RNA–Protein interactions for RNA: ENST00000555578.1

LINC00638-201, long intergenic non-protein coding RNA 638, humanhuman

BASIC

Gene LINC00638, Length 2,518 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00638-201ENST00000555578 FOXO3O43524 673 aa18.15■□□□□ 0.5
LINC00638-201ENST00000555578 ADGRL3Q9HAR2 1447 aa18.14■□□□□ 0.5
LINC00638-201ENST00000555578 PSME1Q06323 249 aa18.13■□□□□ 0.49
LINC00638-201ENST00000555578 SULT6B1Q6IMI4 303 aa18.13■□□□□ 0.49
LINC00638-201ENST00000555578 LAS1LQ9Y4W2 734 aaKnown RBP18.13■□□□□ 0.49
LINC00638-201ENST00000555578 USP31Q70CQ4 1352 aa18.13■□□□□ 0.49
LINC00638-201ENST00000555578 NEFMP07197 916 aa18.12■□□□□ 0.49
LINC00638-201ENST00000555578 PNNQ9H307 717 aaKnown RBP18.12■□□□□ 0.49
LINC00638-201ENST00000555578 PIK3C2AO00443 1686 aa18.12■□□□□ 0.49
LINC00638-201ENST00000555578 PEAK1Q9H792 1746 aa18.12■□□□□ 0.49
LINC00638-201ENST00000555578 AMPHP49418 695 aa18.11■□□□□ 0.49
LINC00638-201ENST00000555578 FRAT1Q92837 279 aaPredicted RBP18.11■□□□□ 0.49
LINC00638-201ENST00000555578 FAM83GA6ND36 823 aa18.1■□□□□ 0.49
LINC00638-201ENST00000555578 DCTN1Q14203 1278 aa18.1■□□□□ 0.49
LINC00638-201ENST00000555578 LMOD2Q6P5Q4 547 aa18.1■□□□□ 0.49
LINC00638-201ENST00000555578 MYH16Q9H6N6 1097 aa18.1■□□□□ 0.49
LINC00638-201ENST00000555578 ZBTB7CA1YPR0 619 aa18.09■□□□□ 0.49
LINC00638-201ENST00000555578 EXOSC9Q06265 439 aaKnown RBP18.09■□□□□ 0.49
LINC00638-201ENST00000555578 NFE2L2Q16236 605 aa18.09■□□□□ 0.49
LINC00638-201ENST00000555578 RARSP54136 660 aaKnown RBP18.09■□□□□ 0.49
LINC00638-201ENST00000555578 LTV1Q96GA3 475 aaPredicted RBP18.09■□□□□ 0.49
LINC00638-201ENST00000555578 TNNQ9UQP3 1299 aa18.08■□□□□ 0.49
LINC00638-201ENST00000555578 DDX17Q92841 729 aaKnown RBP18.08■□□□□ 0.48
LINC00638-201ENST00000555578 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.07■□□□□ 0.48
LINC00638-201ENST00000555578 CANXP27824 592 aaKnown RBP18.07■□□□□ 0.48
LINC00638-201ENST00000555578 PANK1Q8TE04 598 aa18.06■□□□□ 0.48
LINC00638-201ENST00000555578 C19orf44Q9H6X5 657 aa18.06■□□□□ 0.48
LINC00638-201ENST00000555578 TMEM94Q12767 1356 aa18.05■□□□□ 0.48
LINC00638-201ENST00000555578 NCBP3Q53F19 620 aaKnown RBP18.05■□□□□ 0.48
LINC00638-201ENST00000555578 SKAP1Q86WV1 359 aa18.04■□□□□ 0.48
LINC00638-201ENST00000555578 FLT4P35916 1363 aa18.04■□□□□ 0.48
LINC00638-201ENST00000555578 CLUAP1Q96AJ1 413 aa18.04■□□□□ 0.48
LINC00638-201ENST00000555578 EYA1Q99502 592 aa18.04■□□□□ 0.48
LINC00638-201ENST00000555578 SBNO1A3KN83 1393 aa18.04■□□□□ 0.48
LINC00638-201ENST00000555578 STRCP1A6NGW2 1772 aa18.03■□□□□ 0.48
LINC00638-201ENST00000555578 HOXC9P31274 260 aa18.03■□□□□ 0.48
LINC00638-201ENST00000555578 NWD1Q149M9 1564 aa18.03■□□□□ 0.48
LINC00638-201ENST00000555578 ELL2O00472 640 aaPredicted RBP18.02■□□□□ 0.48
LINC00638-201ENST00000555578 COG6Q9Y2V7 657 aa18.02■□□□□ 0.48
LINC00638-201ENST00000555578 MARF1Q9Y4F3 1742 aaKnown RBP18.02■□□□□ 0.48
LINC00638-201ENST00000555578 ATF3P18847 181 aa18.02■□□□□ 0.47
LINC00638-201ENST00000555578 DLG5Q8TDM6 1919 aa18.01■□□□□ 0.47
LINC00638-201ENST00000555578 RLBP1P12271 317 aa18.01■□□□□ 0.47
LINC00638-201ENST00000555578 MCM10Q7L590 875 aa18.01■□□□□ 0.47
LINC00638-201ENST00000555578 USHBP1Q8N6Y0 703 aa18.01■□□□□ 0.47
LINC00638-201ENST00000555578 KRT28Q7Z3Y7 464 aa18■□□□□ 0.47
LINC00638-201ENST00000555578 IL16Q14005 1332 aa17.99■□□□□ 0.47
LINC00638-201ENST00000555578 C1orf167Q5SNV9 1468 aa17.99■□□□□ 0.47
LINC00638-201ENST00000555578 SSH1Q8WYL5 1049 aa17.99■□□□□ 0.47
LINC00638-201ENST00000555578 TCERG1O14776 1098 aaKnown RBP17.99■□□□□ 0.47
LINC00638-201ENST00000555578 DEKP35659 375 aaKnown RBP17.99■□□□□ 0.47
LINC00638-201ENST00000555578 ERICH6Q7L0X2 663 aa17.99■□□□□ 0.47
LINC00638-201ENST00000555578 SMC4Q9NTJ3 1288 aa17.99■□□□□ 0.47
LINC00638-201ENST00000555578 TSPYL6Q8N831 410 aa17.98■□□□□ 0.47
LINC00638-201ENST00000555578 ANO8Q9HCE9 1232 aaPredicted RBP17.98■□□□□ 0.47
LINC00638-201ENST00000555578 LMTK3Q96Q04 1460 aa17.98■□□□□ 0.47
LINC00638-201ENST00000555578 MBIPQ9NS73 344 aa17.98■□□□□ 0.47
LINC00638-201ENST00000555578 MTHFSDQ2M296 383 aaKnown RBP17.97■□□□□ 0.47
LINC00638-201ENST00000555578 ZNF335Q9H4Z2 1342 aaPredicted RBP17.96■□□□□ 0.47
LINC00638-201ENST00000555578 GCP02774 474 aa17.96■□□□□ 0.47
LINC00638-201ENST00000555578 MIS18AQ9NYP9 233 aa17.95■□□□□ 0.46
LINC00638-201ENST00000555578 IGSF1Q8N6C5 1336 aa17.95■□□□□ 0.46
LINC00638-201ENST00000555578 RGPD1P0DJD0 1748 aa17.95■□□□□ 0.46
LINC00638-201ENST00000555578 PDE3AQ14432 1141 aa17.95■□□□□ 0.46
LINC00638-201ENST00000555578 KRT24Q2M2I5 525 aa17.94■□□□□ 0.46
LINC00638-201ENST00000555578 GNAI1P63096 354 aa17.94■□□□□ 0.46
LINC00638-201ENST00000555578 LRRC59Q96AG4 307 aaKnown RBP17.94■□□□□ 0.46
LINC00638-201ENST00000555578 ARHGEF10O15013 1369 aa17.93■□□□□ 0.46
LINC00638-201ENST00000555578 MST1RQ04912 1400 aa17.93■□□□□ 0.46
LINC00638-201ENST00000555578 ZNF853P0CG23 659 aa17.93■□□□□ 0.46
LINC00638-201ENST00000555578 C8orf58Q8NAV2 365 aa17.93■□□□□ 0.46
LINC00638-201ENST00000555578 IFT57Q9NWB7 429 aa17.93■□□□□ 0.46
LINC00638-201ENST00000555578 NOB1Q9ULX3 412 aaKnown RBP17.93■□□□□ 0.46
LINC00638-201ENST00000555578 ZC3H6P61129 1189 aaKnown RBP17.93■□□□□ 0.46
LINC00638-201ENST00000555578 LMOD3Q0VAK6 560 aa17.93■□□□□ 0.46
LINC00638-201ENST00000555578 IP6K1Q92551 441 aa17.93■□□□□ 0.46
LINC00638-201ENST00000555578 CFAP44Q96MT7 982 aa17.93■□□□□ 0.46
LINC00638-201ENST00000555578 LTN1O94822 1766 aa17.93■□□□□ 0.46
LINC00638-201ENST00000555578 STRCQ7RTU9 1775 aa17.92■□□□□ 0.46
LINC00638-201ENST00000555578 NBPF6Q5VWK0 638 aa17.92■□□□□ 0.46
LINC00638-201ENST00000555578 CABLES1Q8TDN4 633 aa17.92■□□□□ 0.46
LINC00638-201ENST00000555578 NBPF4Q96M43 638 aa17.92■□□□□ 0.46
LINC00638-201ENST00000555578 CALD1Q05682 793 aaKnown RBP17.91■□□□□ 0.46
LINC00638-201ENST00000555578 KCNH5Q8NCM2 988 aa17.91■□□□□ 0.46
LINC00638-201ENST00000555578 VAMP4O75379 141 aa17.91■□□□□ 0.46
LINC00638-201ENST00000555578 TRIM27P14373 513 aa17.91■□□□□ 0.46
LINC00638-201ENST00000555578 ZKSCAN2Q63HK3 967 aa17.91■□□□□ 0.46
LINC00638-201ENST00000555578 CADPS2Q86UW7 1296 aa17.91■□□□□ 0.46
LINC00638-201ENST00000555578 KDRP35968 1356 aa17.91■□□□□ 0.46
LINC00638-201ENST00000555578 NFAT5O94916 1531 aa17.9■□□□□ 0.46
LINC00638-201ENST00000555578 AXIN2Q9Y2T1 843 aa17.9■□□□□ 0.46
LINC00638-201ENST00000555578 CT47B1P0C2W7 299 aaPredicted RBP17.9■□□□□ 0.46
LINC00638-201ENST00000555578 FTSJ3Q8IY81 847 aaKnown RBP17.89■□□□□ 0.45
LINC00638-201ENST00000555578 MSH6P52701 1360 aa17.89■□□□□ 0.45
LINC00638-201ENST00000555578 TWISTNBQ3B726 338 aaPredicted RBP17.89■□□□□ 0.45
LINC00638-201ENST00000555578 ARHGEF25Q86VW2 580 aa17.89■□□□□ 0.45
LINC00638-201ENST00000555578 IGHDP01880 384 aa17.88■□□□□ 0.45
LINC00638-201ENST00000555578 KDM2BQ8NHM5 1336 aa17.88■□□□□ 0.45
LINC00638-201ENST00000555578 DZIP1LQ8IYY4 767 aaKnown RBP17.88■□□□□ 0.45
LINC00638-201ENST00000555578 RTF1Q92541 710 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms