RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 USP32Q8NFA0 1604 aa13.96□□□□□ -0.17
NRDE2-202ENST00000553409 CWC22Q9HCG8 908 aaKnown RBP13.96□□□□□ -0.18
NRDE2-202ENST00000553409 ZBTB7CA1YPR0 619 aa13.95□□□□□ -0.18
NRDE2-202ENST00000553409 FOXD4L5Q5VV16 416 aaPredicted RBP13.95□□□□□ -0.18
NRDE2-202ENST00000553409 FOXD4L4Q8WXT5 416 aaPredicted RBP13.95□□□□□ -0.18
NRDE2-202ENST00000553409 DEPDC5O75140 1603 aa13.95□□□□□ -0.18
NRDE2-202ENST00000553409 ZFYVE16Q7Z3T8 1539 aa13.95□□□□□ -0.18
NRDE2-202ENST00000553409 BRPF1P55201 1214 aaPredicted RBP13.95□□□□□ -0.18
NRDE2-202ENST00000553409 MRPL50Q8N5N7 158 aaKnown RBP13.95□□□□□ -0.18
NRDE2-202ENST00000553409 C16orf71Q8IYS4 520 aaPredicted RBP13.94□□□□□ -0.18
NRDE2-202ENST00000553409 TSPYL6Q8N831 410 aa13.94□□□□□ -0.18
NRDE2-202ENST00000553409 JARID2Q92833 1246 aaPredicted RBP13.94□□□□□ -0.18
NRDE2-202ENST00000553409 ELL2O00472 640 aaPredicted RBP13.94□□□□□ -0.18
NRDE2-202ENST00000553409 VAMP4O75379 141 aa13.94□□□□□ -0.18
NRDE2-202ENST00000553409 CHMP4BQ9H444 224 aaKnown RBP13.94□□□□□ -0.18
NRDE2-202ENST00000553409 EVC2Q86UK5 1308 aa13.93□□□□□ -0.18
NRDE2-202ENST00000553409 QRICH2Q9H0J4 1663 aa13.93□□□□□ -0.18
NRDE2-202ENST00000553409 VWDEQ8N2E2 1590 aa13.93□□□□□ -0.18
NRDE2-202ENST00000553409 ZHX1Q9UKY1 873 aaPredicted RBP13.93□□□□□ -0.18
NRDE2-202ENST00000553409 TTC22Q5TAA0 569 aa13.93□□□□□ -0.18
NRDE2-202ENST00000553409 COL3A1P02461 1466 aaPredicted RBP13.92□□□□□ -0.18
NRDE2-202ENST00000553409 SAFB2Q14151 953 aaKnown RBP eCLIP13.92□□□□□ -0.18
NRDE2-202ENST00000553409 ARHGAP45Q92619 1136 aa13.92□□□□□ -0.18
NRDE2-202ENST00000553409 THUMPD2Q9BTF0 503 aaKnown RBP13.92□□□□□ -0.18
NRDE2-202ENST00000553409 SETBP1Q9Y6X0 1596 aa13.92□□□□□ -0.18
NRDE2-202ENST00000553409 ST18O60284 1047 aa13.92□□□□□ -0.18
NRDE2-202ENST00000553409 ATAD2Q6PL18 1390 aa13.92□□□□□ -0.18
NRDE2-202ENST00000553409 PIK3R4Q99570 1358 aa13.92□□□□□ -0.18
NRDE2-202ENST00000553409 MROH2AA6NES4 1674 aa13.92□□□□□ -0.18
NRDE2-202ENST00000553409 DIAPH1O60610 1272 aaKnown RBP13.92□□□□□ -0.18
NRDE2-202ENST00000553409 PTMAP06454 111 aaKnown RBP13.92□□□□□ -0.18
NRDE2-202ENST00000553409 OTUD7AQ8TE49 926 aaPredicted RBP13.92□□□□□ -0.18
NRDE2-202ENST00000553409 ZNF428Q96B54 188 aa13.92□□□□□ -0.18
NRDE2-202ENST00000553409 INO80Q9ULG1 1556 aaPredicted RBP13.91□□□□□ -0.18
NRDE2-202ENST00000553409 TSC1Q92574 1164 aa13.91□□□□□ -0.18
NRDE2-202ENST00000553409 CCDC94Q9BW85 323 aaPredicted RBP13.91□□□□□ -0.18
NRDE2-202ENST00000553409 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.91□□□□□ -0.18
NRDE2-202ENST00000553409 KIF1BO60333 1816 aa13.91□□□□□ -0.18
NRDE2-202ENST00000553409 IFT172Q9UG01 1749 aa13.91□□□□□ -0.18
NRDE2-202ENST00000553409 INTS3Q68E01 1043 aaKnown RBP13.91□□□□□ -0.18
NRDE2-202ENST00000553409 MPNDQ8N594 471 aa13.91□□□□□ -0.18
NRDE2-202ENST00000553409 ADGRB1O14514 1584 aa13.9□□□□□ -0.18
NRDE2-202ENST00000553409 A0A1W2PP64 1363 aa13.9□□□□□ -0.18
NRDE2-202ENST00000553409 ZC3H13Q5T200 1668 aaKnown RBP13.9□□□□□ -0.18
NRDE2-202ENST00000553409 KIAA2012Q0VF49 1180 aa13.9□□□□□ -0.18
NRDE2-202ENST00000553409 ABCC4O15439 1325 aa13.9□□□□□ -0.18
NRDE2-202ENST00000553409 FYB1O15117 783 aa13.9□□□□□ -0.18
NRDE2-202ENST00000553409 PUS7Q96PZ0 661 aaKnown RBP13.9□□□□□ -0.18
NRDE2-202ENST00000553409 PTCH1Q13635 1447 aa13.9□□□□□ -0.18
NRDE2-202ENST00000553409 SDSP20132 328 aa13.89□□□□□ -0.19
NRDE2-202ENST00000553409 DNTTIP2Q5QJE6 756 aaKnown RBP13.89□□□□□ -0.19
NRDE2-202ENST00000553409 DCTPP1Q9H773 170 aa13.89□□□□□ -0.19
NRDE2-202ENST00000553409 PPRC1Q5VV67 1664 aaKnown RBP13.89□□□□□ -0.19
NRDE2-202ENST00000553409 NUTM2DQ5VT03 806 aaPredicted RBP13.89□□□□□ -0.19
NRDE2-202ENST00000553409 MYRIPQ8NFW9 859 aa13.89□□□□□ -0.19
NRDE2-202ENST00000553409 PRKAR2BP31323 418 aa13.89□□□□□ -0.19
NRDE2-202ENST00000553409 CFAP44Q96MT7 982 aa13.89□□□□□ -0.19
NRDE2-202ENST00000553409 TULP4Q9NRJ4 1543 aa13.88□□□□□ -0.19
NRDE2-202ENST00000553409 MBD3O95983 291 aa13.88□□□□□ -0.19
NRDE2-202ENST00000553409 ZSCAN20P17040 1043 aaPredicted RBP13.88□□□□□ -0.19
NRDE2-202ENST00000553409 ZNF830Q96NB3 372 aaPredicted RBP13.88□□□□□ -0.19
NRDE2-202ENST00000553409 TSPY26PQ9H489 355 aa13.87□□□□□ -0.19
NRDE2-202ENST00000553409 FCHSD2O94868 740 aa13.87□□□□□ -0.19
NRDE2-202ENST00000553409 DMTNQ08495 405 aa13.87□□□□□ -0.19
NRDE2-202ENST00000553409 ZNF710Q8N1W2 664 aa13.87□□□□□ -0.19
NRDE2-202ENST00000553409 PLEKHG5O94827 1062 aa13.87□□□□□ -0.19
NRDE2-202ENST00000553409 PHACTR3Q96KR7 559 aa13.87□□□□□ -0.19
NRDE2-202ENST00000553409 REREQ9P2R6 1566 aa13.87□□□□□ -0.19
NRDE2-202ENST00000553409 APBB1O00213 710 aa13.86□□□□□ -0.19
NRDE2-202ENST00000553409 SMARCA5O60264 1052 aaPredicted RBP13.86□□□□□ -0.19
NRDE2-202ENST00000553409 SRPK2P78362 688 aaKnown RBP13.86□□□□□ -0.19
NRDE2-202ENST00000553409 MROH1Q8NDA8 1641 aa13.86□□□□□ -0.19
NRDE2-202ENST00000553409 ADGRB3O60242 1522 aa13.86□□□□□ -0.19
NRDE2-202ENST00000553409 A0A0U1RQG5 324 aaPredicted RBP13.86□□□□□ -0.19
NRDE2-202ENST00000553409 FBLN1P23142 703 aa13.86□□□□□ -0.19
NRDE2-202ENST00000553409 ATP7AQ04656 1500 aa13.85□□□□□ -0.19
NRDE2-202ENST00000553409 UTP14CQ5TAP6 766 aaKnown RBP13.85□□□□□ -0.19
NRDE2-202ENST00000553409 TMX3Q96JJ7 454 aa13.85□□□□□ -0.19
NRDE2-202ENST00000553409 MBIPQ9NS73 344 aa13.85□□□□□ -0.19
NRDE2-202ENST00000553409 EFCAB6Q5THR3 1501 aa13.85□□□□□ -0.19
NRDE2-202ENST00000553409 FAM177BA6PVY3 158 aa13.85□□□□□ -0.19
NRDE2-202ENST00000553409 CASC1Q6TDU7 716 aa13.85□□□□□ -0.19
NRDE2-202ENST00000553409 TWISTNBQ3B726 338 aaPredicted RBP13.84□□□□□ -0.19
NRDE2-202ENST00000553409 C17orf53Q8N3J3 647 aaPredicted RBP13.84□□□□□ -0.19
NRDE2-202ENST00000553409 ERCC6L2Q5T890 1561 aa13.84□□□□□ -0.19
NRDE2-202ENST00000553409 REC8O95072 547 aa13.84□□□□□ -0.19
NRDE2-202ENST00000553409 BRD1O95696 1058 aa13.84□□□□□ -0.19
NRDE2-202ENST00000553409 HMOX1P09601 288 aa13.84□□□□□ -0.19
NRDE2-202ENST00000553409 NEK4P51957 841 aa13.84□□□□□ -0.19
NRDE2-202ENST00000553409 CBX1P83916 185 aa13.84□□□□□ -0.19
NRDE2-202ENST00000553409 FOXD4L6Q3SYB3 417 aaPredicted RBP13.84□□□□□ -0.19
NRDE2-202ENST00000553409 FOXD4L3Q6VB84 417 aaPredicted RBP13.84□□□□□ -0.19
NRDE2-202ENST00000553409 C8orf58Q8NAV2 365 aa13.84□□□□□ -0.19
NRDE2-202ENST00000553409 SENP3Q9H4L4 574 aaPredicted RBP13.84□□□□□ -0.19
NRDE2-202ENST00000553409 PNPLA6Q8IY17 1366 aa13.84□□□□□ -0.19
NRDE2-202ENST00000553409 NOLC1Q14978 699 aaKnown RBP eCLIP13.84□□□□□ -0.19
NRDE2-202ENST00000553409 API5Q9BZZ5 524 aaKnown RBP13.84□□□□□ -0.19
NRDE2-202ENST00000553409 FANCAO15360 1455 aa13.83□□□□□ -0.19
NRDE2-202ENST00000553409 PIBF1Q8WXW3 757 aa13.83□□□□□ -0.19
NRDE2-202ENST00000553409 PRIMPOLQ96LW4 560 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms