RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 CCNB3Q8WWL7 1395 aa7.81□□□□□ -1.16
ATXN3-247ENST00000557311 NPHP4O75161 1426 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-247ENST00000557311 MIA2Q96PC5 1412 aa7.8□□□□□ -1.16
ATXN3-247ENST00000557311 TTLL12Q14166 644 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-247ENST00000557311 KMT5BQ4FZB7 885 aa7.8□□□□□ -1.16
ATXN3-247ENST00000557311 DAXXQ9UER7 740 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-247ENST00000557311 CDC42BPBQ9Y5S2 1711 aa7.8□□□□□ -1.16
ATXN3-247ENST00000557311 ZNF644Q9H582 1327 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-247ENST00000557311 RTEL1-TNFRSF6BF6WH68 1400 aa7.79□□□□□ -1.16
ATXN3-247ENST00000557311 NRG2O14511 850 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-247ENST00000557311 CFHP08603 1231 aa7.79□□□□□ -1.16
ATXN3-247ENST00000557311 SULF1Q8IWU6 871 aa7.79□□□□□ -1.16
ATXN3-247ENST00000557311 PHOX2BQ99453 314 aa7.79□□□□□ -1.16
ATXN3-247ENST00000557311 PRR14Q9BWN1 585 aa7.79□□□□□ -1.16
ATXN3-247ENST00000557311 ATP7AQ04656 1500 aa7.78□□□□□ -1.16
ATXN3-247ENST00000557311 PREX2Q70Z35 1606 aa7.78□□□□□ -1.16
ATXN3-247ENST00000557311 POTEAQ6S8J7 498 aa7.78□□□□□ -1.16
ATXN3-247ENST00000557311 EMID1Q96A84 441 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-247ENST00000557311 SLC24A3Q9HC58 644 aa7.78□□□□□ -1.16
ATXN3-247ENST00000557311 MED14O60244 1454 aa7.78□□□□□ -1.16
ATXN3-247ENST00000557311 ITSN2Q9NZM3 1697 aa7.78□□□□□ -1.16
ATXN3-247ENST00000557311 DNMT1P26358 1616 aaKnown RBP7.78□□□□□ -1.16
ATXN3-247ENST00000557311 MYO3AQ8NEV4 1616 aa7.78□□□□□ -1.16
ATXN3-247ENST00000557311 SYCP2Q9BX26 1530 aa7.78□□□□□ -1.16
ATXN3-247ENST00000557311 PLXNC1O60486 1568 aa7.77□□□□□ -1.17
ATXN3-247ENST00000557311 ZPR1O75312 459 aa7.77□□□□□ -1.17
ATXN3-247ENST00000557311 CLCN1P35523 988 aa7.77□□□□□ -1.17
ATXN3-247ENST00000557311 AK7Q96M32 723 aa7.77□□□□□ -1.17
ATXN3-247ENST00000557311 FAM135AQ9P2D6 1515 aa7.77□□□□□ -1.17
ATXN3-247ENST00000557311 ZNF142P52746 1687 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-247ENST00000557311 CLTCQ00610 1675 aaKnown RBP7.76□□□□□ -1.17
ATXN3-247ENST00000557311 PZPP20742 1482 aa7.76□□□□□ -1.17
ATXN3-247ENST00000557311 NLRP1Q9C000 1473 aa7.76□□□□□ -1.17
ATXN3-247ENST00000557311 TSPY4P0CV99 314 aa7.76□□□□□ -1.17
ATXN3-247ENST00000557311 TSPY10P0CW01 314 aa7.76□□□□□ -1.17
ATXN3-247ENST00000557311 TXNDC2Q86VQ3 553 aa7.76□□□□□ -1.17
ATXN3-247ENST00000557311 PCDHB3Q9Y5E6 796 aa7.76□□□□□ -1.17
ATXN3-247ENST00000557311 LRRC7Q96NW7 1537 aa7.76□□□□□ -1.17
ATXN3-247ENST00000557311 VWDEQ8N2E2 1590 aa7.76□□□□□ -1.17
ATXN3-247ENST00000557311 MBD5Q9P267 1494 aa7.75□□□□□ -1.17
ATXN3-247ENST00000557311 SUPT6HQ7KZ85 1726 aaKnown RBP7.75□□□□□ -1.17
ATXN3-247ENST00000557311 MTUS2Q5JR59 1369 aa7.75□□□□□ -1.17
ATXN3-247ENST00000557311 GPCPD1Q9NPB8 672 aa7.75□□□□□ -1.17
ATXN3-247ENST00000557311 PDZRN3Q9UPQ7 1066 aa7.75□□□□□ -1.17
ATXN3-247ENST00000557311 FAM135BQ49AJ0 1406 aa7.75□□□□□ -1.17
ATXN3-247ENST00000557311 NEURL4Q96JN8 1562 aa7.75□□□□□ -1.17
ATXN3-247ENST00000557311 SLC10A3P09131 477 aa7.74□□□□□ -1.17
ATXN3-247ENST00000557311 BLOC1S3Q6QNY0 202 aa7.74□□□□□ -1.17
ATXN3-247ENST00000557311 ALKQ9UM73 1620 aa7.74□□□□□ -1.17
ATXN3-247ENST00000557311 UGGT1Q9NYU2 1555 aa7.73□□□□□ -1.17
ATXN3-247ENST00000557311 LTKP29376 864 aa7.73□□□□□ -1.17
ATXN3-247ENST00000557311 TPRNQ4KMQ1 711 aa7.73□□□□□ -1.17
ATXN3-247ENST00000557311 TRIM67Q6ZTA4 783 aa7.73□□□□□ -1.17
ATXN3-247ENST00000557311 TMUB1Q9BVT8 246 aa7.73□□□□□ -1.17
ATXN3-247ENST00000557311 EID1Q9Y6B2 187 aa7.73□□□□□ -1.17
ATXN3-247ENST00000557311 FYCO1Q9BQS8 1478 aa7.73□□□□□ -1.17
ATXN3-247ENST00000557311 INO80Q9ULG1 1556 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-247ENST00000557311 RNF223E7ERA6 249 aa7.72□□□□□ -1.17
ATXN3-247ENST00000557311 TLL1O43897 1013 aa7.72□□□□□ -1.17
ATXN3-247ENST00000557311 CDC42BPAQ5VT25 1732 aa7.72□□□□□ -1.17
ATXN3-247ENST00000557311 PPEF1O14829 653 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-247ENST00000557311 TRIM66O15016 1216 aa7.71□□□□□ -1.18
ATXN3-247ENST00000557311 KCNA6P17658 529 aa7.71□□□□□ -1.18
ATXN3-247ENST00000557311 GGCXP38435 758 aa7.71□□□□□ -1.18
ATXN3-247ENST00000557311 PROSER2Q86WR7 435 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-247ENST00000557311 KDM5DQ9BY66 1539 aa7.71□□□□□ -1.18
ATXN3-247ENST00000557311 PUS10Q3MIT2 529 aaKnown RBP7.7□□□□□ -1.18
ATXN3-247ENST00000557311 NUTM1Q86Y26 1132 aa7.7□□□□□ -1.18
ATXN3-247ENST00000557311 DEPDC5O75140 1603 aa7.7□□□□□ -1.18
ATXN3-247ENST00000557311 ACTN4O43707 911 aaKnown RBP7.69□□□□□ -1.18
ATXN3-247ENST00000557311 NR1I2O75469 434 aa7.69□□□□□ -1.18
ATXN3-247ENST00000557311 SSTR3P32745 418 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-247ENST00000557311 GRIPAP1Q4V328 841 aa7.69□□□□□ -1.18
ATXN3-247ENST00000557311 TMEM94Q12767 1356 aa7.69□□□□□ -1.18
ATXN3-247ENST00000557311 LRRIQ1Q96JM4 1722 aa7.69□□□□□ -1.18
ATXN3-247ENST00000557311 CCDC141Q6ZP82 1450 aa7.68□□□□□ -1.18
ATXN3-247ENST00000557311 ADGBQ8N7X0 1667 aa7.68□□□□□ -1.18
ATXN3-247ENST00000557311 SLC19A1P41440 591 aa7.68□□□□□ -1.18
ATXN3-247ENST00000557311 GCGRP47871 477 aa7.68□□□□□ -1.18
ATXN3-247ENST00000557311 PDE4DQ08499 809 aa7.68□□□□□ -1.18
ATXN3-247ENST00000557311 FUT2Q10981 343 aa7.68□□□□□ -1.18
ATXN3-247ENST00000557311 ZNF772Q68DY9 489 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-247ENST00000557311 ZNF787Q6DD87 383 aa7.68□□□□□ -1.18
ATXN3-247ENST00000557311 GIGYF2Q6Y7W6 1299 aaKnown RBP7.68□□□□□ -1.18
ATXN3-247ENST00000557311 SLAIN2Q9P270 581 aa7.68□□□□□ -1.18
ATXN3-247ENST00000557311 CEP162Q5TB80 1403 aa7.68□□□□□ -1.18
ATXN3-247ENST00000557311 SCAF11Q99590 1463 aaKnown RBP7.68□□□□□ -1.18
ATXN3-247ENST00000557311 S1PR4O95977 384 aa7.67□□□□□ -1.18
ATXN3-247ENST00000557311 AMHR2Q16671 573 aa7.67□□□□□ -1.18
ATXN3-247ENST00000557311 LIAT1Q6ZQX7 453 aa7.67□□□□□ -1.18
ATXN3-247ENST00000557311 FAM217BQ9NTX9 383 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-247ENST00000557311 JCADQ9P266 1359 aa7.67□□□□□ -1.18
ATXN3-247ENST00000557311 KDM4AO75164 1064 aa7.66□□□□□ -1.18
ATXN3-247ENST00000557311 CD46P15529 392 aa7.66□□□□□ -1.18
ATXN3-247ENST00000557311 ATP6V1AP38606 617 aa7.66□□□□□ -1.18
ATXN3-247ENST00000557311 SPRYD7Q5W111 196 aa7.66□□□□□ -1.18
ATXN3-247ENST00000557311 PARP9Q8IXQ6 854 aa7.66□□□□□ -1.18
ATXN3-247ENST00000557311 SLC26A8Q96RN1 970 aa7.66□□□□□ -1.18
ATXN3-247ENST00000557311 REPIN1Q9BWE0 567 aaKnown RBP7.66□□□□□ -1.18
ATXN3-247ENST00000557311 TMEM2Q9UHN6 1383 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms