RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 PIK3C2AO00443 1686 aa30.41■■■□□ 2.46
STRN3-207ENST00000555358 DAXXQ9UER7 740 aaPredicted RBP30.4■■■□□ 2.46
STRN3-207ENST00000555358 PHF8Q9UPP1 1060 aa30.4■■■□□ 2.46
STRN3-207ENST00000555358 STRCP1A6NGW2 1772 aa30.4■■■□□ 2.46
STRN3-207ENST00000555358 SOX12O15370 315 aa30.38■■■□□ 2.45
STRN3-207ENST00000555358 CLUAP1Q96AJ1 413 aa30.37■■■□□ 2.45
STRN3-207ENST00000555358 LMTK3Q96Q04 1460 aa30.37■■■□□ 2.45
STRN3-207ENST00000555358 USP31Q70CQ4 1352 aa30.37■■■□□ 2.45
STRN3-207ENST00000555358 IL13P35225 146 aa30.36■■■□□ 2.45
STRN3-207ENST00000555358 ESCO1Q5FWF5 840 aa30.36■■■□□ 2.45
STRN3-207ENST00000555358 PANK1Q8TE04 598 aa30.35■■■□□ 2.45
STRN3-207ENST00000555358 PHF23Q9BUL5 403 aaPredicted RBP30.35■■■□□ 2.45
STRN3-207ENST00000555358 COG6Q9Y2V7 657 aa30.34■■■□□ 2.45
STRN3-207ENST00000555358 LRRC7Q96NW7 1537 aa30.34■■■□□ 2.45
STRN3-207ENST00000555358 NUTM2GQ5VZR2 741 aa30.33■■■□□ 2.45
STRN3-207ENST00000555358 PEAK1Q9H792 1746 aa30.33■■■□□ 2.45
STRN3-207ENST00000555358 IL27Q8NEV9 243 aa30.32■■■□□ 2.45
STRN3-207ENST00000555358 USP19O94966 1318 aa30.32■■■□□ 2.44
STRN3-207ENST00000555358 HMOX1P09601 288 aa30.31■■■□□ 2.44
STRN3-207ENST00000555358 MARF1Q9Y4F3 1742 aaKnown RBP30.31■■■□□ 2.44
STRN3-207ENST00000555358 CANXP27824 592 aaKnown RBP30.31■■■□□ 2.44
STRN3-207ENST00000555358 GSE1Q14687 1217 aa30.31■■■□□ 2.44
STRN3-207ENST00000555358 ORAI2Q96SN7 254 aa30.31■■■□□ 2.44
STRN3-207ENST00000555358 RSPH6AQ9H0K4 717 aa30.31■■■□□ 2.44
STRN3-207ENST00000555358 MAPK8IP3Q9UPT6 1336 aa30.31■■■□□ 2.44
STRN3-207ENST00000555358 RARSP54136 660 aaKnown RBP30.3■■■□□ 2.44
STRN3-207ENST00000555358 NLRP6P59044 892 aa30.3■■■□□ 2.44
STRN3-207ENST00000555358 FCHSD2O94868 740 aa30.3■■■□□ 2.44
STRN3-207ENST00000555358 CCDC27Q2M243 656 aa30.3■■■□□ 2.44
STRN3-207ENST00000555358 STRCQ7RTU9 1775 aa30.29■■■□□ 2.44
STRN3-207ENST00000555358 TMPOP42166 694 aaKnown RBP30.29■■■□□ 2.44
STRN3-207ENST00000555358 PRKAR2BP31323 418 aa30.28■■■□□ 2.44
STRN3-207ENST00000555358 ABTB2Q8N961 1025 aa30.28■■■□□ 2.44
STRN3-207ENST00000555358 TMEM94Q12767 1356 aa30.27■■■□□ 2.44
STRN3-207ENST00000555358 C19orf44Q9H6X5 657 aa30.27■■■□□ 2.44
STRN3-207ENST00000555358 WDR63Q8IWG1 891 aa30.26■■■□□ 2.43
STRN3-207ENST00000555358 MAP3K19Q56UN5 1328 aa30.26■■■□□ 2.43
STRN3-207ENST00000555358 HSP90AB2PQ58FF8 381 aa30.26■■■□□ 2.43
STRN3-207ENST00000555358 FRAT1Q92837 279 aaPredicted RBP30.25■■■□□ 2.43
STRN3-207ENST00000555358 EIF4A2Q14240 407 aaKnown RBP30.24■■■□□ 2.43
STRN3-207ENST00000555358 PNNQ9H307 717 aaKnown RBP30.24■■■□□ 2.43
STRN3-207ENST00000555358 PSME1Q06323 249 aa30.24■■■□□ 2.43
STRN3-207ENST00000555358 NCBP3Q53F19 620 aaKnown RBP30.23■■■□□ 2.43
STRN3-207ENST00000555358 TRIM35Q9UPQ4 493 aa30.23■■■□□ 2.43
STRN3-207ENST00000555358 USP54Q70EL1 1684 aa30.23■■■□□ 2.43
STRN3-207ENST00000555358 AAMPQ13685 434 aa30.23■■■□□ 2.43
STRN3-207ENST00000555358 PHACTR3Q96KR7 559 aa30.22■■■□□ 2.43
STRN3-207ENST00000555358 FOXO3O43524 673 aa30.22■■■□□ 2.43
STRN3-207ENST00000555358 SEC24BO95487 1268 aa30.21■■■□□ 2.43
STRN3-207ENST00000555358 RLBP1P12271 317 aa30.21■■■□□ 2.43
STRN3-207ENST00000555358 XPCQ01831 940 aaPredicted RBP30.21■■■□□ 2.43
STRN3-207ENST00000555358 RIPK4P57078 832 aa30.2■■■□□ 2.43
STRN3-207ENST00000555358 C1orf167Q5SNV9 1468 aa30.2■■■□□ 2.43
STRN3-207ENST00000555358 TNNQ9UQP3 1299 aa30.19■■■□□ 2.42
STRN3-207ENST00000555358 PCDHB15Q9Y5E8 787 aa30.19■■■□□ 2.42
STRN3-207ENST00000555358 FRAT2O75474 233 aaPredicted RBP30.18■■■□□ 2.42
STRN3-207ENST00000555358 SBNO1A3KN83 1393 aa30.17■■■□□ 2.42
STRN3-207ENST00000555358 AEBP1Q8IUX7 1158 aa30.16■■■□□ 2.42
STRN3-207ENST00000555358 FLT4P35916 1363 aa30.15■■■□□ 2.42
STRN3-207ENST00000555358 ATF3P18847 181 aa30.15■■■□□ 2.42
STRN3-207ENST00000555358 AMPHP49418 695 aa30.15■■■□□ 2.42
STRN3-207ENST00000555358 RGPD1P0DJD0 1748 aa30.14■■■□□ 2.42
STRN3-207ENST00000555358 XIRP1Q702N8 1843 aaKnown RBP30.14■■■□□ 2.42
STRN3-207ENST00000555358 MST1RQ04912 1400 aa30.14■■■□□ 2.42
STRN3-207ENST00000555358 SULT6B1Q6IMI4 303 aa30.13■■■□□ 2.41
STRN3-207ENST00000555358 BCL2L13Q9BXK5 485 aa30.12■■■□□ 2.41
STRN3-207ENST00000555358 NCOA3Q9Y6Q9 1424 aa30.12■■■□□ 2.41
STRN3-207ENST00000555358 NFE2L2Q16236 605 aa30.11■■■□□ 2.41
STRN3-207ENST00000555358 KIF1AQ12756 1690 aa30.11■■■□□ 2.41
STRN3-207ENST00000555358 DLG5Q8TDM6 1919 aa30.11■■■□□ 2.41
STRN3-207ENST00000555358 DCCP43146 1447 aa30.1■■■□□ 2.41
STRN3-207ENST00000555358 MYH16Q9H6N6 1097 aa30.1■■■□□ 2.41
STRN3-207ENST00000555358 LTN1O94822 1766 aa30.09■■■□□ 2.41
STRN3-207ENST00000555358 TRPM3Q9HCF6 1732 aaPredicted RBP30.09■■■□□ 2.41
STRN3-207ENST00000555358 TSR2Q969E8 191 aaKnown RBP30.08■■■□□ 2.41
STRN3-207ENST00000555358 PDZRN3Q9UPQ7 1066 aa30.08■■■□□ 2.41
STRN3-207ENST00000555358 ZNF335Q9H4Z2 1342 aaPredicted RBP30.08■■■□□ 2.41
STRN3-207ENST00000555358 KRT28Q7Z3Y7 464 aa30.08■■■□□ 2.41
STRN3-207ENST00000555358 BRPF3Q9ULD4 1205 aa30.08■■■□□ 2.41
STRN3-207ENST00000555358 HOXC9P31274 260 aa30.07■■■□□ 2.4
STRN3-207ENST00000555358 RTN4Q9NQC3 1192 aaKnown RBP30.07■■■□□ 2.4
STRN3-207ENST00000555358 NFAT5O94916 1531 aa30.06■■■□□ 2.4
STRN3-207ENST00000555358 PLEKHG5O94827 1062 aa30.06■■■□□ 2.4
STRN3-207ENST00000555358 LMOD2Q6P5Q4 547 aa30.06■■■□□ 2.4
STRN3-207ENST00000555358 DDX17Q92841 729 aaKnown RBP30.06■■■□□ 2.4
STRN3-207ENST00000555358 BECN1Q14457 450 aa30.04■■■□□ 2.4
STRN3-207ENST00000555358 MSH6P52701 1360 aa30.04■■■□□ 2.4
STRN3-207ENST00000555358 MVPQ14764 893 aaKnown RBP30.04■■■□□ 2.4
STRN3-207ENST00000555358 CADPS2Q86UW7 1296 aa30.04■■■□□ 2.4
STRN3-207ENST00000555358 THUMPD2Q9BTF0 503 aaKnown RBP30.04■■■□□ 2.4
STRN3-207ENST00000555358 RWDD1Q9H446 243 aaPredicted RBP30.04■■■□□ 2.4
STRN3-207ENST00000555358 IL16Q14005 1332 aa30.03■■■□□ 2.4
STRN3-207ENST00000555358 ARHGEF10O15013 1369 aa30.02■■■□□ 2.4
STRN3-207ENST00000555358 KIF24Q5T7B8 1368 aa30.02■■■□□ 2.4
STRN3-207ENST00000555358 EYA1Q99502 592 aa30.02■■■□□ 2.4
STRN3-207ENST00000555358 TBC1D32Q96NH3 1257 aa30.01■■■□□ 2.39
STRN3-207ENST00000555358 CT47B1P0C2W7 299 aaPredicted RBP30■■■□□ 2.39
STRN3-207ENST00000555358 ZKSCAN2Q63HK3 967 aa30■■■□□ 2.39
STRN3-207ENST00000555358 LTV1Q96GA3 475 aaPredicted RBP29.99■■■□□ 2.39
STRN3-207ENST00000555358 ZBTB7CA1YPR0 619 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms