RNA–Protein interactions for RNA: ENST00000556245.1

PRKCH-221, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-221ENST00000556245 IFT57Q9NWB7 429 aa14.79□□□□□ -0.04
PRKCH-221ENST00000556245 BECN1Q14457 450 aa14.79□□□□□ -0.04
PRKCH-221ENST00000556245 CHMP4BQ9H444 224 aaKnown RBP14.79□□□□□ -0.04
PRKCH-221ENST00000556245 SEC24BO95487 1268 aa14.78□□□□□ -0.04
PRKCH-221ENST00000556245 ZRANB1Q9UGI0 708 aa14.78□□□□□ -0.04
PRKCH-221ENST00000556245 ZBTB40Q9NUA8 1239 aa14.78□□□□□ -0.04
PRKCH-221ENST00000556245 NCKAP5LQ9HCH0 1330 aa14.77□□□□□ -0.05
PRKCH-221ENST00000556245 ADAMTS13Q76LX8 1427 aa14.77□□□□□ -0.05
PRKCH-221ENST00000556245 ROBO2Q9HCK4 1378 aa14.76□□□□□ -0.05
PRKCH-221ENST00000556245 PRR36Q9H6K5 1346 aa14.76□□□□□ -0.05
PRKCH-221ENST00000556245 PLEKHG1Q9ULL1 1385 aa14.76□□□□□ -0.05
PRKCH-221ENST00000556245 NFKBIBQ15653 356 aa14.76□□□□□ -0.05
PRKCH-221ENST00000556245 SMC5Q8IY18 1101 aa14.76□□□□□ -0.05
PRKCH-221ENST00000556245 ARHGAP45Q92619 1136 aa14.76□□□□□ -0.05
PRKCH-221ENST00000556245 VAMP4O75379 141 aa14.75□□□□□ -0.05
PRKCH-221ENST00000556245 RRS1Q15050 365 aaKnown RBP14.75□□□□□ -0.05
PRKCH-221ENST00000556245 ZNF853P0CG23 659 aa14.75□□□□□ -0.05
PRKCH-221ENST00000556245 THUMPD2Q9BTF0 503 aaKnown RBP14.74□□□□□ -0.05
PRKCH-221ENST00000556245 CFAP44Q96MT7 982 aa14.74□□□□□ -0.05
PRKCH-221ENST00000556245 TBC1D32Q96NH3 1257 aa14.74□□□□□ -0.05
PRKCH-221ENST00000556245 MRPL50Q8N5N7 158 aaKnown RBP14.73□□□□□ -0.05
PRKCH-221ENST00000556245 MBIPQ9NS73 344 aa14.73□□□□□ -0.05
PRKCH-221ENST00000556245 PTCH1Q13635 1447 aa14.73□□□□□ -0.05
PRKCH-221ENST00000556245 TTC21BQ7Z4L5 1316 aa14.73□□□□□ -0.05
PRKCH-221ENST00000556245 NRKQ7Z2Y5 1582 aa14.73□□□□□ -0.05
PRKCH-221ENST00000556245 DLG5Q8TDM6 1919 aa14.73□□□□□ -0.05
PRKCH-221ENST00000556245 PLEKHG3A1L390 1219 aa14.72□□□□□ -0.05
PRKCH-221ENST00000556245 TOPAZ1Q8N9V7 1692 aa14.72□□□□□ -0.05
PRKCH-221ENST00000556245 EID1Q9Y6B2 187 aa14.72□□□□□ -0.05
PRKCH-221ENST00000556245 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.72□□□□□ -0.05
PRKCH-221ENST00000556245 PIK3R4Q99570 1358 aa14.72□□□□□ -0.05
PRKCH-221ENST00000556245 TWISTNBQ3B726 338 aaPredicted RBP14.72□□□□□ -0.05
PRKCH-221ENST00000556245 ACEP12821 1306 aa14.71□□□□□ -0.05
PRKCH-221ENST00000556245 LTKP29376 864 aa14.71□□□□□ -0.06
PRKCH-221ENST00000556245 TSPYL6Q8N831 410 aa14.71□□□□□ -0.06
PRKCH-221ENST00000556245 OVOS2A0A0J9YW53 1432 aa14.7□□□□□ -0.06
PRKCH-221ENST00000556245 USP6P35125 1406 aa14.7□□□□□ -0.06
PRKCH-221ENST00000556245 OVOS2Q6IE36 1432 aa14.7□□□□□ -0.06
PRKCH-221ENST00000556245 HAP1P54257 671 aaPredicted RBP14.7□□□□□ -0.06
PRKCH-221ENST00000556245 ZBTB7BO15156 539 aaPredicted RBP14.69□□□□□ -0.06
PRKCH-221ENST00000556245 NUCB1Q02818 461 aa14.69□□□□□ -0.06
PRKCH-221ENST00000556245 API5Q9BZZ5 524 aaKnown RBP14.69□□□□□ -0.06
PRKCH-221ENST00000556245 EIF4A2Q14240 407 aaKnown RBP14.69□□□□□ -0.06
PRKCH-221ENST00000556245 ELL2O00472 640 aaPredicted RBP14.68□□□□□ -0.06
PRKCH-221ENST00000556245 ABCC4O15439 1325 aa14.68□□□□□ -0.06
PRKCH-221ENST00000556245 SULT6B1Q6IMI4 303 aa14.68□□□□□ -0.06
PRKCH-221ENST00000556245 GCC1Q96CN9 775 aa14.68□□□□□ -0.06
PRKCH-221ENST00000556245 NALCNQ8IZF0 1738 aa14.67□□□□□ -0.06
PRKCH-221ENST00000556245 FAM83GA6ND36 823 aa14.67□□□□□ -0.06
PRKCH-221ENST00000556245 CHD1LQ86WJ1 897 aa14.67□□□□□ -0.06
PRKCH-221ENST00000556245 C8orf58Q8NAV2 365 aa14.67□□□□□ -0.06
PRKCH-221ENST00000556245 USP31Q70CQ4 1352 aa14.66□□□□□ -0.06
PRKCH-221ENST00000556245 SLIT1O75093 1534 aa14.66□□□□□ -0.06
PRKCH-221ENST00000556245 PTPRUQ92729 1446 aa14.66□□□□□ -0.06
PRKCH-221ENST00000556245 TTC21AQ8NDW8 1320 aa14.66□□□□□ -0.06
PRKCH-221ENST00000556245 NUTM2FA1L443 756 aa14.66□□□□□ -0.06
PRKCH-221ENST00000556245 SLC26A8Q96RN1 970 aa14.66□□□□□ -0.06
PRKCH-221ENST00000556245 C22orf23Q9BZE7 217 aa14.66□□□□□ -0.06
PRKCH-221ENST00000556245 TBX22Q9Y458 520 aa14.65□□□□□ -0.06
PRKCH-221ENST00000556245 KIF24Q5T7B8 1368 aa14.65□□□□□ -0.06
PRKCH-221ENST00000556245 MFAP1P55081 439 aaKnown RBP14.65□□□□□ -0.06
PRKCH-221ENST00000556245 DCTN1Q14203 1278 aa14.65□□□□□ -0.06
PRKCH-221ENST00000556245 GSE1Q14687 1217 aa14.65□□□□□ -0.06
PRKCH-221ENST00000556245 AEBP1Q8IUX7 1158 aa14.65□□□□□ -0.06
PRKCH-221ENST00000556245 LNPKQ9C0E8 428 aa14.65□□□□□ -0.06
PRKCH-221ENST00000556245 AMOTL2Q9Y2J4 779 aa14.65□□□□□ -0.06
PRKCH-221ENST00000556245 ARHGAP23Q9P227 1491 aa14.65□□□□□ -0.06
PRKCH-221ENST00000556245 CEBPAP49715 358 aaPredicted RBP14.65□□□□□ -0.07
PRKCH-221ENST00000556245 FRAT2O75474 233 aaPredicted RBP14.64□□□□□ -0.07
PRKCH-221ENST00000556245 SSH2Q76I76 1423 aa14.64□□□□□ -0.07
PRKCH-221ENST00000556245 TBC1D2Q9BYX2 928 aa14.64□□□□□ -0.07
PRKCH-221ENST00000556245 HSP90AB2PQ58FF8 381 aa14.63□□□□□ -0.07
PRKCH-221ENST00000556245 ANKRD45Q5TZF3 282 aa14.63□□□□□ -0.07
PRKCH-221ENST00000556245 RGPD1P0DJD0 1748 aa14.63□□□□□ -0.07
PRKCH-221ENST00000556245 PEAK1Q9H792 1746 aa14.63□□□□□ -0.07
PRKCH-221ENST00000556245 DIP2AQ14689 1571 aa14.62□□□□□ -0.07
PRKCH-221ENST00000556245 CHL1O00533 1208 aa14.62□□□□□ -0.07
PRKCH-221ENST00000556245 ARHGEF10O15013 1369 aa14.62□□□□□ -0.07
PRKCH-221ENST00000556245 KIAA0232Q92628 1395 aa14.62□□□□□ -0.07
PRKCH-221ENST00000556245 BMP2KLQ5H9B9 411 aa14.62□□□□□ -0.07
PRKCH-221ENST00000556245 THEMISQ8N1K5 641 aaPredicted RBP14.62□□□□□ -0.07
PRKCH-221ENST00000556245 SLKQ9H2G2 1235 aaPredicted RBP14.62□□□□□ -0.07
PRKCH-221ENST00000556245 C1orf115Q9H7X2 142 aa14.62□□□□□ -0.07
PRKCH-221ENST00000556245 FLT4P35916 1363 aa14.6□□□□□ -0.07
PRKCH-221ENST00000556245 NGDNQ8NEJ9 315 aaKnown RBP14.6□□□□□ -0.07
PRKCH-221ENST00000556245 SBNO1A3KN83 1393 aa14.6□□□□□ -0.07
PRKCH-221ENST00000556245 ANTXR1Q9H6X2 564 aa14.6□□□□□ -0.07
PRKCH-221ENST00000556245 INTS3Q68E01 1043 aaKnown RBP14.59□□□□□ -0.07
PRKCH-221ENST00000556245 MCM10Q7L590 875 aa14.59□□□□□ -0.07
PRKCH-221ENST00000556245 MAP3K19Q56UN5 1328 aa14.59□□□□□ -0.07
PRKCH-221ENST00000556245 FMN2Q9NZ56 1722 aa14.59□□□□□ -0.07
PRKCH-221ENST00000556245 FER1L4A9Z1Z3 1794 aa14.59□□□□□ -0.07
PRKCH-221ENST00000556245 SOX12O15370 315 aa14.59□□□□□ -0.07
PRKCH-221ENST00000556245 SIRT2Q8IXJ6 389 aa14.58□□□□□ -0.07
PRKCH-221ENST00000556245 PTPRCP08575 1304 aa14.58□□□□□ -0.08
PRKCH-221ENST00000556245 RIMS1Q86UR5 1692 aaKnown RBP14.58□□□□□ -0.08
PRKCH-221ENST00000556245 RBM25P49756 843 aaKnown RBP14.57□□□□□ -0.08
PRKCH-221ENST00000556245 RTF1Q92541 710 aaKnown RBP14.57□□□□□ -0.08
PRKCH-221ENST00000556245 ANKARQ7Z5J8 1434 aa14.57□□□□□ -0.08
PRKCH-221ENST00000556245 AMPHP49418 695 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms