP4BQ9H444 224 aaKnown RBP16.6■□□□□ 0.25
CPNE6-204ENST00000557829 CHMP5Q9NZZ3 219 aa16.6■□□□□ 0.25
CPNE6-204ENST00000557829 FCHSD2O94868 740 aa16.6■□□□□ 0.25
CPNE6-204ENST00000557829 RIPK4P57078 832 aa16.6■□□□□ 0.25
CPNE6-204ENST00000557829 XPCQ01831 940 aaPredicted RBP16.6■□□□□ 0.25
CPNE6-204ENST00000557829 CADPS2Q86UW7 1296 aa16.6■□□□□ 0.25
CPNE6-204ENST00000557829 EMILIN1Q9Y6C2 1016 aa16.59■□□□□ 0.25
CPNE6-204ENST00000557829 PIK3C2AO00443 1686 aa16.59■□□□□ 0.25
CPNE6-204ENST00000557829 PSME1Q06323 249 aa16.58■□□□□ 0.25
CPNE6-204ENST00000557829 NUTM2GQ5VZR2 741 aa16.58■□□□□ 0.25
CPNE6-204ENST00000557829 AATKQ6ZMQ8 1374 aa16.58■□□□□ 0.24
CPNE6-204ENST00000557829 RRS1Q15050 365 aaKnown RBP16.58■□□□□ 0.24
CPNE6-204ENST00000557829 TMEM57Q8N5G2 664 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms