RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 POLA2Q14181 598 aa10.64□□□□□ -0.71
NPAS3-213ENST00000552874 NUTM2GQ5VZR2 741 aa10.64□□□□□ -0.71
NPAS3-213ENST00000552874 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.64□□□□□ -0.71
NPAS3-213ENST00000552874 ABTB2Q8N961 1025 aa10.64□□□□□ -0.71
NPAS3-213ENST00000552874 ATRNO75882 1429 aa10.64□□□□□ -0.71
NPAS3-213ENST00000552874 COL3A1P02461 1466 aaPredicted RBP10.63□□□□□ -0.71
NPAS3-213ENST00000552874 LRRC37A3O60309 1634 aa10.63□□□□□ -0.71
NPAS3-213ENST00000552874 RGS17Q9UGC6 210 aaPredicted RBP10.63□□□□□ -0.71
NPAS3-213ENST00000552874 AATKQ6ZMQ8 1374 aa10.63□□□□□ -0.71
NPAS3-213ENST00000552874 CDK12Q9NYV4 1490 aaPredicted RBP10.62□□□□□ -0.71
NPAS3-213ENST00000552874 CGNL1Q0VF96 1302 aa10.62□□□□□ -0.71
NPAS3-213ENST00000552874 PKD1L3Q7Z443 1732 aa10.62□□□□□ -0.71
NPAS3-213ENST00000552874 NCAPD2Q15021 1401 aa10.62□□□□□ -0.71
NPAS3-213ENST00000552874 GCP02774 474 aa10.62□□□□□ -0.71
NPAS3-213ENST00000552874 NLRP6P59044 892 aa10.62□□□□□ -0.71
NPAS3-213ENST00000552874 RTL1A6NKG5 1358 aa10.62□□□□□ -0.71
NPAS3-213ENST00000552874 NLRP13Q86W25 1043 aa10.61□□□□□ -0.71
NPAS3-213ENST00000552874 FNBP4Q8N3X1 1017 aaPredicted RBP10.61□□□□□ -0.71
NPAS3-213ENST00000552874 POLR3GLQ9BT43 218 aa10.61□□□□□ -0.71
NPAS3-213ENST00000552874 GGNBP2Q9H3C7 697 aa10.61□□□□□ -0.71
NPAS3-213ENST00000552874 LMOD2Q6P5Q4 547 aa10.6□□□□□ -0.71
NPAS3-213ENST00000552874 ARHGEF25Q86VW2 580 aa10.6□□□□□ -0.71
NPAS3-213ENST00000552874 PARD3Q8TEW0 1356 aa10.6□□□□□ -0.71
NPAS3-213ENST00000552874 SBF2Q86WG5 1849 aa10.6□□□□□ -0.71
NPAS3-213ENST00000552874 AFF2P51816 1311 aa10.59□□□□□ -0.71
NPAS3-213ENST00000552874 BLMP54132 1417 aaPredicted RBP10.59□□□□□ -0.71
NPAS3-213ENST00000552874 FAM83GA6ND36 823 aa10.59□□□□□ -0.71
NPAS3-213ENST00000552874 NUTM2BA6NNL0 878 aaPredicted RBP10.59□□□□□ -0.71
NPAS3-213ENST00000552874 NUTM2EB1AL46 878 aaPredicted RBP10.59□□□□□ -0.71
NPAS3-213ENST00000552874 ADAMTS2O95450 1211 aa10.59□□□□□ -0.71
NPAS3-213ENST00000552874 NUTM2AQ8IVF1 878 aaPredicted RBP10.59□□□□□ -0.71
NPAS3-213ENST00000552874 KIF24Q5T7B8 1368 aa10.59□□□□□ -0.71
NPAS3-213ENST00000552874 MAP3K19Q56UN5 1328 aa10.58□□□□□ -0.71
NPAS3-213ENST00000552874 DISP2A7MBM2 1401 aa10.58□□□□□ -0.72
NPAS3-213ENST00000552874 ZNF316A6NFI3 1004 aaPredicted RBP10.57□□□□□ -0.72
NPAS3-213ENST00000552874 FBLN1P23142 703 aa10.57□□□□□ -0.72
NPAS3-213ENST00000552874 KCNH5Q8NCM2 988 aa10.57□□□□□ -0.72
NPAS3-213ENST00000552874 COG3Q96JB2 828 aa10.57□□□□□ -0.72
NPAS3-213ENST00000552874 RGS12O14924 1447 aa10.57□□□□□ -0.72
NPAS3-213ENST00000552874 FLT4P35916 1363 aa10.56□□□□□ -0.72
NPAS3-213ENST00000552874 ZC3H6P61129 1189 aaKnown RBP10.56□□□□□ -0.72
NPAS3-213ENST00000552874 CHRNA2Q15822 529 aa10.56□□□□□ -0.72
NPAS3-213ENST00000552874 C8orf37Q96NL8 207 aa10.56□□□□□ -0.72
NPAS3-213ENST00000552874 AXIN2Q9Y2T1 843 aa10.56□□□□□ -0.72
NPAS3-213ENST00000552874 POTEAQ6S8J7 498 aa10.55□□□□□ -0.72
NPAS3-213ENST00000552874 PRDM11Q9NQV5 511 aa10.55□□□□□ -0.72
NPAS3-213ENST00000552874 KNSTRNQ9Y448 316 aa10.55□□□□□ -0.72
NPAS3-213ENST00000552874 TNS1Q9HBL0 1735 aaKnown RBP10.55□□□□□ -0.72
NPAS3-213ENST00000552874 TOGARAM1Q9Y4F4 1720 aa10.55□□□□□ -0.72
NPAS3-213ENST00000552874 ERBB3P21860 1342 aa10.55□□□□□ -0.72
NPAS3-213ENST00000552874 INSRP06213 1382 aa10.54□□□□□ -0.72
NPAS3-213ENST00000552874 PLEKHG5O94827 1062 aa10.54□□□□□ -0.72
NPAS3-213ENST00000552874 CRB1P82279 1406 aa10.54□□□□□ -0.72
NPAS3-213ENST00000552874 RRS1Q15050 365 aaKnown RBP10.54□□□□□ -0.72
NPAS3-213ENST00000552874 POLKQ9UBT6 870 aa10.54□□□□□ -0.72
NPAS3-213ENST00000552874 EMILIN1Q9Y6C2 1016 aa10.54□□□□□ -0.72
NPAS3-213ENST00000552874 DLG5Q8TDM6 1919 aa10.54□□□□□ -0.72
NPAS3-213ENST00000552874 SOX12O15370 315 aa10.53□□□□□ -0.72
NPAS3-213ENST00000552874 HOXC9P31274 260 aa10.53□□□□□ -0.72
NPAS3-213ENST00000552874 DDX10Q13206 875 aaKnown RBP10.53□□□□□ -0.72
NPAS3-213ENST00000552874 MEX3CQ5U5Q3 659 aaKnown RBP10.53□□□□□ -0.72
NPAS3-213ENST00000552874 UNC5CLQ8IV45 518 aa10.53□□□□□ -0.72
NPAS3-213ENST00000552874 BTG4Q9NY30 223 aa10.53□□□□□ -0.72
NPAS3-213ENST00000552874 ADAMTS7Q9UKP4 1686 aa10.53□□□□□ -0.72
NPAS3-213ENST00000552874 SPATA31A5Q5VU36 1347 aa10.53□□□□□ -0.72
NPAS3-213ENST00000552874 SPATA31A7Q8IWB4 1347 aa10.53□□□□□ -0.72
NPAS3-213ENST00000552874 WDR17Q8IZU2 1322 aa10.53□□□□□ -0.72
NPAS3-213ENST00000552874 VPS72Q15906 364 aa10.52□□□□□ -0.73
NPAS3-213ENST00000552874 IP6K1Q92551 441 aa10.52□□□□□ -0.73
NPAS3-213ENST00000552874 DOT1LQ8TEK3 1739 aa10.52□□□□□ -0.73
NPAS3-213ENST00000552874 MEGF6O75095 1541 aa10.52□□□□□ -0.73
NPAS3-213ENST00000552874 ITGB4P16144 1822 aa10.51□□□□□ -0.73
NPAS3-213ENST00000552874 HAP1P54257 671 aaPredicted RBP10.51□□□□□ -0.73
NPAS3-213ENST00000552874 CC2D1BQ5T0F9 858 aaKnown RBP10.51□□□□□ -0.73
NPAS3-213ENST00000552874 NGLY1Q96IV0 654 aa10.51□□□□□ -0.73
NPAS3-213ENST00000552874 USP21Q9UK80 565 aa10.51□□□□□ -0.73
NPAS3-213ENST00000552874 SPATA31A1Q5TZJ5 1347 aa10.51□□□□□ -0.73
NPAS3-213ENST00000552874 ZNF772Q68DY9 489 aaPredicted RBP10.5□□□□□ -0.73
NPAS3-213ENST00000552874 LARP1Q6PKG0 1096 aaKnown RBP10.5□□□□□ -0.73
NPAS3-213ENST00000552874 RBM42Q9BTD8 480 aaKnown RBP10.5□□□□□ -0.73
NPAS3-213ENST00000552874 NHSQ6T4R5 1651 aa10.5□□□□□ -0.73
NPAS3-213ENST00000552874 TNS2Q63HR2 1409 aa10.5□□□□□ -0.73
NPAS3-213ENST00000552874 SIPA1L3O60292 1781 aaPredicted RBP10.49□□□□□ -0.73
NPAS3-213ENST00000552874 SCN11AQ9UI33 1791 aa10.49□□□□□ -0.73
NPAS3-213ENST00000552874 HSP90AB2PQ58FF8 381 aa10.49□□□□□ -0.73
NPAS3-213ENST00000552874 MORC1Q86VD1 984 aa10.49□□□□□ -0.73
NPAS3-213ENST00000552874 TRPC5Q9UL62 973 aaPredicted RBP10.49□□□□□ -0.73
NPAS3-213ENST00000552874 RGPD3A6NKT7 1758 aaPredicted RBP10.49□□□□□ -0.73
NPAS3-213ENST00000552874 RGPD4Q7Z3J3 1758 aa10.49□□□□□ -0.73
NPAS3-213ENST00000552874 POTEHQ6S545 545 aa10.48□□□□□ -0.73
NPAS3-213ENST00000552874 ANKRD24Q8TF21 1146 aa10.48□□□□□ -0.73
NPAS3-213ENST00000552874 KDRP35968 1356 aa10.48□□□□□ -0.73
NPAS3-213ENST00000552874 OVOS2A0A0G2JMS6 1433 aa10.48□□□□□ -0.73
NPAS3-213ENST00000552874 ONECUT3O60422 494 aaPredicted RBP10.47□□□□□ -0.73
NPAS3-213ENST00000552874 ATXN8OSP0DMR3 200 aa10.47□□□□□ -0.73
NPAS3-213ENST00000552874 PPP2R1AP30153 589 aa10.47□□□□□ -0.73
NPAS3-213ENST00000552874 TNNT2P45379 298 aaPredicted RBP10.47□□□□□ -0.73
NPAS3-213ENST00000552874 GJD4Q96KN9 370 aaPredicted RBP10.47□□□□□ -0.73
NPAS3-213ENST00000552874 IGSF1Q8N6C5 1336 aa10.47□□□□□ -0.73
NPAS3-213ENST00000552874 PLEKHG2Q9H7P9 1386 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms