RNA–Protein interactions for RNA: ENST00000553691.5

VIPAS39-205, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-205ENST00000553691 NOS1P29475 1434 aa9.9□□□□□ -0.82
VIPAS39-205ENST00000553691 PIK3C2BO00750 1634 aa9.9□□□□□ -0.82
VIPAS39-205ENST00000553691 PACS2Q86VP3 889 aa9.9□□□□□ -0.82
VIPAS39-205ENST00000553691 TRIM52Q96A61 297 aa9.9□□□□□ -0.82
VIPAS39-205ENST00000553691 ARHGAP23Q9P227 1491 aa9.9□□□□□ -0.83
VIPAS39-205ENST00000553691 PHLPP1O60346 1717 aa9.9□□□□□ -0.83
VIPAS39-205ENST00000553691 TET3O43151 1660 aa9.9□□□□□ -0.83
VIPAS39-205ENST00000553691 ONECUT3O60422 494 aaPredicted RBP9.89□□□□□ -0.83
VIPAS39-205ENST00000553691 MEX3CQ5U5Q3 659 aaKnown RBP9.89□□□□□ -0.83
VIPAS39-205ENST00000553691 KDM5AP29375 1690 aaKnown RBP9.89□□□□□ -0.83
VIPAS39-205ENST00000553691 GCC2Q8IWJ2 1684 aa9.89□□□□□ -0.83
VIPAS39-205ENST00000553691 IQGAP3Q86VI3 1631 aa9.89□□□□□ -0.83
VIPAS39-205ENST00000553691 SETBP1Q9Y6X0 1596 aa9.88□□□□□ -0.83
VIPAS39-205ENST00000553691 SLIT1O75093 1534 aa9.88□□□□□ -0.83
VIPAS39-205ENST00000553691 E9PCH4 1651 aa9.88□□□□□ -0.83
VIPAS39-205ENST00000553691 ZNF772Q68DY9 489 aaPredicted RBP9.88□□□□□ -0.83
VIPAS39-205ENST00000553691 PNMA3Q9UL41 463 aa9.88□□□□□ -0.83
VIPAS39-205ENST00000553691 FAM135BQ49AJ0 1406 aa9.88□□□□□ -0.83
VIPAS39-205ENST00000553691 BCAMP50895 628 aa9.87□□□□□ -0.83
VIPAS39-205ENST00000553691 THSD4Q6ZMP0 1018 aa9.87□□□□□ -0.83
VIPAS39-205ENST00000553691 ZFRQ96KR1 1074 aaKnown RBP9.87□□□□□ -0.83
VIPAS39-205ENST00000553691 RPRD2Q5VT52 1461 aaKnown RBP9.86□□□□□ -0.83
VIPAS39-205ENST00000553691 PTGDRQ13258 359 aa9.86□□□□□ -0.83
VIPAS39-205ENST00000553691 NUDT18Q6ZVK8 323 aa9.86□□□□□ -0.83
VIPAS39-205ENST00000553691 TATDN2Q93075 761 aa9.86□□□□□ -0.83
VIPAS39-205ENST00000553691 HCSTQ9UBK5 93 aa9.86□□□□□ -0.83
VIPAS39-205ENST00000553691 FAM98CQ17RN3 349 aaKnown RBP9.85□□□□□ -0.83
VIPAS39-205ENST00000553691 SMYD5Q6GMV2 418 aa9.85□□□□□ -0.83
VIPAS39-205ENST00000553691 LAPTM4BQ86VI4 370 aa9.85□□□□□ -0.83
VIPAS39-205ENST00000553691 ANKK1Q8NFD2 765 aa9.85□□□□□ -0.83
VIPAS39-205ENST00000553691 ADGRB3O60242 1522 aa9.85□□□□□ -0.83
VIPAS39-205ENST00000553691 KANK1Q14678 1352 aa9.85□□□□□ -0.83
VIPAS39-205ENST00000553691 MYO5BQ9ULV0 1848 aa9.84□□□□□ -0.83
VIPAS39-205ENST00000553691 NBPF26B4DH59 902 aa9.84□□□□□ -0.83
VIPAS39-205ENST00000553691 RXRBP28702 533 aa9.84□□□□□ -0.83
VIPAS39-205ENST00000553691 FAM161AQ3B820 660 aa9.84□□□□□ -0.83
VIPAS39-205ENST00000553691 SCAF11Q99590 1463 aaKnown RBP9.84□□□□□ -0.83
VIPAS39-205ENST00000553691 NAIPQ13075 1403 aa9.83□□□□□ -0.84
VIPAS39-205ENST00000553691 TMEM131LA2VDJ0 1609 aa9.83□□□□□ -0.84
VIPAS39-205ENST00000553691 LTKP29376 864 aa9.83□□□□□ -0.84
VIPAS39-205ENST00000553691 EID1Q9Y6B2 187 aa9.83□□□□□ -0.84
VIPAS39-205ENST00000553691 JCADQ9P266 1359 aa9.83□□□□□ -0.84
VIPAS39-205ENST00000553691 FCHSD2O94868 740 aa9.82□□□□□ -0.84
VIPAS39-205ENST00000553691 IDI1Q13907 227 aa9.82□□□□□ -0.84
VIPAS39-205ENST00000553691 TTC13Q8NBP0 860 aa9.82□□□□□ -0.84
VIPAS39-205ENST00000553691 RBM27Q9P2N5 1060 aaKnown RBP9.82□□□□□ -0.84
VIPAS39-205ENST00000553691 TMEM2Q9UHN6 1383 aa9.82□□□□□ -0.84
VIPAS39-205ENST00000553691 TXNDC2Q86VQ3 553 aa9.81□□□□□ -0.84
VIPAS39-205ENST00000553691 LRP5O75197 1615 aa9.81□□□□□ -0.84
VIPAS39-205ENST00000553691 ZFYVE9O95405 1425 aa9.81□□□□□ -0.84
VIPAS39-205ENST00000553691 CDK12Q9NYV4 1490 aaPredicted RBP9.8□□□□□ -0.84
VIPAS39-205ENST00000553691 ITGAEP38570 1179 aa9.8□□□□□ -0.84
VIPAS39-205ENST00000553691 SAMD7Q7Z3H4 446 aa9.8□□□□□ -0.84
VIPAS39-205ENST00000553691 PROSER2Q86WR7 435 aaPredicted RBP9.8□□□□□ -0.84
VIPAS39-205ENST00000553691 HFM1A2PYH4 1435 aa9.8□□□□□ -0.84
VIPAS39-205ENST00000553691 SPHKAPQ2M3C7 1700 aa9.79□□□□□ -0.84
VIPAS39-205ENST00000553691 LRP6O75581 1613 aa9.79□□□□□ -0.84
VIPAS39-205ENST00000553691 TMEM94Q12767 1356 aa9.79□□□□□ -0.84
VIPAS39-205ENST00000553691 SOWAHBA6NEL2 793 aa9.79□□□□□ -0.84
VIPAS39-205ENST00000553691 FECHP22830 423 aa9.79□□□□□ -0.84
VIPAS39-205ENST00000553691 IFFO2Q5TF58 517 aa9.79□□□□□ -0.84
VIPAS39-205ENST00000553691 LRCH3Q96II8 777 aa9.79□□□□□ -0.84
VIPAS39-205ENST00000553691 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.79□□□□□ -0.84
VIPAS39-205ENST00000553691 EP400Q96L91 3159 aa9.79□□□□□ -0.84
VIPAS39-205ENST00000553691 SPATA31A6Q5VVP1 1343 aa9.79□□□□□ -0.84
VIPAS39-205ENST00000553691 NUP155O75694 1391 aa9.78□□□□□ -0.84
VIPAS39-205ENST00000553691 SHPRHQ149N8 1683 aa9.78□□□□□ -0.84
VIPAS39-205ENST00000553691 COL16A1Q07092 1604 aaPredicted RBP9.78□□□□□ -0.84
VIPAS39-205ENST00000553691 NUTM2BA6NNL0 878 aaPredicted RBP9.77□□□□□ -0.85
VIPAS39-205ENST00000553691 NUTM2EB1AL46 878 aaPredicted RBP9.77□□□□□ -0.85
VIPAS39-205ENST00000553691 RNF40O75150 1001 aa9.77□□□□□ -0.85
VIPAS39-205ENST00000553691 NUTM2DQ5VT03 806 aaPredicted RBP9.77□□□□□ -0.85
VIPAS39-205ENST00000553691 GPIHBP1Q8IV16 184 aa9.77□□□□□ -0.85
VIPAS39-205ENST00000553691 NUTM2AQ8IVF1 878 aaPredicted RBP9.77□□□□□ -0.85
VIPAS39-205ENST00000553691 SLC52A1Q9NWF4 448 aa9.77□□□□□ -0.85
VIPAS39-205ENST00000553691 WBP1LQ9NX94 342 aa9.77□□□□□ -0.85
VIPAS39-205ENST00000553691 SLAIN2Q9P270 581 aa9.77□□□□□ -0.85
VIPAS39-205ENST00000553691 HPS5Q9UPZ3 1129 aa9.77□□□□□ -0.85
VIPAS39-205ENST00000553691 MSH6P52701 1360 aa9.76□□□□□ -0.85
VIPAS39-205ENST00000553691 NWD1Q149M9 1564 aa9.76□□□□□ -0.85
VIPAS39-205ENST00000553691 GPR37O15354 613 aa9.76□□□□□ -0.85
VIPAS39-205ENST00000553691 KCNA6P17658 529 aa9.76□□□□□ -0.85
VIPAS39-205ENST00000553691 CLTCL1P53675 1640 aa9.75□□□□□ -0.85
VIPAS39-205ENST00000553691 BCANQ96GW7 911 aa9.75□□□□□ -0.85
VIPAS39-205ENST00000553691 EYA1Q99502 592 aa9.75□□□□□ -0.85
VIPAS39-205ENST00000553691 ADGRG1Q9Y653 693 aa9.75□□□□□ -0.85
VIPAS39-205ENST00000553691 TRPM2O94759 1503 aa9.75□□□□□ -0.85
VIPAS39-205ENST00000553691 NRXN3Q9Y4C0 1643 aa9.74□□□□□ -0.85
VIPAS39-205ENST00000553691 HIC1Q14526 733 aa9.74□□□□□ -0.85
VIPAS39-205ENST00000553691 SWT1Q5T5J6 900 aaKnown RBP9.74□□□□□ -0.85
VIPAS39-205ENST00000553691 PLA2G2EQ9NZK7 142 aa9.74□□□□□ -0.85
VIPAS39-205ENST00000553691 RGS12O14924 1447 aa9.73□□□□□ -0.85
VIPAS39-205ENST00000553691 RIMS2Q9UQ26 1411 aa9.73□□□□□ -0.85
VIPAS39-205ENST00000553691 TULP1O00294 542 aaPredicted RBP9.73□□□□□ -0.85
VIPAS39-205ENST00000553691 GNPATO15228 680 aa9.73□□□□□ -0.85
VIPAS39-205ENST00000553691 C14orf37Q86TY3 774 aa9.73□□□□□ -0.85
VIPAS39-205ENST00000553691 PLEKHG1Q9ULL1 1385 aa9.73□□□□□ -0.85
VIPAS39-205ENST00000553691 ADAMTS13Q76LX8 1427 aa9.73□□□□□ -0.85
VIPAS39-205ENST00000553691 CHD2O14647 1828 aaKnown RBP9.72□□□□□ -0.85
VIPAS39-205ENST00000553691 TSR3Q9UJK0 312 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms