RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 MLH3Q9UHC1 1453 aa18.34■□□□□ 0.53
NEK9-209ENST00000556170 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.53
NEK9-209ENST00000556170 EIF4A2Q14240 407 aaKnown RBP18.33■□□□□ 0.53
NEK9-209ENST00000556170 EFCAB6Q5THR3 1501 aa18.33■□□□□ 0.53
NEK9-209ENST00000556170 ZMYM3Q14202 1370 aa18.33■□□□□ 0.52
NEK9-209ENST00000556170 L1TD1Q5T7N2 865 aaKnown RBP18.32■□□□□ 0.52
NEK9-209ENST00000556170 CDC45O75419 566 aa18.32■□□□□ 0.52
NEK9-209ENST00000556170 TTC21BQ7Z4L5 1316 aa18.32■□□□□ 0.52
NEK9-209ENST00000556170 ZBTB40Q9NUA8 1239 aa18.32■□□□□ 0.52
NEK9-209ENST00000556170 EXOC6BQ9Y2D4 811 aa18.32■□□□□ 0.52
NEK9-209ENST00000556170 IL16Q14005 1332 aa18.32■□□□□ 0.52
NEK9-209ENST00000556170 TBC1D32Q96NH3 1257 aa18.32■□□□□ 0.52
NEK9-209ENST00000556170 ZNF330Q9Y3S2 320 aaPredicted RBP18.32■□□□□ 0.52
NEK9-209ENST00000556170 UBE2Q2Q8WVN8 375 aa18.31■□□□□ 0.52
NEK9-209ENST00000556170 SPHKAPQ2M3C7 1700 aa18.31■□□□□ 0.52
NEK9-209ENST00000556170 PLEKHF1Q96S99 279 aa18.31■□□□□ 0.52
NEK9-209ENST00000556170 POLR1AO95602 1720 aaPredicted RBP18.31■□□□□ 0.52
NEK9-209ENST00000556170 MCCP23508 829 aa18.31■□□□□ 0.52
NEK9-209ENST00000556170 GAS2L2Q8NHY3 880 aa18.31■□□□□ 0.52
NEK9-209ENST00000556170 SHROOM2Q13796 1616 aa18.3■□□□□ 0.52
NEK9-209ENST00000556170 ANO2Q9NQ90 1003 aa18.3■□□□□ 0.52
NEK9-209ENST00000556170 MAP3K4Q9Y6R4 1608 aa18.3■□□□□ 0.52
NEK9-209ENST00000556170 TNRQ92752 1358 aa18.3■□□□□ 0.52
NEK9-209ENST00000556170 MRPL50Q8N5N7 158 aaKnown RBP18.3■□□□□ 0.52
NEK9-209ENST00000556170 TAOK2Q9UL54 1235 aa18.3■□□□□ 0.52
NEK9-209ENST00000556170 PPP6R1Q9UPN7 881 aa18.3■□□□□ 0.52
NEK9-209ENST00000556170 IL13P35225 146 aa18.29■□□□□ 0.52
NEK9-209ENST00000556170 HDAC1Q13547 482 aaPredicted RBP18.29■□□□□ 0.52
NEK9-209ENST00000556170 CCDC9Q9Y3X0 531 aaKnown RBP18.29■□□□□ 0.52
NEK9-209ENST00000556170 RNF17Q9BXT8 1623 aaKnown RBP18.29■□□□□ 0.52
NEK9-209ENST00000556170 AIMP1Q12904 312 aaKnown RBP18.29■□□□□ 0.52
NEK9-209ENST00000556170 HDGFL1Q5TGJ6 251 aa18.29■□□□□ 0.52
NEK9-209ENST00000556170 C16orf71Q8IYS4 520 aaPredicted RBP18.29■□□□□ 0.52
NEK9-209ENST00000556170 KIF1BO60333 1816 aa18.29■□□□□ 0.52
NEK9-209ENST00000556170 C1orf141Q5JVX7 400 aa18.28■□□□□ 0.52
NEK9-209ENST00000556170 ST18O60284 1047 aa18.28■□□□□ 0.52
NEK9-209ENST00000556170 KIAA1211Q6ZU35 1233 aa18.28■□□□□ 0.52
NEK9-209ENST00000556170 NEO1Q92859 1461 aa18.27■□□□□ 0.52
NEK9-209ENST00000556170 TSHZ3Q63HK5 1081 aa18.27■□□□□ 0.52
NEK9-209ENST00000556170 INTS3Q68E01 1043 aaKnown RBP18.27■□□□□ 0.52
NEK9-209ENST00000556170 DDX49Q9Y6V7 483 aaKnown RBP18.27■□□□□ 0.51
NEK9-209ENST00000556170 ABCC3O15438 1527 aa18.27■□□□□ 0.51
NEK9-209ENST00000556170 CCDC30Q5VVM6 783 aa18.26■□□□□ 0.51
NEK9-209ENST00000556170 MEIS3Q99687 375 aa18.26■□□□□ 0.51
NEK9-209ENST00000556170 IL1RAPL2Q9NP60 686 aa18.26■□□□□ 0.51
NEK9-209ENST00000556170 METP08581 1390 aa18.26■□□□□ 0.51
NEK9-209ENST00000556170 UBTFL1P0CB47 393 aaPredicted RBP18.26■□□□□ 0.51
NEK9-209ENST00000556170 C9orf78Q9NZ63 289 aaPredicted RBP18.26■□□□□ 0.51
NEK9-209ENST00000556170 TRAK2O60296 914 aa18.26■□□□□ 0.51
NEK9-209ENST00000556170 SURF6O75683 361 aaKnown RBP18.26■□□□□ 0.51
NEK9-209ENST00000556170 NUCB1Q02818 461 aa18.26■□□□□ 0.51
NEK9-209ENST00000556170 ARAP3Q8WWN8 1544 aa18.26■□□□□ 0.51
NEK9-209ENST00000556170 ABCA6Q8N139 1617 aa18.25■□□□□ 0.51
NEK9-209ENST00000556170 LTKP29376 864 aa18.25■□□□□ 0.51
NEK9-209ENST00000556170 PLCB2Q00722 1185 aa18.25■□□□□ 0.51
NEK9-209ENST00000556170 RBM42Q9BTD8 480 aaKnown RBP18.25■□□□□ 0.51
NEK9-209ENST00000556170 SMC5Q8IY18 1101 aa18.24■□□□□ 0.51
NEK9-209ENST00000556170 REC8O95072 547 aa18.24■□□□□ 0.51
NEK9-209ENST00000556170 MAP4K4O95819 1239 aaPredicted RBP18.24■□□□□ 0.51
NEK9-209ENST00000556170 GNAI2P04899 355 aa18.24■□□□□ 0.51
NEK9-209ENST00000556170 TBC1D9Q6ZT07 1266 aa18.24■□□□□ 0.51
NEK9-209ENST00000556170 CHMP3Q9Y3E7 222 aa18.23■□□□□ 0.51
NEK9-209ENST00000556170 DDX11L8A8MPP1 907 aa18.23■□□□□ 0.51
NEK9-209ENST00000556170 ZBTB7BO15156 539 aaPredicted RBP18.23■□□□□ 0.51
NEK9-209ENST00000556170 NLRP2Q9NX02 1062 aa18.23■□□□□ 0.51
NEK9-209ENST00000556170 MTHFSDQ2M296 383 aaKnown RBP18.23■□□□□ 0.51
NEK9-209ENST00000556170 ANXA1P04083 346 aa18.23■□□□□ 0.51
NEK9-209ENST00000556170 MCM4P33991 863 aa18.22■□□□□ 0.51
NEK9-209ENST00000556170 GNAT3A8MTJ3 354 aa18.22■□□□□ 0.51
NEK9-209ENST00000556170 ZNF530Q6P9A1 599 aaPredicted RBP18.22■□□□□ 0.51
NEK9-209ENST00000556170 MAP3K19Q56UN5 1328 aa18.21■□□□□ 0.51
NEK9-209ENST00000556170 ABCA9Q8IUA7 1624 aa18.21■□□□□ 0.51
NEK9-209ENST00000556170 HECW2Q9P2P5 1572 aa18.21■□□□□ 0.51
NEK9-209ENST00000556170 ZC3H6P61129 1189 aaKnown RBP18.21■□□□□ 0.51
NEK9-209ENST00000556170 RPAP2Q8IXW5 612 aaPredicted RBP18.21■□□□□ 0.51
NEK9-209ENST00000556170 GNAI3P08754 354 aa18.21■□□□□ 0.51
NEK9-209ENST00000556170 NEK4P51957 841 aa18.21■□□□□ 0.51
NEK9-209ENST00000556170 NAP1L2Q9ULW6 460 aaPredicted RBP18.21■□□□□ 0.51
NEK9-209ENST00000556170 CEP152O94986 1710 aa18.2■□□□□ 0.5
NEK9-209ENST00000556170 PPRC1Q5VV67 1664 aaKnown RBP18.2■□□□□ 0.5
NEK9-209ENST00000556170 FGD1P98174 961 aa18.19■□□□□ 0.5
NEK9-209ENST00000556170 MCTP1Q6DN14 999 aa18.19■□□□□ 0.5
NEK9-209ENST00000556170 CCT4P50991 539 aaKnown RBP18.19■□□□□ 0.5
NEK9-209ENST00000556170 BMP2KLQ5H9B9 411 aa18.19■□□□□ 0.5
NEK9-209ENST00000556170 EYA1Q99502 592 aa18.19■□□□□ 0.5
NEK9-209ENST00000556170 KCNA6P17658 529 aa18.19■□□□□ 0.5
NEK9-209ENST00000556170 G2E3Q7L622 706 aa18.19■□□□□ 0.5
NEK9-209ENST00000556170 MPRIPQ6WCQ1 1025 aa18.18■□□□□ 0.5
NEK9-209ENST00000556170 ANKLE2Q86XL3 938 aa18.18■□□□□ 0.5
NEK9-209ENST00000556170 OTUD7AQ8TE49 926 aaPredicted RBP18.18■□□□□ 0.5
NEK9-209ENST00000556170 ARHGAP45Q92619 1136 aa18.18■□□□□ 0.5
NEK9-209ENST00000556170 PHF23Q9BUL5 403 aaPredicted RBP18.18■□□□□ 0.5
NEK9-209ENST00000556170 PROSER2Q86WR7 435 aaPredicted RBP18.18■□□□□ 0.5
NEK9-209ENST00000556170 PHF8Q9UPP1 1060 aa18.17■□□□□ 0.5
NEK9-209ENST00000556170 PTMAP06454 111 aaKnown RBP18.17■□□□□ 0.5
NEK9-209ENST00000556170 INO80Q9ULG1 1556 aaPredicted RBP18.17■□□□□ 0.5
NEK9-209ENST00000556170 K7ELQ4 463 aaPredicted RBP18.17■□□□□ 0.5
NEK9-209ENST00000556170 FLIIQ13045 1269 aa18.17■□□□□ 0.5
NEK9-209ENST00000556170 NUTM1Q86Y26 1132 aa18.16■□□□□ 0.5
NEK9-209ENST00000556170 LRRCC1Q9C099 1032 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms