RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 BCL11AQ9H165 835 aa24.57■■□□□ 1.52
FOXN3-214ENST00000557258 NUTM2GQ5VZR2 741 aa24.57■■□□□ 1.52
FOXN3-214ENST00000557258 CT47B1P0C2W7 299 aaPredicted RBP24.56■■□□□ 1.52
FOXN3-214ENST00000557258 EIF4A2Q14240 407 aaKnown RBP24.56■■□□□ 1.52
FOXN3-214ENST00000557258 ZNF692Q9BU19 519 aaPredicted RBP24.56■■□□□ 1.52
FOXN3-214ENST00000557258 C1orf115Q9H7X2 142 aa24.56■■□□□ 1.52
FOXN3-214ENST00000557258 PLEKHG1Q9ULL1 1385 aa24.55■■□□□ 1.52
FOXN3-214ENST00000557258 DAXXQ9UER7 740 aaPredicted RBP24.55■■□□□ 1.52
FOXN3-214ENST00000557258 KRT24Q2M2I5 525 aa24.54■■□□□ 1.52
FOXN3-214ENST00000557258 CDK12Q9NYV4 1490 aaPredicted RBP24.54■■□□□ 1.52
FOXN3-214ENST00000557258 SIRT1Q96EB6 747 aa24.54■■□□□ 1.52
FOXN3-214ENST00000557258 DDRGK1Q96HY6 314 aa24.54■■□□□ 1.52
FOXN3-214ENST00000557258 RTL5Q5HYW3 569 aaPredicted RBP24.53■■□□□ 1.52
FOXN3-214ENST00000557258 C8orf58Q8NAV2 365 aa24.53■■□□□ 1.52
FOXN3-214ENST00000557258 DDX19BQ9UMR2 479 aa24.53■■□□□ 1.52
FOXN3-214ENST00000557258 VAMP4O75379 141 aa24.52■■□□□ 1.52
FOXN3-214ENST00000557258 DEKP35659 375 aaKnown RBP24.52■■□□□ 1.52
FOXN3-214ENST00000557258 MCM10Q7L590 875 aa24.52■■□□□ 1.52
FOXN3-214ENST00000557258 AATKQ6ZMQ8 1374 aa24.52■■□□□ 1.52
FOXN3-214ENST00000557258 NGDNQ8NEJ9 315 aaKnown RBP24.51■■□□□ 1.51
FOXN3-214ENST00000557258 MON2Q7Z3U7 1717 aa24.51■■□□□ 1.51
FOXN3-214ENST00000557258 KIF16BQ96L93 1317 aa24.51■■□□□ 1.51
FOXN3-214ENST00000557258 KNDC1Q76NI1 1749 aa24.5■■□□□ 1.51
FOXN3-214ENST00000557258 USP19O94966 1318 aa24.5■■□□□ 1.51
FOXN3-214ENST00000557258 ITSN1Q15811 1721 aa24.49■■□□□ 1.51
FOXN3-214ENST00000557258 C3P01024 1663 aa24.49■■□□□ 1.51
FOXN3-214ENST00000557258 TWISTNBQ3B726 338 aaPredicted RBP24.48■■□□□ 1.51
FOXN3-214ENST00000557258 IPO8O15397 1037 aaKnown RBP24.48■■□□□ 1.51
FOXN3-214ENST00000557258 PLEKHG5O94827 1062 aa24.48■■□□□ 1.51
FOXN3-214ENST00000557258 GNAI1P63096 354 aa24.48■■□□□ 1.51
FOXN3-214ENST00000557258 ZBTB40Q9NUA8 1239 aa24.48■■□□□ 1.51
FOXN3-214ENST00000557258 MIS18AQ9NYP9 233 aa24.48■■□□□ 1.51
FOXN3-214ENST00000557258 USP6P35125 1406 aa24.47■■□□□ 1.51
FOXN3-214ENST00000557258 IFT57Q9NWB7 429 aa24.47■■□□□ 1.51
FOXN3-214ENST00000557258 FOXO3O43524 673 aa24.47■■□□□ 1.51
FOXN3-214ENST00000557258 KCNA6P17658 529 aa24.46■■□□□ 1.51
FOXN3-214ENST00000557258 PLEKHG3A1L390 1219 aa24.46■■□□□ 1.51
FOXN3-214ENST00000557258 MRPL50Q8N5N7 158 aaKnown RBP24.46■■□□□ 1.51
FOXN3-214ENST00000557258 AKAP12Q02952 1782 aa24.46■■□□□ 1.51
FOXN3-214ENST00000557258 AAMPQ13685 434 aa24.45■■□□□ 1.5
FOXN3-214ENST00000557258 ALDH1L2Q3SY69 923 aa24.45■■□□□ 1.5
FOXN3-214ENST00000557258 CFAP44Q96MT7 982 aa24.44■■□□□ 1.5
FOXN3-214ENST00000557258 ZNF853P0CG23 659 aa24.44■■□□□ 1.5
FOXN3-214ENST00000557258 MAP3K19Q56UN5 1328 aa24.44■■□□□ 1.5
FOXN3-214ENST00000557258 THEMISQ8N1K5 641 aaPredicted RBP24.43■■□□□ 1.5
FOXN3-214ENST00000557258 LNPKQ9C0E8 428 aa24.43■■□□□ 1.5
FOXN3-214ENST00000557258 C14orf37Q86TY3 774 aa24.43■■□□□ 1.5
FOXN3-214ENST00000557258 CALD1Q05682 793 aaKnown RBP24.42■■□□□ 1.5
FOXN3-214ENST00000557258 DLG5Q8TDM6 1919 aa24.42■■□□□ 1.5
FOXN3-214ENST00000557258 OVOS2A0A0J9YW53 1432 aa24.42■■□□□ 1.5
FOXN3-214ENST00000557258 OVOS2Q6IE36 1432 aa24.42■■□□□ 1.5
FOXN3-214ENST00000557258 HDAC1Q13547 482 aaPredicted RBP24.4■■□□□ 1.5
FOXN3-214ENST00000557258 TBX22Q9Y458 520 aa24.4■■□□□ 1.5
FOXN3-214ENST00000557258 LTV1Q96GA3 475 aaPredicted RBP24.39■■□□□ 1.5
FOXN3-214ENST00000557258 NLRP6P59044 892 aa24.39■■□□□ 1.49
FOXN3-214ENST00000557258 LMOD3Q0VAK6 560 aa24.39■■□□□ 1.49
FOXN3-214ENST00000557258 AMPHP49418 695 aa24.38■■□□□ 1.49
FOXN3-214ENST00000557258 RGPD8O14715 1765 aaPredicted RBP24.38■■□□□ 1.49
FOXN3-214ENST00000557258 PEAK1Q9H792 1746 aa24.38■■□□□ 1.49
FOXN3-214ENST00000557258 ZBTB7BO15156 539 aaPredicted RBP24.37■■□□□ 1.49
FOXN3-214ENST00000557258 MFAP1P55081 439 aaKnown RBP24.37■■□□□ 1.49
FOXN3-214ENST00000557258 FER1L4A9Z1Z3 1794 aa24.36■■□□□ 1.49
FOXN3-214ENST00000557258 NRKQ7Z2Y5 1582 aa24.35■■□□□ 1.49
FOXN3-214ENST00000557258 MTHFSDQ2M296 383 aaKnown RBP24.34■■□□□ 1.49
FOXN3-214ENST00000557258 SMC5Q8IY18 1101 aa24.34■■□□□ 1.49
FOXN3-214ENST00000557258 TOPAZ1Q8N9V7 1692 aa24.34■■□□□ 1.49
FOXN3-214ENST00000557258 ZBTB7CA1YPR0 619 aa24.34■■□□□ 1.49
FOXN3-214ENST00000557258 SLKQ9H2G2 1235 aaPredicted RBP24.34■■□□□ 1.49
FOXN3-214ENST00000557258 ANKRD45Q5TZF3 282 aa24.33■■□□□ 1.49
FOXN3-214ENST00000557258 SPRYD3Q8NCJ5 442 aa24.33■■□□□ 1.49
FOXN3-214ENST00000557258 ARHGAP23Q9P227 1491 aa24.32■■□□□ 1.48
FOXN3-214ENST00000557258 DIP2AQ14689 1571 aa24.32■■□□□ 1.48
FOXN3-214ENST00000557258 RIMS1Q86UR5 1692 aaKnown RBP24.32■■□□□ 1.48
FOXN3-214ENST00000557258 EYA1Q99502 592 aa24.32■■□□□ 1.48
FOXN3-214ENST00000557258 SLIT1O75093 1534 aa24.32■■□□□ 1.48
FOXN3-214ENST00000557258 NFKBIBQ15653 356 aa24.32■■□□□ 1.48
FOXN3-214ENST00000557258 SIRT2Q8IXJ6 389 aa24.32■■□□□ 1.48
FOXN3-214ENST00000557258 ABTB2Q8N961 1025 aa24.31■■□□□ 1.48
FOXN3-214ENST00000557258 UPF2Q9HAU5 1272 aaKnown RBP24.31■■□□□ 1.48
FOXN3-214ENST00000557258 SSH2Q76I76 1423 aa24.31■■□□□ 1.48
FOXN3-214ENST00000557258 USHBP1Q8N6Y0 703 aa24.3■■□□□ 1.48
FOXN3-214ENST00000557258 VIRMAQ69YN4 1812 aaKnown RBP24.3■■□□□ 1.48
FOXN3-214ENST00000557258 ZNF428Q96B54 188 aa24.3■■□□□ 1.48
FOXN3-214ENST00000557258 USP31Q70CQ4 1352 aa24.3■■□□□ 1.48
FOXN3-214ENST00000557258 NECTIN2Q92692 538 aa24.29■■□□□ 1.48
FOXN3-214ENST00000557258 ABCC4O15439 1325 aa24.29■■□□□ 1.48
FOXN3-214ENST00000557258 NUCB1Q02818 461 aa24.28■■□□□ 1.48
FOXN3-214ENST00000557258 CHD1LQ86WJ1 897 aa24.28■■□□□ 1.48
FOXN3-214ENST00000557258 BRPF1P55201 1214 aaPredicted RBP24.28■■□□□ 1.48
FOXN3-214ENST00000557258 TBC1D32Q96NH3 1257 aa24.28■■□□□ 1.48
FOXN3-214ENST00000557258 PTCH1Q13635 1447 aa24.27■■□□□ 1.48
FOXN3-214ENST00000557258 CHL1O00533 1208 aa24.27■■□□□ 1.48
FOXN3-214ENST00000557258 APBB1O00213 710 aa24.27■■□□□ 1.48
FOXN3-214ENST00000557258 TTC21AQ8NDW8 1320 aa24.26■■□□□ 1.47
FOXN3-214ENST00000557258 ARHGAP45Q92619 1136 aa24.26■■□□□ 1.47
FOXN3-214ENST00000557258 FLT4P35916 1363 aa24.26■■□□□ 1.47
FOXN3-214ENST00000557258 FRAT2O75474 233 aaPredicted RBP24.26■■□□□ 1.47
FOXN3-214ENST00000557258 XPCQ01831 940 aaPredicted RBP24.26■■□□□ 1.47
FOXN3-214ENST00000557258 RTF1Q92541 710 aaKnown RBP24.26■■□□□ 1.47
FOXN3-214ENST00000557258 TSPYL4Q9UJ04 414 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms