RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 AFF2P51816 1311 aa14.17□□□□□ -0.14
HNRNPC-228ENST00000557033 SPDYE16A6NNV3 312 aaPredicted RBP14.17□□□□□ -0.14
HNRNPC-228ENST00000557033 NGLY1Q96IV0 654 aa14.17□□□□□ -0.14
HNRNPC-228ENST00000557033 KIF1AQ12756 1690 aa14.17□□□□□ -0.14
HNRNPC-228ENST00000557033 COL22A1Q8NFW1 1626 aaPredicted RBP14.16□□□□□ -0.14
HNRNPC-228ENST00000557033 ADAMTS2O95450 1211 aa14.16□□□□□ -0.14
HNRNPC-228ENST00000557033 PSME1Q06323 249 aa14.16□□□□□ -0.14
HNRNPC-228ENST00000557033 PPP1R15BQ5SWA1 713 aa14.16□□□□□ -0.14
HNRNPC-228ENST00000557033 KRT28Q7Z3Y7 464 aa14.16□□□□□ -0.14
HNRNPC-228ENST00000557033 PLEKHG3A1L390 1219 aa14.15□□□□□ -0.14
HNRNPC-228ENST00000557033 GPR37O15354 613 aa14.15□□□□□ -0.14
HNRNPC-228ENST00000557033 XPCQ01831 940 aaPredicted RBP14.15□□□□□ -0.14
HNRNPC-228ENST00000557033 ANKARQ7Z5J8 1434 aa14.15□□□□□ -0.14
HNRNPC-228ENST00000557033 SPATA31A3Q5VYP0 1347 aa14.15□□□□□ -0.15
HNRNPC-228ENST00000557033 RGPD8O14715 1765 aaPredicted RBP14.14□□□□□ -0.15
HNRNPC-228ENST00000557033 EIF3AQ14152 1382 aaKnown RBP14.14□□□□□ -0.15
HNRNPC-228ENST00000557033 FNBP4Q8N3X1 1017 aaPredicted RBP14.14□□□□□ -0.15
HNRNPC-228ENST00000557033 QTRT2Q9H974 415 aaKnown RBP14.14□□□□□ -0.15
HNRNPC-228ENST00000557033 GPHNQ9NQX3 736 aaPredicted RBP14.14□□□□□ -0.15
HNRNPC-228ENST00000557033 MINK1Q8N4C8 1332 aaPredicted RBP14.14□□□□□ -0.15
HNRNPC-228ENST00000557033 ADGRB2O60241 1585 aa14.13□□□□□ -0.15
HNRNPC-228ENST00000557033 WASLO00401 505 aaPredicted RBP14.13□□□□□ -0.15
HNRNPC-228ENST00000557033 DPYSL4O14531 572 aa14.13□□□□□ -0.15
HNRNPC-228ENST00000557033 FLIIQ13045 1269 aa14.13□□□□□ -0.15
HNRNPC-228ENST00000557033 DDRGK1Q96HY6 314 aa14.13□□□□□ -0.15
HNRNPC-228ENST00000557033 KIAA1210Q9ULL0 1709 aa14.12□□□□□ -0.15
HNRNPC-228ENST00000557033 APBB1O00213 710 aa14.12□□□□□ -0.15
HNRNPC-228ENST00000557033 PRKAR2AP13861 404 aaKnown RBP14.12□□□□□ -0.15
HNRNPC-228ENST00000557033 RBM6P78332 1123 aaKnown RBP14.12□□□□□ -0.15
HNRNPC-228ENST00000557033 PDIA6Q15084 440 aa14.12□□□□□ -0.15
HNRNPC-228ENST00000557033 HIRIP3Q9BW71 556 aaPredicted RBP14.12□□□□□ -0.15
HNRNPC-228ENST00000557033 EMILIN3Q9NT22 766 aa14.12□□□□□ -0.15
HNRNPC-228ENST00000557033 CDK12Q9NYV4 1490 aaPredicted RBP14.12□□□□□ -0.15
HNRNPC-228ENST00000557033 USP21Q9UK80 565 aa14.11□□□□□ -0.15
HNRNPC-228ENST00000557033 SBNO1A3KN83 1393 aa14.1□□□□□ -0.15
HNRNPC-228ENST00000557033 PMFBP1Q8TBY8 1022 aa14.1□□□□□ -0.15
HNRNPC-228ENST00000557033 TRPC5Q9UL62 973 aaPredicted RBP14.1□□□□□ -0.15
HNRNPC-228ENST00000557033 USP32Q8NFA0 1604 aa14.09□□□□□ -0.15
HNRNPC-228ENST00000557033 NPM2Q86SE8 214 aaKnown RBP14.09□□□□□ -0.15
HNRNPC-228ENST00000557033 L3MBTL2Q969R5 705 aa14.09□□□□□ -0.15
HNRNPC-228ENST00000557033 ARHGEF28Q8N1W1 1705 aaKnown RBP14.08□□□□□ -0.16
HNRNPC-228ENST00000557033 NBPF1Q3BBV0 1214 aa14.08□□□□□ -0.16
HNRNPC-228ENST00000557033 TULP4Q9NRJ4 1543 aa14.08□□□□□ -0.16
HNRNPC-228ENST00000557033 PRR36Q9H6K5 1346 aa14.08□□□□□ -0.16
HNRNPC-228ENST00000557033 TNS3Q68CZ2 1445 aa14.07□□□□□ -0.16
HNRNPC-228ENST00000557033 MARF1Q9Y4F3 1742 aaKnown RBP14.07□□□□□ -0.16
HNRNPC-228ENST00000557033 GOLGA2Q08379 1002 aa14.07□□□□□ -0.16
HNRNPC-228ENST00000557033 SIN3AQ96ST3 1273 aa14.07□□□□□ -0.16
HNRNPC-228ENST00000557033 ARHGEF10O15013 1369 aa14.07□□□□□ -0.16
HNRNPC-228ENST00000557033 GPRASP1Q5JY77 1395 aa14.07□□□□□ -0.16
HNRNPC-228ENST00000557033 AMHR2Q16671 573 aa14.06□□□□□ -0.16
HNRNPC-228ENST00000557033 NUDT16Q96DE0 195 aaKnown RBP14.06□□□□□ -0.16
HNRNPC-228ENST00000557033 CDK19Q9BWU1 502 aa14.06□□□□□ -0.16
HNRNPC-228ENST00000557033 IRF6O14896 467 aa14.05□□□□□ -0.16
HNRNPC-228ENST00000557033 NEUROD1Q13562 356 aa14.05□□□□□ -0.16
HNRNPC-228ENST00000557033 NGDNQ8NEJ9 315 aaKnown RBP14.05□□□□□ -0.16
HNRNPC-228ENST00000557033 BCL9LQ86UU0 1499 aa14.05□□□□□ -0.16
HNRNPC-228ENST00000557033 MAP2K5Q13163 448 aa14.04□□□□□ -0.16
HNRNPC-228ENST00000557033 UPF1Q92900 1129 aaKnown RBP eCLIP14.04□□□□□ -0.16
HNRNPC-228ENST00000557033 CCDC102AQ96A19 550 aa14.04□□□□□ -0.16
HNRNPC-228ENST00000557033 ATRNO75882 1429 aa14.04□□□□□ -0.16
HNRNPC-228ENST00000557033 ONECUT3O60422 494 aaPredicted RBP14.03□□□□□ -0.16
HNRNPC-228ENST00000557033 UNC5CLQ8IV45 518 aa14.03□□□□□ -0.16
HNRNPC-228ENST00000557033 GOPCQ9HD26 462 aa14.03□□□□□ -0.16
HNRNPC-228ENST00000557033 CENPJQ9HC77 1338 aaPredicted RBP14.02□□□□□ -0.17
HNRNPC-228ENST00000557033 PARP9Q8IXQ6 854 aa14.02□□□□□ -0.17
HNRNPC-228ENST00000557033 CABLES1Q8TDN4 633 aa14.02□□□□□ -0.17
HNRNPC-228ENST00000557033 GJD4Q96KN9 370 aaPredicted RBP14.02□□□□□ -0.17
HNRNPC-228ENST00000557033 ITSN1Q15811 1721 aa14.01□□□□□ -0.17
HNRNPC-228ENST00000557033 SLIT2O94813 1529 aa14.01□□□□□ -0.17
HNRNPC-228ENST00000557033 ATP7BP35670 1465 aa14.01□□□□□ -0.17
HNRNPC-228ENST00000557033 RGS12O14924 1447 aa14.01□□□□□ -0.17
HNRNPC-228ENST00000557033 TMEM106CQ9BVX2 250 aa14.01□□□□□ -0.17
HNRNPC-228ENST00000557033 TRPM3Q9HCF6 1732 aaPredicted RBP14.01□□□□□ -0.17
HNRNPC-228ENST00000557033 DSG2Q14126 1118 aa14□□□□□ -0.17
HNRNPC-228ENST00000557033 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.99□□□□□ -0.17
HNRNPC-228ENST00000557033 A6NJR5 290 aa13.99□□□□□ -0.17
HNRNPC-228ENST00000557033 PDIA4P13667 645 aaKnown RBP13.99□□□□□ -0.17
HNRNPC-228ENST00000557033 FXR2P51116 673 aaKnown RBP eCLIP13.99□□□□□ -0.17
HNRNPC-228ENST00000557033 NBPF8Q3BBV2 869 aa13.99□□□□□ -0.17
HNRNPC-228ENST00000557033 POLR3AO14802 1390 aaPredicted RBP13.98□□□□□ -0.17
HNRNPC-228ENST00000557033 ALS2Q96Q42 1657 aa13.98□□□□□ -0.17
HNRNPC-228ENST00000557033 FAM83GA6ND36 823 aa13.98□□□□□ -0.17
HNRNPC-228ENST00000557033 SRPK2P78362 688 aaKnown RBP13.98□□□□□ -0.17
HNRNPC-228ENST00000557033 TRPM1Q7Z4N2 1603 aa13.97□□□□□ -0.17
HNRNPC-228ENST00000557033 ACEP12821 1306 aa13.97□□□□□ -0.17
HNRNPC-228ENST00000557033 VPS72Q15906 364 aa13.97□□□□□ -0.17
HNRNPC-228ENST00000557033 NWD2Q9ULI1 1742 aa13.96□□□□□ -0.17
HNRNPC-228ENST00000557033 ROCK2O75116 1388 aaKnown RBP13.96□□□□□ -0.18
HNRNPC-228ENST00000557033 ATAD2Q6PL18 1390 aa13.96□□□□□ -0.18
HNRNPC-228ENST00000557033 ABCA3Q99758 1704 aa13.95□□□□□ -0.18
HNRNPC-228ENST00000557033 TOPAZ1Q8N9V7 1692 aa13.95□□□□□ -0.18
HNRNPC-228ENST00000557033 TRAK2O60296 914 aa13.95□□□□□ -0.18
HNRNPC-228ENST00000557033 QRICH2Q9H0J4 1663 aa13.95□□□□□ -0.18
HNRNPC-228ENST00000557033 EVC2Q86UK5 1308 aa13.94□□□□□ -0.18
HNRNPC-228ENST00000557033 GNPATO15228 680 aa13.94□□□□□ -0.18
HNRNPC-228ENST00000557033 BRD4O60885 1362 aaPredicted RBP13.94□□□□□ -0.18
HNRNPC-228ENST00000557033 RALGAPBQ86X10 1494 aa13.93□□□□□ -0.18
HNRNPC-228ENST00000557033 PPIP5K1Q6PFW1 1433 aa13.93□□□□□ -0.18
HNRNPC-228ENST00000557033 GRXCR2A6NFK2 248 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms