RNA–Protein interactions for RNA: ENST00000557667.5

RBM23-233, Transcript of RNA binding motif protein 23, human

TSL 1 (best)

Gene RBM23, Length 4,240 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-233	ENST00000557667	KIAA0232	Q92628	1395 aa		10.83	□□□□□ -0.68
RBM23-233	ENST00000557667	KCNA6	P17658	529 aa		10.83	□□□□□ -0.68
RBM23-233	ENST00000557667	CHD2	O14647	1828 aa	Known RBP	10.83	□□□□□ -0.68
RBM23-233	ENST00000557667	NGDN	Q8NEJ9	315 aa	Known RBP	10.83	□□□□□ -0.68
RBM23-233	ENST00000557667	ROBO2	Q9HCK4	1378 aa		10.82	□□□□□ -0.68
RBM23-233	ENST00000557667	OVOS2	A0A0G2JMS6	1433 aa		10.82	□□□□□ -0.68
RBM23-233	ENST00000557667	FTSJ3	Q8IY81	847 aa	Known RBP	10.82	□□□□□ -0.68
RBM23-233	ENST00000557667	UPF2	Q9HAU5	1272 aa	Known RBP	10.82	□□□□□ -0.68
RBM23-233	ENST00000557667	SSH2	Q76I76	1423 aa		10.81	□□□□□ -0.68
RBM23-233	ENST00000557667	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.81	□□□□□ -0.68
RBM23-233	ENST00000557667	PLEKHF1	Q96S99	279 aa		10.81	□□□□□ -0.68
RBM23-233	ENST00000557667	GGNBP2	Q9H3C7	697 aa		10.81	□□□□□ -0.68
RBM23-233	ENST00000557667	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.81	□□□□□ -0.68
RBM23-233	ENST00000557667	NCAPD2	Q15021	1401 aa		10.81	□□□□□ -0.68
RBM23-233	ENST00000557667	RIPK4	P57078	832 aa		10.8	□□□□□ -0.68
RBM23-233	ENST00000557667	RTF1	Q92541	710 aa	Known RBP	10.8	□□□□□ -0.68
RBM23-233	ENST00000557667	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.8	□□□□□ -0.68
RBM23-233	ENST00000557667	ACE	P12821	1306 aa		10.8	□□□□□ -0.68
RBM23-233	ENST00000557667	POLK	Q9UBT6	870 aa		10.79	□□□□□ -0.68
RBM23-233	ENST00000557667	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.79	□□□□□ -0.68
RBM23-233	ENST00000557667	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
RBM23-233	ENST00000557667	RSPH6A	Q9H0K4	717 aa		10.79	□□□□□ -0.68
RBM23-233	ENST00000557667	IL13	P35225	146 aa		10.79	□□□□□ -0.68
RBM23-233	ENST00000557667	CLUAP1	Q96AJ1	413 aa		10.79	□□□□□ -0.68
RBM23-233	ENST00000557667	RARS	P54136	660 aa	Known RBP	10.78	□□□□□ -0.68
RBM23-233	ENST00000557667	DZIP1L	Q8IYY4	767 aa	Known RBP	10.78	□□□□□ -0.68
RBM23-233	ENST00000557667	PTPRC	P08575	1304 aa		10.78	□□□□□ -0.68
RBM23-233	ENST00000557667	WAPL	Q7Z5K2	1190 aa		10.78	□□□□□ -0.68
RBM23-233	ENST00000557667	VSIG10	Q8N0Z9	540 aa		10.77	□□□□□ -0.68
RBM23-233	ENST00000557667	CCDC146	Q8IYE0	955 aa		10.77	□□□□□ -0.69
RBM23-233	ENST00000557667	AMOT	Q4VCS5	1084 aa		10.76	□□□□□ -0.69
RBM23-233	ENST00000557667	CRBN	Q96SW2	442 aa		10.76	□□□□□ -0.69
RBM23-233	ENST00000557667	HOXB7	P09629	217 aa		10.76	□□□□□ -0.69
RBM23-233	ENST00000557667	LTK	P29376	864 aa		10.76	□□□□□ -0.69
RBM23-233	ENST00000557667	RBM19	Q9Y4C8	960 aa	Known RBP	10.76	□□□□□ -0.69
RBM23-233	ENST00000557667	FAM208A	Q9UK61	1670 aa	Known RBP	10.76	□□□□□ -0.69
RBM23-233	ENST00000557667	AMPH	P49418	695 aa		10.76	□□□□□ -0.69
RBM23-233	ENST00000557667	PHF8	Q9UPP1	1060 aa		10.76	□□□□□ -0.69
RBM23-233	ENST00000557667	SMC4	Q9NTJ3	1288 aa		10.76	□□□□□ -0.69
RBM23-233	ENST00000557667	MAP2	P11137	1827 aa	Known RBP	10.75	□□□□□ -0.69
RBM23-233	ENST00000557667	MSH6	P52701	1360 aa		10.75	□□□□□ -0.69
RBM23-233	ENST00000557667	PLEKHG5	O94827	1062 aa		10.75	□□□□□ -0.69
RBM23-233	ENST00000557667	MVP	Q14764	893 aa	Known RBP	10.75	□□□□□ -0.69
RBM23-233	ENST00000557667	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
RBM23-233	ENST00000557667	EXOC6	Q8TAG9	804 aa		10.75	□□□□□ -0.69
RBM23-233	ENST00000557667	GCC1	Q96CN9	775 aa		10.75	□□□□□ -0.69
RBM23-233	ENST00000557667	HDAC1	Q13547	482 aa	Predicted RBP	10.75	□□□□□ -0.69
RBM23-233	ENST00000557667	FAM161A	Q3B820	660 aa		10.75	□□□□□ -0.69
RBM23-233	ENST00000557667	PRKAR2B	P31323	418 aa		10.75	□□□□□ -0.69
RBM23-233	ENST00000557667	B4GALNT3	Q6L9W6	998 aa		10.75	□□□□□ -0.69
RBM23-233	ENST00000557667	DMRT2	Q9Y5R5	561 aa		10.75	□□□□□ -0.69
RBM23-233	ENST00000557667	BECN1	Q14457	450 aa		10.74	□□□□□ -0.69
RBM23-233	ENST00000557667	CDCA7L	Q96GN5	454 aa		10.74	□□□□□ -0.69
RBM23-233	ENST00000557667	RGPD1	P0DJD0	1748 aa		10.74	□□□□□ -0.69
RBM23-233	ENST00000557667	KDR	P35968	1356 aa		10.74	□□□□□ -0.69
RBM23-233	ENST00000557667	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.74	□□□□□ -0.69
RBM23-233	ENST00000557667	MED1	Q15648	1581 aa	Predicted RBP	10.74	□□□□□ -0.69
RBM23-233	ENST00000557667	ATF7IP	Q6VMQ6	1270 aa		10.74	□□□□□ -0.69
RBM23-233	ENST00000557667	KDM2B	Q8NHM5	1336 aa		10.74	□□□□□ -0.69
RBM23-233	ENST00000557667	NPM3	O75607	178 aa	Known RBP	10.73	□□□□□ -0.69
RBM23-233	ENST00000557667	HMMR	O75330	724 aa		10.73	□□□□□ -0.69
RBM23-233	ENST00000557667	TNNT2	P45379	298 aa	Predicted RBP	10.73	□□□□□ -0.69
RBM23-233	ENST00000557667	PPM1G	O15355	546 aa	Predicted RBP	10.73	□□□□□ -0.69
RBM23-233	ENST00000557667	SLIT3	O75094	1523 aa		10.72	□□□□□ -0.69
RBM23-233	ENST00000557667	ZNF853	P0CG23	659 aa		10.72	□□□□□ -0.69
RBM23-233	ENST00000557667	SALL2	Q9Y467	1007 aa	Predicted RBP	10.72	□□□□□ -0.69
RBM23-233	ENST00000557667	CADPS2	Q86UW7	1296 aa		10.71	□□□□□ -0.69
RBM23-233	ENST00000557667	C19orf44	Q9H6X5	657 aa		10.71	□□□□□ -0.69
RBM23-233	ENST00000557667	IGSF1	Q8N6C5	1336 aa		10.71	□□□□□ -0.69
RBM23-233	ENST00000557667	PXDNL	A1KZ92	1463 aa		10.71	□□□□□ -0.69
RBM23-233	ENST00000557667	HSP90AB1	P08238	724 aa	Known RBP	10.71	□□□□□ -0.69
RBM23-233	ENST00000557667	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.71	□□□□□ -0.69
RBM23-233	ENST00000557667	NME9	Q86XW9	330 aa		10.71	□□□□□ -0.7
RBM23-233	ENST00000557667	PRR36	Q9H6K5	1346 aa		10.71	□□□□□ -0.7
RBM23-233	ENST00000557667	CCT4	P50991	539 aa	Known RBP	10.7	□□□□□ -0.7
RBM23-233	ENST00000557667	STK31	Q9BXU1	1019 aa		10.7	□□□□□ -0.7
RBM23-233	ENST00000557667	ATF3	P18847	181 aa		10.7	□□□□□ -0.7
RBM23-233	ENST00000557667	IP6K1	Q92551	441 aa		10.7	□□□□□ -0.7
RBM23-233	ENST00000557667	TRIM35	Q9UPQ4	493 aa		10.69	□□□□□ -0.7
RBM23-233	ENST00000557667	PTMS	P20962	102 aa		10.69	□□□□□ -0.7
RBM23-233	ENST00000557667	ANP32E	Q9BTT0	268 aa		10.69	□□□□□ -0.7
RBM23-233	ENST00000557667	CASC1	Q6TDU7	716 aa		10.69	□□□□□ -0.7
RBM23-233	ENST00000557667	USP35	Q9P2H5	1018 aa		10.69	□□□□□ -0.7
RBM23-233	ENST00000557667	IRX6	P78412	446 aa	Predicted RBP	10.69	□□□□□ -0.7
RBM23-233	ENST00000557667	PIK3C2A	O00443	1686 aa		10.68	□□□□□ -0.7
RBM23-233	ENST00000557667	NLRP6	P59044	892 aa		10.68	□□□□□ -0.7
RBM23-233	ENST00000557667	CCDC30	Q5VVM6	783 aa		10.68	□□□□□ -0.7
RBM23-233	ENST00000557667	RPAP2	Q8IXW5	612 aa	Predicted RBP	10.68	□□□□□ -0.7
RBM23-233	ENST00000557667	IPO9	Q96P70	1041 aa	Known RBP	10.68	□□□□□ -0.7
RBM23-233	ENST00000557667	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.68	□□□□□ -0.7
RBM23-233	ENST00000557667	MAP3K5	Q99683	1374 aa		10.68	□□□□□ -0.7
RBM23-233	ENST00000557667	NPHP3	Q7Z494	1330 aa		10.68	□□□□□ -0.7
RBM23-233	ENST00000557667	EXOSC9	Q06265	439 aa	Known RBP	10.68	□□□□□ -0.7
RBM23-233	ENST00000557667	EIF4A2	Q14240	407 aa	Known RBP	10.67	□□□□□ -0.7
RBM23-233	ENST00000557667	SLC26A8	Q96RN1	970 aa		10.67	□□□□□ -0.7
RBM23-233	ENST00000557667	GNAT3	A8MTJ3	354 aa		10.67	□□□□□ -0.7
RBM23-233	ENST00000557667	BACH2	Q9BYV9	841 aa		10.67	□□□□□ -0.7
RBM23-233	ENST00000557667	CACNA1F	O60840	1977 aa		10.67	□□□□□ -0.7
RBM23-233	ENST00000557667	PDE4A	P27815	886 aa		10.66	□□□□□ -0.7
RBM23-233	ENST00000557667	TWISTNB	Q3B726	338 aa	Predicted RBP	10.66	□□□□□ -0.7

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