RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 VSIG10Q8N0Z9 540 aa4.72□□□□□ -1.65
KTN1-217ENST00000554831 RNF214Q8ND24 703 aa4.72□□□□□ -1.65
KTN1-217ENST00000554831 CHMP4CQ96CF2 233 aa4.72□□□□□ -1.65
KTN1-217ENST00000554831 FAM184AQ8NB25 1140 aa4.72□□□□□ -1.65
KTN1-217ENST00000554831 BAG4O95429 457 aaKnown RBP4.72□□□□□ -1.65
KTN1-217ENST00000554831 TPM2P07951 284 aa4.72□□□□□ -1.65
KTN1-217ENST00000554831 RRS1Q15050 365 aaKnown RBP4.72□□□□□ -1.65
KTN1-217ENST00000554831 RNF20Q5VTR2 975 aa4.72□□□□□ -1.65
KTN1-217ENST00000554831 DRC7Q8IY82 874 aa4.72□□□□□ -1.65
KTN1-217ENST00000554831 LRRCC1Q9C099 1032 aa4.72□□□□□ -1.65
KTN1-217ENST00000554831 WASLO00401 505 aaPredicted RBP4.72□□□□□ -1.65
KTN1-217ENST00000554831 EIF2S2P20042 333 aaKnown RBP4.72□□□□□ -1.65
KTN1-217ENST00000554831 HDGFL1Q5TGJ6 251 aa4.72□□□□□ -1.65
KTN1-217ENST00000554831 ANKRD44Q8N8A2 993 aa4.72□□□□□ -1.65
KTN1-217ENST00000554831 PHF23Q9BUL5 403 aaPredicted RBP4.72□□□□□ -1.65
KTN1-217ENST00000554831 DCTPP1Q9H773 170 aa4.72□□□□□ -1.65
KTN1-217ENST00000554831 WDR33Q9C0J8 1336 aaKnown RBP4.72□□□□□ -1.65
KTN1-217ENST00000554831 RRP9O43818 475 aaKnown RBP4.71□□□□□ -1.65
KTN1-217ENST00000554831 PDIA4P13667 645 aaKnown RBP4.71□□□□□ -1.65
KTN1-217ENST00000554831 HMGN5P82970 282 aaKnown RBP4.71□□□□□ -1.65
KTN1-217ENST00000554831 PPP6R1Q9UPN7 881 aa4.71□□□□□ -1.65
KTN1-217ENST00000554831 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.71□□□□□ -1.65
KTN1-217ENST00000554831 NEXNQ0ZGT2 675 aa4.71□□□□□ -1.65
KTN1-217ENST00000554831 DCTN1Q14203 1278 aa4.71□□□□□ -1.65
KTN1-217ENST00000554831 NME9Q86XW9 330 aa4.71□□□□□ -1.65
KTN1-217ENST00000554831 EXOC6BQ9Y2D4 811 aa4.71□□□□□ -1.65
KTN1-217ENST00000554831 IFIT2P09913 472 aaKnown RBP4.71□□□□□ -1.66
KTN1-217ENST00000554831 NECTIN2Q92692 538 aa4.71□□□□□ -1.66
KTN1-217ENST00000554831 FAM13BQ9NYF5 915 aa4.71□□□□□ -1.66
KTN1-217ENST00000554831 EIF4G3O43432 1585 aaKnown RBP4.71□□□□□ -1.66
KTN1-217ENST00000554831 ZBTB7BO15156 539 aaPredicted RBP4.71□□□□□ -1.66
KTN1-217ENST00000554831 DDX58O95786 925 aaKnown RBP4.71□□□□□ -1.66
KTN1-217ENST00000554831 SSFA2P28290 1259 aa4.71□□□□□ -1.66
KTN1-217ENST00000554831 PANK2Q9BZ23 570 aa4.71□□□□□ -1.66
KTN1-217ENST00000554831 MBIPQ9NS73 344 aa4.71□□□□□ -1.66
KTN1-217ENST00000554831 NAP1L2Q9ULW6 460 aaPredicted RBP4.71□□□□□ -1.66
KTN1-217ENST00000554831 UPF3BQ9BZI7 483 aaKnown RBP4.71□□□□□ -1.66
KTN1-217ENST00000554831 TRIM35Q9UPQ4 493 aa4.71□□□□□ -1.66
KTN1-217ENST00000554831 PTPRCP08575 1304 aa4.71□□□□□ -1.66
KTN1-217ENST00000554831 KDM5DQ9BY66 1539 aa4.71□□□□□ -1.66
KTN1-217ENST00000554831 VPS37CA5D8V6 355 aaPredicted RBP4.7□□□□□ -1.66
KTN1-217ENST00000554831 G3BP1Q13283 466 aaKnown RBP eCLIP4.7□□□□□ -1.66
KTN1-217ENST00000554831 FBXO31Q5XUX0 539 aaPredicted RBP4.7□□□□□ -1.66
KTN1-217ENST00000554831 CCDC39Q9UFE4 941 aa4.7□□□□□ -1.66
KTN1-217ENST00000554831 BCORL1Q5H9F3 1711 aa4.7□□□□□ -1.66
KTN1-217ENST00000554831 ABCA8O94911 1581 aa4.7□□□□□ -1.66
KTN1-217ENST00000554831 CNTROBQ8N137 903 aa4.7□□□□□ -1.66
KTN1-217ENST00000554831 PHACTR3Q96KR7 559 aa4.7□□□□□ -1.66
KTN1-217ENST00000554831 ABCC2Q92887 1545 aa4.7□□□□□ -1.66
KTN1-217ENST00000554831 RAB3GAP1Q15042 981 aa4.7□□□□□ -1.66
KTN1-217ENST00000554831 R3HCC1Q9Y3T6 440 aaKnown RBP4.7□□□□□ -1.66
KTN1-217ENST00000554831 ZNF518AQ6AHZ1 1483 aa4.7□□□□□ -1.66
KTN1-217ENST00000554831 FBLN1P23142 703 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 C1orf141Q5JVX7 400 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 TTC22Q5TAA0 569 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 MRPL50Q8N5N7 158 aaKnown RBP4.69□□□□□ -1.66
KTN1-217ENST00000554831 TSPYL6Q8N831 410 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 C8orf58Q8NAV2 365 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 RBM42Q9BTD8 480 aaKnown RBP4.69□□□□□ -1.66
KTN1-217ENST00000554831 ANTXR1Q9H6X2 564 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 BECN2A8MW95 431 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 LETM1O95202 739 aaPredicted RBP4.69□□□□□ -1.66
KTN1-217ENST00000554831 SDSP20132 328 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 MCM10Q7L590 875 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 A0A1W2PP64 1363 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 GOLGA6L19H0YKK7 550 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 SRGAP3O43295 1099 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 MX1P20591 662 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 KIF1BPQ96EK5 621 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 SLC26A8Q96RN1 970 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 PBRM1Q86U86 1689 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 CEP170Q5SW79 1584 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 USP19O94966 1318 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 GLRX3O76003 335 aaKnown RBP4.69□□□□□ -1.66
KTN1-217ENST00000554831 MCM5P33992 734 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 MEIS3Q99687 375 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 IL1RAPL2Q9NP60 686 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 FIBPO43427 364 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 ANAPC15P60006 121 aa4.69□□□□□ -1.66
KTN1-217ENST00000554831 TPM3P06753 285 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 PSMA5P28066 241 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 SF3A1Q15459 793 aaKnown RBP4.68□□□□□ -1.66
KTN1-217ENST00000554831 PLEKHM2Q8IWE5 1019 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 ADGBQ8N7X0 1667 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 FAM83GA6ND36 823 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 PDE1AP54750 535 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 FLIIQ13045 1269 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 ABTB2Q8N961 1025 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 TSPY26PQ9H489 355 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 F6X3S4 739 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 HIP1O00291 1037 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 LRRFIP1Q32MZ4 808 aaKnown RBP4.68□□□□□ -1.66
KTN1-217ENST00000554831 HS1BP3Q53T59 392 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 CPLX2Q6PUV4 134 aaKnown RBP4.68□□□□□ -1.66
KTN1-217ENST00000554831 ERVK-7P63135 1459 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 TTC21BQ7Z4L5 1316 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 H3BQV1 296 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 BRPF1P55201 1214 aaPredicted RBP4.68□□□□□ -1.66
KTN1-217ENST00000554831 KRT85P78386 507 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 GORABQ5T7V8 394 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms