RNA–Protein interactions for RNA: ENST00000553058.5

PPFIA2-228, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5

Gene PPFIA2, Length 917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-228ENST00000553058 SREK1Q8WXA9 508 aaKnown RBP12.03□□□□□ -0.48
PPFIA2-228ENST00000553058 TSC1Q92574 1164 aa12.03□□□□□ -0.48
PPFIA2-228ENST00000553058 EIF4G2P78344 907 aaKnown RBP eCLIP12.02□□□□□ -0.49
PPFIA2-228ENST00000553058 EFCAB2Q5VUJ9 269 aa12.02□□□□□ -0.49
PPFIA2-228ENST00000553058 RDH13Q8NBN7 331 aa12.02□□□□□ -0.49
PPFIA2-228ENST00000553058 PCF11O94913 1555 aaKnown RBP12.01□□□□□ -0.49
PPFIA2-228ENST00000553058 CANXP27824 592 aaKnown RBP12.01□□□□□ -0.49
PPFIA2-228ENST00000553058 CHMP4AQ9BY43 222 aa12.01□□□□□ -0.49
PPFIA2-228ENST00000553058 TMEM134Q9H6X4 195 aa12.01□□□□□ -0.49
PPFIA2-228ENST00000553058 CASKIN1Q8WXD9 1431 aa12.01□□□□□ -0.49
PPFIA2-228ENST00000553058 LRRIQ1Q96JM4 1722 aa12□□□□□ -0.49
PPFIA2-228ENST00000553058 ATMINO43313 823 aaPredicted RBP12□□□□□ -0.49
PPFIA2-228ENST00000553058 PNMA1Q8ND90 353 aa12□□□□□ -0.49
PPFIA2-228ENST00000553058 SLAIN2Q9P270 581 aa12□□□□□ -0.49
PPFIA2-228ENST00000553058 MTMR2Q13614 643 aa11.99□□□□□ -0.49
PPFIA2-228ENST00000553058 AFAP1Q8N556 730 aa11.99□□□□□ -0.49
PPFIA2-228ENST00000553058 ZNF454Q8N9F8 522 aa11.99□□□□□ -0.49
PPFIA2-228ENST00000553058 ADAM33Q9BZ11 813 aa11.99□□□□□ -0.49
PPFIA2-228ENST00000553058 ATP10AO60312 1499 aa11.99□□□□□ -0.49
PPFIA2-228ENST00000553058 RIMS1Q86UR5 1692 aaKnown RBP11.98□□□□□ -0.49
PPFIA2-228ENST00000553058 ARHGEF12Q9NZN5 1544 aa11.98□□□□□ -0.49
PPFIA2-228ENST00000553058 CFAP99D6REC4 459 aa11.98□□□□□ -0.49
PPFIA2-228ENST00000553058 SERPINB4P48594 390 aa11.98□□□□□ -0.49
PPFIA2-228ENST00000553058 GUCA2AQ02747 115 aa11.98□□□□□ -0.49
PPFIA2-228ENST00000553058 NPAS4Q8IUM7 802 aa11.98□□□□□ -0.49
PPFIA2-228ENST00000553058 KDM5CP41229 1560 aa11.97□□□□□ -0.49
PPFIA2-228ENST00000553058 ANKRD33BA6NCL7 494 aa11.97□□□□□ -0.49
PPFIA2-228ENST00000553058 VAMP1P23763 118 aa11.97□□□□□ -0.49
PPFIA2-228ENST00000553058 NUDT18Q6ZVK8 323 aa11.97□□□□□ -0.49
PPFIA2-228ENST00000553058 SLF2Q8IX21 1173 aa11.97□□□□□ -0.49
PPFIA2-228ENST00000553058 C9orf84Q5VXU9 1444 aa11.96□□□□□ -0.49
PPFIA2-228ENST00000553058 USP17L3A6NCW0 530 aa11.96□□□□□ -0.49
PPFIA2-228ENST00000553058 USP17L4A6NCW7 530 aa11.96□□□□□ -0.49
PPFIA2-228ENST00000553058 C3orf80F5H4A9 247 aa11.96□□□□□ -0.49
PPFIA2-228ENST00000553058 PIK3CDO00329 1044 aa11.96□□□□□ -0.49
PPFIA2-228ENST00000553058 PPM1GO15355 546 aaPredicted RBP11.96□□□□□ -0.49
PPFIA2-228ENST00000553058 GCGRP47871 477 aa11.96□□□□□ -0.49
PPFIA2-228ENST00000553058 MLECQ14165 292 aa11.96□□□□□ -0.49
PPFIA2-228ENST00000553058 NR6A1Q15406 480 aa11.96□□□□□ -0.49
PPFIA2-228ENST00000553058 ZNF326Q5BKZ1 582 aaKnown RBP11.96□□□□□ -0.49
PPFIA2-228ENST00000553058 USP17L2Q6R6M4 530 aa11.96□□□□□ -0.49
PPFIA2-228ENST00000553058 USP17L1Q7RTZ2 530 aa11.96□□□□□ -0.49
PPFIA2-228ENST00000553058 NFATC2IPQ8NCF5 419 aa11.96□□□□□ -0.49
PPFIA2-228ENST00000553058 HLA-CQ95604 372 aa11.96□□□□□ -0.49
PPFIA2-228ENST00000553058 MYO5CQ9NQX4 1742 aa11.96□□□□□ -0.49
PPFIA2-228ENST00000553058 ZNF518AQ6AHZ1 1483 aa11.95□□□□□ -0.5
PPFIA2-228ENST00000553058 CLIP1P30622 1438 aa11.95□□□□□ -0.5
PPFIA2-228ENST00000553058 TRAPPC8Q9Y2L5 1435 aa11.95□□□□□ -0.5
PPFIA2-228ENST00000553058 SMARCA5O60264 1052 aaPredicted RBP11.95□□□□□ -0.5
PPFIA2-228ENST00000553058 HSPA2P54652 639 aa11.95□□□□□ -0.5
PPFIA2-228ENST00000553058 ZC3H6P61129 1189 aaKnown RBP11.95□□□□□ -0.5
PPFIA2-228ENST00000553058 ASTLQ6HA08 431 aaPredicted RBP11.95□□□□□ -0.5
PPFIA2-228ENST00000553058 BIN2Q9UBW5 565 aaPredicted RBP11.95□□□□□ -0.5
PPFIA2-228ENST00000553058 ARHGAP5Q13017 1502 aa11.95□□□□□ -0.5
PPFIA2-228ENST00000553058 FAM196BA6NMK8 535 aa11.94□□□□□ -0.5
PPFIA2-228ENST00000553058 SPATA32Q96LK8 384 aa11.94□□□□□ -0.5
PPFIA2-228ENST00000553058 CCDC18Q5T9S5 1454 aa11.94□□□□□ -0.5
PPFIA2-228ENST00000553058 MLH3Q9UHC1 1453 aa11.94□□□□□ -0.5
PPFIA2-228ENST00000553058 CLP1Q92989 425 aaKnown RBP11.93□□□□□ -0.5
PPFIA2-228ENST00000553058 TSKSQ9UJT2 592 aa11.93□□□□□ -0.5
PPFIA2-228ENST00000553058 FYCO1Q9BQS8 1478 aa11.93□□□□□ -0.5
PPFIA2-228ENST00000553058 DIP2CQ9Y2E4 1556 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 ABCC1P33527 1531 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 CDC42BPBQ9Y5S2 1711 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 USP17L15C9J2P7 530 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 USP17L10C9JJH3 530 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 USP17L13C9JLJ4 530 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 USP17L12C9JPN9 530 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 USP17L11C9JVI0 530 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 USP17L21D6R901 530 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 USP17L18D6R9N7 530 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 USP17L22D6RA61 530 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 USP17L17D6RBQ6 530 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 USP17L19D6RCP7 530 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 USP17L20D6RJB6 530 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 USP17L24Q0WX57 530 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 CRTC2Q53ET0 693 aaPredicted RBP11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 PLEKHM2Q8IWE5 1019 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 FBXO41Q8TF61 875 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 REREQ9P2R6 1566 aa11.92□□□□□ -0.5
PPFIA2-228ENST00000553058 PREX2Q70Z35 1606 aa11.91□□□□□ -0.5
PPFIA2-228ENST00000553058 USP17L5A8MUK1 530 aa11.91□□□□□ -0.5
PPFIA2-228ENST00000553058 SKIP12755 728 aa11.91□□□□□ -0.5
PPFIA2-228ENST00000553058 CEBPAP49715 358 aaPredicted RBP11.91□□□□□ -0.5
PPFIA2-228ENST00000553058 NR1H3Q13133 447 aa11.91□□□□□ -0.5
PPFIA2-228ENST00000553058 NBPF26B4DH59 902 aa11.9□□□□□ -0.5
PPFIA2-228ENST00000553058 ATP2B4P23634 1241 aa11.9□□□□□ -0.5
PPFIA2-228ENST00000553058 FAM200AQ8TCP9 573 aa11.9□□□□□ -0.5
PPFIA2-228ENST00000553058 PNMA3Q9UL41 463 aa11.9□□□□□ -0.5
PPFIA2-228ENST00000553058 GPATCH8Q9UKJ3 1502 aaKnown RBP11.9□□□□□ -0.5
PPFIA2-228ENST00000553058 ABCA6Q8N139 1617 aa11.89□□□□□ -0.51
PPFIA2-228ENST00000553058 COL9A1P20849 921 aa11.89□□□□□ -0.51
PPFIA2-228ENST00000553058 UBXN4Q92575 508 aa11.89□□□□□ -0.51
PPFIA2-228ENST00000553058 TATDN2Q93075 761 aa11.89□□□□□ -0.51
PPFIA2-228ENST00000553058 AGLP35573 1532 aa11.89□□□□□ -0.51
PPFIA2-228ENST00000553058 FER1L4A9Z1Z3 1794 aa11.89□□□□□ -0.51
PPFIA2-228ENST00000553058 C6orf229H3BNL8 230 aa11.88□□□□□ -0.51
PPFIA2-228ENST00000553058 C3orf67Q6ZVT6 689 aa11.88□□□□□ -0.51
PPFIA2-228ENST00000553058 CDCA7Q9BWT1 371 aaPredicted RBP11.88□□□□□ -0.51
PPFIA2-228ENST00000553058 PPP1R1BQ9UD71 204 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms