RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 LNPKQ9C0E8 428 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 TSPYL4Q9UJ04 414 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 ABTB2Q8N961 1025 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 CCDC47Q96A33 483 aaKnown RBP3.95□□□□□ -1.78
SYNE2-212ENST00000554584 FNDC3AQ9Y2H6 1198 aaKnown RBP3.95□□□□□ -1.78
SYNE2-212ENST00000554584 DCTN1Q14203 1278 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 EAPPQ56P03 285 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-212ENST00000554584 CEP63Q96MT8 703 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 LIMCH1Q9UPQ0 1083 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 ERICH2A1L162 156 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 KANK1Q14678 1352 aa3.95□□□□□ -1.78
SYNE2-212ENST00000554584 DIAPH1O60610 1272 aaKnown RBP3.94□□□□□ -1.78
SYNE2-212ENST00000554584 SF3A3Q12874 501 aaKnown RBP eCLIP3.94□□□□□ -1.78
SYNE2-212ENST00000554584 AXDND1Q5T1B0 1012 aaPredicted RBP3.94□□□□□ -1.78
SYNE2-212ENST00000554584 NUP155O75694 1391 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 RSF1Q96T23 1441 aaPredicted RBP3.94□□□□□ -1.78
SYNE2-212ENST00000554584 HMMRO75330 724 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 SART3Q15020 963 aaKnown RBP3.94□□□□□ -1.78
SYNE2-212ENST00000554584 RRS1Q15050 365 aaKnown RBP3.94□□□□□ -1.78
SYNE2-212ENST00000554584 TBC1D10BQ4KMP7 808 aaPredicted RBP3.94□□□□□ -1.78
SYNE2-212ENST00000554584 ISM2Q6H9L7 571 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 BRPF3Q9ULD4 1205 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 BAZ2BQ9UIF8 2168 aaKnown RBP3.94□□□□□ -1.78
SYNE2-212ENST00000554584 ANAPC15P60006 121 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 DDX11Q96FC9 970 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 GOLGA6L19H0YKK7 550 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 NEXNQ0ZGT2 675 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 ANO3Q9BYT9 981 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 METTL14Q9HCE5 456 aaKnown RBP3.94□□□□□ -1.78
SYNE2-212ENST00000554584 PAGR1Q9BTK6 254 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 TMEM110-MUSTN1A8MSY1 372 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 TMF1P82094 1093 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 TSTA3Q13630 321 aaPredicted RBP3.94□□□□□ -1.78
SYNE2-212ENST00000554584 AEBP1Q8IUX7 1158 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 SAMSN1Q9NSI8 373 aaKnown RBP3.94□□□□□ -1.78
SYNE2-212ENST00000554584 RAI14Q9P0K7 980 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 SEPT7Q16181 437 aaKnown RBP3.94□□□□□ -1.78
SYNE2-212ENST00000554584 ZBTB3Q9H5J0 574 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 PPFIA1Q13136 1202 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 GRIPAP1Q4V328 841 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 ACRBPQ8NEB7 543 aa3.94□□□□□ -1.78
SYNE2-212ENST00000554584 PICALMQ13492 652 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 PSDA5PKW4 1024 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-212ENST00000554584 G3BP1Q13283 466 aaKnown RBP eCLIP3.93□□□□□ -1.78
SYNE2-212ENST00000554584 IRX5P78411 483 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-212ENST00000554584 ERLEC1Q96DZ1 483 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 FAM212AQ96EL1 285 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 HELBQ8NG08 1087 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-212ENST00000554584 PRDM10Q9NQV6 1147 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 ZNF644Q9H582 1327 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-212ENST00000554584 TAF12Q16514 161 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 MICALL1Q8N3F8 863 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 CHMP4BQ9H444 224 aaKnown RBP3.93□□□□□ -1.78
SYNE2-212ENST00000554584 ZBTB21Q9ULJ3 1066 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 TPM1P09493 284 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 CCDC70Q6NSX1 233 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 MNS1Q8NEH6 495 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 IL1RAPL2Q9NP60 686 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 C6orf229H3BNL8 230 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 RNF187Q5TA31 235 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-212ENST00000554584 FSD1Q9BTV5 496 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 ATP5J2-PTCD1G3V325 749 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 CDCA7LQ96GN5 454 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 H0YHG0 523 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 SYNDIG1Q9H7V2 258 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 VEZTQ9HBM0 779 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 KIF22Q14807 665 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 PLIN2Q99541 437 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 HOMER2Q9NSB8 354 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 MAP10Q9P2G4 905 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 ZBTB12Q9Y330 459 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-212ENST00000554584 COG3Q96JB2 828 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 HGSO14964 777 aaPredicted RBP3.93□□□□□ -1.78
SYNE2-212ENST00000554584 HSP90AA4PQ58FG1 418 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 ZNF652Q9Y2D9 606 aa3.93□□□□□ -1.78
SYNE2-212ENST00000554584 CLASRPQ8N2M8 674 aaKnown RBP3.92□□□□□ -1.78
SYNE2-212ENST00000554584 WRNQ14191 1432 aaPredicted RBP eCLIP3.92□□□□□ -1.78
SYNE2-212ENST00000554584 TSPOAP1O95153 1857 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 CUX2O14529 1486 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 MINDY4BA8MYZ0 360 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 ABCF2Q9UG63 623 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 SFMBT1Q9UHJ3 866 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 TEX35Q5T0J7 233 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 PPM1EQ8WY54 764 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 RIPK4P57078 832 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 TAB3Q8N5C8 712 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-212ENST00000554584 RALYLQ86SE5 291 aaKnown RBP3.92□□□□□ -1.78
SYNE2-212ENST00000554584 CPLX3Q8WVH0 158 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 RAPGEF4Q8WZA2 1011 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 CABP4P57796 275 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 PDE1CQ14123 709 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-212ENST00000554584 ZNF654Q8IZM8 581 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 LRRC43Q8N309 656 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 DDX23Q9BUQ8 820 aaKnown RBP3.92□□□□□ -1.78
SYNE2-212ENST00000554584 SYNDIG1LA6NDD5 238 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 MS4A1P11836 297 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 NOM1Q5C9Z4 860 aaKnown RBP3.92□□□□□ -1.78
SYNE2-212ENST00000554584 WDR48Q8TAF3 677 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 ABCF3Q9NUQ8 709 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 IFT57Q9NWB7 429 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms