RNA–Protein interactions for RNA: ENST00000553660.5

CNIH1-203, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2 BASIC

Gene CNIH1, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-203ENST00000553660 ANKARQ7Z5J8 1434 aa15.32■□□□□ 0.04
CNIH1-203ENST00000553660 VSIG10Q8N0Z9 540 aa15.31■□□□□ 0.04
CNIH1-203ENST00000553660 WDR70Q9NW82 654 aa15.31■□□□□ 0.04
CNIH1-203ENST00000553660 NPHP3Q7Z494 1330 aa15.31■□□□□ 0.04
CNIH1-203ENST00000553660 EIF3AQ14152 1382 aaKnown RBP15.31■□□□□ 0.04
CNIH1-203ENST00000553660 SHPRHQ149N8 1683 aa15.31■□□□□ 0.04
CNIH1-203ENST00000553660 SNPHO15079 494 aa15.3■□□□□ 0.04
CNIH1-203ENST00000553660 ESCO1Q5FWF5 840 aa15.3■□□□□ 0.04
CNIH1-203ENST00000553660 FMN2Q9NZ56 1722 aa15.3■□□□□ 0.04
CNIH1-203ENST00000553660 NEUROD1Q13562 356 aa15.27■□□□□ 0.04
CNIH1-203ENST00000553660 KIF1AQ12756 1690 aa15.26■□□□□ 0.03
CNIH1-203ENST00000553660 CLSPNQ9HAW4 1339 aa15.26■□□□□ 0.03
CNIH1-203ENST00000553660 WASLO00401 505 aaPredicted RBP15.26■□□□□ 0.03
CNIH1-203ENST00000553660 HOXB3P14651 431 aaPredicted RBP15.26■□□□□ 0.03
CNIH1-203ENST00000553660 NBPF1Q3BBV0 1214 aa15.26■□□□□ 0.03
CNIH1-203ENST00000553660 ARHGEF28Q8N1W1 1705 aaKnown RBP15.26■□□□□ 0.03
CNIH1-203ENST00000553660 PNPLA6Q8IY17 1366 aa15.25■□□□□ 0.03
CNIH1-203ENST00000553660 DOK7Q18PE1 504 aa15.25■□□□□ 0.03
CNIH1-203ENST00000553660 PXDNQ92626 1479 aa15.25■□□□□ 0.03
CNIH1-203ENST00000553660 GPRASP1Q5JY77 1395 aa15.24■□□□□ 0.03
CNIH1-203ENST00000553660 FOXO3O43524 673 aa15.24■□□□□ 0.03
CNIH1-203ENST00000553660 SAFB2Q14151 953 aaKnown RBP eCLIP15.24■□□□□ 0.03
CNIH1-203ENST00000553660 DDX17Q92841 729 aaKnown RBP15.24■□□□□ 0.03
CNIH1-203ENST00000553660 TULP4Q9NRJ4 1543 aa15.23■□□□□ 0.03
CNIH1-203ENST00000553660 SLC24A1O60721 1099 aa15.23■□□□□ 0.03
CNIH1-203ENST00000553660 ILDR2Q71H61 639 aa15.23■□□□□ 0.03
CNIH1-203ENST00000553660 RGS17Q9UGC6 210 aaPredicted RBP15.23■□□□□ 0.03
CNIH1-203ENST00000553660 TONSLQ96HA7 1378 aa15.23■□□□□ 0.03
CNIH1-203ENST00000553660 LRP6O75581 1613 aa15.22■□□□□ 0.03
CNIH1-203ENST00000553660 TRPM1Q7Z4N2 1603 aa15.22■□□□□ 0.03
CNIH1-203ENST00000553660 MINK1Q8N4C8 1332 aaPredicted RBP15.21■□□□□ 0.03
CNIH1-203ENST00000553660 NUTM2FA1L443 756 aa15.21■□□□□ 0.03
CNIH1-203ENST00000553660 SLC34A2O95436 690 aa15.21■□□□□ 0.03
CNIH1-203ENST00000553660 TIMELESSQ9UNS1 1208 aa15.21■□□□□ 0.03
CNIH1-203ENST00000553660 CENPJQ9HC77 1338 aaPredicted RBP15.2■□□□□ 0.02
CNIH1-203ENST00000553660 PSME1Q06323 249 aa15.2■□□□□ 0.02
CNIH1-203ENST00000553660 CAMK2BQ13554 666 aa15.2■□□□□ 0.02
CNIH1-203ENST00000553660 HIRIP3Q9BW71 556 aaPredicted RBP15.2■□□□□ 0.02
CNIH1-203ENST00000553660 SBNO1A3KN83 1393 aa15.2■□□□□ 0.02
CNIH1-203ENST00000553660 ROCK2O75116 1388 aaKnown RBP15.2■□□□□ 0.02
CNIH1-203ENST00000553660 USP32Q8NFA0 1604 aa15.2■□□□□ 0.02
CNIH1-203ENST00000553660 COL22A1Q8NFW1 1626 aaPredicted RBP15.2■□□□□ 0.02
CNIH1-203ENST00000553660 SPATA31A3Q5VYP0 1347 aa15.19■□□□□ 0.02
CNIH1-203ENST00000553660 PRR36Q9H6K5 1346 aa15.19■□□□□ 0.02
CNIH1-203ENST00000553660 RIMBP2O15034 1052 aa15.18■□□□□ 0.02
CNIH1-203ENST00000553660 E2F4Q16254 413 aa15.18■□□□□ 0.02
CNIH1-203ENST00000553660 NBPF8Q3BBV2 869 aa15.18■□□□□ 0.02
CNIH1-203ENST00000553660 ZNF772Q68DY9 489 aaPredicted RBP15.18■□□□□ 0.02
CNIH1-203ENST00000553660 KRT28Q7Z3Y7 464 aa15.18■□□□□ 0.02
CNIH1-203ENST00000553660 ATP7BP35670 1465 aa15.18■□□□□ 0.02
CNIH1-203ENST00000553660 RALGAPBQ86X10 1494 aa15.17■□□□□ 0.02
CNIH1-203ENST00000553660 SOCS7O14512 581 aa15.17■□□□□ 0.02
CNIH1-203ENST00000553660 ZNF710Q8N1W2 664 aa15.17■□□□□ 0.02
CNIH1-203ENST00000553660 NUDT16Q96DE0 195 aaKnown RBP15.17■□□□□ 0.02
CNIH1-203ENST00000553660 CDK19Q9BWU1 502 aa15.17■□□□□ 0.02
CNIH1-203ENST00000553660 SBNO2Q9Y2G9 1366 aa15.16■□□□□ 0.02
CNIH1-203ENST00000553660 MEX3CQ5U5Q3 659 aaKnown RBP15.16■□□□□ 0.02
CNIH1-203ENST00000553660 TNS3Q68CZ2 1445 aa15.16■□□□□ 0.02
CNIH1-203ENST00000553660 ARHGEF10O15013 1369 aa15.15■□□□□ 0.02
CNIH1-203ENST00000553660 PLEKHG3A1L390 1219 aa15.15■□□□□ 0.02
CNIH1-203ENST00000553660 PCGF6Q9BYE7 350 aa15.15■□□□□ 0.02
CNIH1-203ENST00000553660 ZSWIM6Q9HCJ5 1215 aa15.15■□□□□ 0.02
CNIH1-203ENST00000553660 POLR3AO14802 1390 aaPredicted RBP15.14■□□□□ 0.01
CNIH1-203ENST00000553660 RGPD8O14715 1765 aaPredicted RBP15.14■□□□□ 0.01
CNIH1-203ENST00000553660 NUTM2BA6NNL0 878 aaPredicted RBP15.14■□□□□ 0.01
CNIH1-203ENST00000553660 NUTM2EB1AL46 878 aaPredicted RBP15.14■□□□□ 0.01
CNIH1-203ENST00000553660 NUTM2AQ8IVF1 878 aaPredicted RBP15.14■□□□□ 0.01
CNIH1-203ENST00000553660 OXER1Q8TDS5 423 aa15.14■□□□□ 0.01
CNIH1-203ENST00000553660 PTCD2Q8WV60 388 aaKnown RBP15.14■□□□□ 0.01
CNIH1-203ENST00000553660 EMILIN3Q9NT22 766 aa15.14■□□□□ 0.01
CNIH1-203ENST00000553660 XPCQ01831 940 aaPredicted RBP15.13■□□□□ 0.01
CNIH1-203ENST00000553660 ITSN1Q15811 1721 aa15.13■□□□□ 0.01
CNIH1-203ENST00000553660 POTEAQ6S8J7 498 aa15.13■□□□□ 0.01
CNIH1-203ENST00000553660 PMFBP1Q8TBY8 1022 aa15.13■□□□□ 0.01
CNIH1-203ENST00000553660 FAM163AQ96GL9 167 aaPredicted RBP15.13■□□□□ 0.01
CNIH1-203ENST00000553660 BRD4O60885 1362 aaPredicted RBP15.12■□□□□ 0.01
CNIH1-203ENST00000553660 FNBP4Q8N3X1 1017 aaPredicted RBP15.12■□□□□ 0.01
CNIH1-203ENST00000553660 NGDNQ8NEJ9 315 aaKnown RBP15.12■□□□□ 0.01
CNIH1-203ENST00000553660 UPF1Q92900 1129 aaKnown RBP eCLIP15.12■□□□□ 0.018e-6■□□□□ 8.5
CNIH1-203ENST00000553660 CARD11Q9BXL7 1154 aa15.12■□□□□ 0.01
CNIH1-203ENST00000553660 EVC2Q86UK5 1308 aa15.12■□□□□ 0.01
CNIH1-203ENST00000553660 PCDHGA4Q9Y5G9 962 aa15.11■□□□□ 0.01
CNIH1-203ENST00000553660 TOPAZ1Q8N9V7 1692 aa15.1■□□□□ 0.01
CNIH1-203ENST00000553660 QRICH2Q9H0J4 1663 aa15.1■□□□□ 0.01
CNIH1-203ENST00000553660 ST18O60284 1047 aa15.1■□□□□ 0.01
CNIH1-203ENST00000553660 AFF2P51816 1311 aa15.1■□□□□ 0.01
CNIH1-203ENST00000553660 TBC1D12O60347 775 aa15.09■□□□□ 0.01
CNIH1-203ENST00000553660 SRPK2P78362 688 aaKnown RBP15.09■□□□□ 0.01
CNIH1-203ENST00000553660 GPR153Q6NV75 609 aa15.09■□□□□ 0.01
CNIH1-203ENST00000553660 C8orf37Q96NL8 207 aa15.09■□□□□ 0.01
CNIH1-203ENST00000553660 PUS7Q96PZ0 661 aaKnown RBP15.09■□□□□ 0.01
CNIH1-203ENST00000553660 TRPM3Q9HCF6 1732 aaPredicted RBP15.09■□□□□ 0.01
CNIH1-203ENST00000553660 ADAMTS2O95450 1211 aa15.08■□□□□ 0
CNIH1-203ENST00000553660 NGLY1Q96IV0 654 aa15.08■□□□□ 0
CNIH1-203ENST00000553660 ACEP12821 1306 aa15.08■□□□□ 0
CNIH1-203ENST00000553660 CDK12Q9NYV4 1490 aaPredicted RBP15.08■□□□□ 0
CNIH1-203ENST00000553660 HOXB1P14653 301 aaPredicted RBP15.07■□□□□ 0
CNIH1-203ENST00000553660 ARSIQ5FYB1 569 aa15.07■□□□□ 0
CNIH1-203ENST00000553660 ATAD2Q6PL18 1390 aa15.07■□□□□ 0
CNIH1-203ENST00000553660 KCNV2Q8TDN2 545 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms