RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 NGEFQ8N5V2 710 aa14.96□□□□□ -0.01
CACNB3-224ENST00000552812 ZNF335Q9H4Z2 1342 aaPredicted RBP14.96□□□□□ -0.02
CACNB3-224ENST00000552812 DIAPH1O60610 1272 aaKnown RBP14.95□□□□□ -0.02
CACNB3-224ENST00000552812 PDE3BQ13370 1112 aa14.95□□□□□ -0.02
CACNB3-224ENST00000552812 ORAI2Q96SN7 254 aa14.95□□□□□ -0.02
CACNB3-224ENST00000552812 PSME1Q06323 249 aa14.94□□□□□ -0.02
CACNB3-224ENST00000552812 MARF1Q9Y4F3 1742 aaKnown RBP14.94□□□□□ -0.02
CACNB3-224ENST00000552812 EMILIN1Q9Y6C2 1016 aa14.93□□□□□ -0.02
CACNB3-224ENST00000552812 ABTB2Q8N961 1025 aa14.92□□□□□ -0.02
CACNB3-224ENST00000552812 PPM1GO15355 546 aaPredicted RBP14.92□□□□□ -0.02
CACNB3-224ENST00000552812 U2AF1L5P0DN76 240 aaPredicted RBP14.92□□□□□ -0.02
CACNB3-224ENST00000552812 FBLN1P23142 703 aa14.92□□□□□ -0.02
CACNB3-224ENST00000552812 NLRP6P59044 892 aa14.92□□□□□ -0.02
CACNB3-224ENST00000552812 U2AF1Q01081 240 aaKnown RBP eCLIP14.92□□□□□ -0.02
CACNB3-224ENST00000552812 RUNDC1Q96C34 613 aa14.92□□□□□ -0.02
CACNB3-224ENST00000552812 TRPM3Q9HCF6 1732 aaPredicted RBP14.91□□□□□ -0.02
CACNB3-224ENST00000552812 FOXO3O43524 673 aa14.91□□□□□ -0.02
CACNB3-224ENST00000552812 PAK3O75914 559 aaPredicted RBP14.91□□□□□ -0.02
CACNB3-224ENST00000552812 RRS1Q15050 365 aaKnown RBP14.91□□□□□ -0.02
CACNB3-224ENST00000552812 CCDC146Q8IYE0 955 aa14.91□□□□□ -0.02
CACNB3-224ENST00000552812 OTUD5Q96G74 571 aa14.91□□□□□ -0.02
CACNB3-224ENST00000552812 CREBZFQ9NS37 354 aa14.91□□□□□ -0.02
CACNB3-224ENST00000552812 KIF24Q5T7B8 1368 aa14.91□□□□□ -0.02
CACNB3-224ENST00000552812 GTF3C3Q9Y5Q9 886 aa14.9□□□□□ -0.02
CACNB3-224ENST00000552812 IQSEC2Q5JU85 1478 aa14.9□□□□□ -0.02
CACNB3-224ENST00000552812 APAF1O14727 1248 aa14.89□□□□□ -0.03
CACNB3-224ENST00000552812 GALR2O43603 387 aaPredicted RBP14.89□□□□□ -0.03
CACNB3-224ENST00000552812 PNNQ9H307 717 aaKnown RBP14.89□□□□□ -0.03
CACNB3-224ENST00000552812 ZNF521Q96K83 1311 aa14.89□□□□□ -0.03
CACNB3-224ENST00000552812 U2SURPO15042 1029 aaKnown RBP14.89□□□□□ -0.03
CACNB3-224ENST00000552812 PEAK1Q9H792 1746 aa14.88□□□□□ -0.03
CACNB3-224ENST00000552812 SBNO1A3KN83 1393 aa14.88□□□□□ -0.03
CACNB3-224ENST00000552812 NPHP3Q7Z494 1330 aa14.88□□□□□ -0.03
CACNB3-224ENST00000552812 IL13P35225 146 aa14.88□□□□□ -0.03
CACNB3-224ENST00000552812 SALL2Q9Y467 1007 aaPredicted RBP14.88□□□□□ -0.03
CACNB3-224ENST00000552812 FLT4P35916 1363 aa14.87□□□□□ -0.03
CACNB3-224ENST00000552812 MAP3K19Q56UN5 1328 aa14.87□□□□□ -0.03
CACNB3-224ENST00000552812 SENP3-EIF4A1A0A087X0R7 540 aa14.87□□□□□ -0.03
CACNB3-224ENST00000552812 FCHSD2O94868 740 aa14.87□□□□□ -0.03
CACNB3-224ENST00000552812 KRT28Q7Z3Y7 464 aa14.87□□□□□ -0.03
CACNB3-224ENST00000552812 ALS2Q96Q42 1657 aa14.86□□□□□ -0.03
CACNB3-224ENST00000552812 KCNH5Q8NCM2 988 aa14.86□□□□□ -0.03
CACNB3-224ENST00000552812 PLEKHF1Q96S99 279 aa14.86□□□□□ -0.03
CACNB3-224ENST00000552812 RTL1A6NKG5 1358 aa14.85□□□□□ -0.03
CACNB3-224ENST00000552812 SLIT3O75094 1523 aa14.85□□□□□ -0.03
CACNB3-224ENST00000552812 NFAT5O94916 1531 aa14.85□□□□□ -0.03
CACNB3-224ENST00000552812 TCP11L2Q8N4U5 519 aa14.85□□□□□ -0.03
CACNB3-224ENST00000552812 CCDC27Q2M243 656 aa14.84□□□□□ -0.03
CACNB3-224ENST00000552812 NUTM2GQ5VZR2 741 aa14.84□□□□□ -0.03
CACNB3-224ENST00000552812 PHRF1Q9P1Y6 1649 aaKnown RBP14.84□□□□□ -0.03
CACNB3-224ENST00000552812 USP19O94966 1318 aa14.84□□□□□ -0.03
CACNB3-224ENST00000552812 MAPK8IP3Q9UPT6 1336 aa14.84□□□□□ -0.03
CACNB3-224ENST00000552812 SOX12O15370 315 aa14.83□□□□□ -0.03
CACNB3-224ENST00000552812 XPCQ01831 940 aaPredicted RBP14.83□□□□□ -0.03
CACNB3-224ENST00000552812 GOLGA2Q08379 1002 aa14.83□□□□□ -0.03
CACNB3-224ENST00000552812 RSPH6AQ9H0K4 717 aa14.83□□□□□ -0.03
CACNB3-224ENST00000552812 SLAIN2Q9P270 581 aa14.83□□□□□ -0.03
CACNB3-224ENST00000552812 PXDNQ92626 1479 aa14.83□□□□□ -0.04
CACNB3-224ENST00000552812 RGPD1P0DJD0 1748 aa14.83□□□□□ -0.04
CACNB3-224ENST00000552812 AMPHP49418 695 aa14.83□□□□□ -0.04
CACNB3-224ENST00000552812 EIF4A2Q14240 407 aaKnown RBP14.83□□□□□ -0.04
CACNB3-224ENST00000552812 BRINP3Q76B58 766 aa14.83□□□□□ -0.04
CACNB3-224ENST00000552812 NEFMP07197 916 aa14.82□□□□□ -0.04
CACNB3-224ENST00000552812 HSP90AB2PQ58FF8 381 aa14.82□□□□□ -0.04
CACNB3-224ENST00000552812 LTN1O94822 1766 aa14.82□□□□□ -0.04
CACNB3-224ENST00000552812 TNS3Q68CZ2 1445 aa14.81□□□□□ -0.04
CACNB3-224ENST00000552812 POTEB2H3BUK9 544 aa14.81□□□□□ -0.04
CACNB3-224ENST00000552812 WWC1Q8IX03 1113 aa14.81□□□□□ -0.04
CACNB3-224ENST00000552812 CDCA7LQ96GN5 454 aa14.81□□□□□ -0.04
CACNB3-224ENST00000552812 LTBP4Q8N2S1 1624 aa14.81□□□□□ -0.04
CACNB3-224ENST00000552812 HOXC9P31274 260 aa14.8□□□□□ -0.04
CACNB3-224ENST00000552812 PRKAR2BP31323 418 aa14.8□□□□□ -0.04
CACNB3-224ENST00000552812 SUPT16HQ9Y5B9 1047 aaKnown RBP14.8□□□□□ -0.04
CACNB3-224ENST00000552812 ARHGEF10O15013 1369 aa14.8□□□□□ -0.04
CACNB3-224ENST00000552812 GCP02774 474 aa14.79□□□□□ -0.04
CACNB3-224ENST00000552812 NEFLP07196 543 aa14.79□□□□□ -0.04
CACNB3-224ENST00000552812 TMPOP42166 694 aaKnown RBP14.79□□□□□ -0.04
CACNB3-224ENST00000552812 E9PSI1 815 aa14.78□□□□□ -0.04
CACNB3-224ENST00000552812 HMOX1P09601 288 aa14.78□□□□□ -0.04
CACNB3-224ENST00000552812 SLFN5Q08AF3 891 aa14.78□□□□□ -0.04
CACNB3-224ENST00000552812 LMOD2Q6P5Q4 547 aa14.78□□□□□ -0.04
CACNB3-224ENST00000552812 WDR63Q8IWG1 891 aa14.78□□□□□ -0.04
CACNB3-224ENST00000552812 SPATA31A3Q5VYP0 1347 aa14.78□□□□□ -0.04
CACNB3-224ENST00000552812 MED1Q15648 1581 aaPredicted RBP14.78□□□□□ -0.04
CACNB3-224ENST00000552812 POTEMA6NI47 508 aa14.78□□□□□ -0.04
CACNB3-224ENST00000552812 DUSP27Q5VZP5 1158 aa14.78□□□□□ -0.04
CACNB3-224ENST00000552812 TRMT2AQ8IZ69 625 aaKnown RBP14.78□□□□□ -0.04
CACNB3-224ENST00000552812 IP6K1Q92551 441 aa14.78□□□□□ -0.04
CACNB3-224ENST00000552812 RRP7AQ9Y3A4 280 aaKnown RBP14.78□□□□□ -0.04
CACNB3-224ENST00000552812 SOS2Q07890 1332 aaPredicted RBP14.77□□□□□ -0.04
CACNB3-224ENST00000552812 NHSL1Q5SYE7 1610 aa14.77□□□□□ -0.04
CACNB3-224ENST00000552812 NEUROD2Q15784 382 aa14.77□□□□□ -0.05
CACNB3-224ENST00000552812 DDX17Q92841 729 aaKnown RBP14.77□□□□□ -0.05
CACNB3-224ENST00000552812 IGSF1Q8N6C5 1336 aa14.77□□□□□ -0.05
CACNB3-224ENST00000552812 KDRP35968 1356 aa14.76□□□□□ -0.05
CACNB3-224ENST00000552812 ARHGEF25Q86VW2 580 aa14.76□□□□□ -0.05
CACNB3-224ENST00000552812 RNF123Q5XPI4 1314 aa14.75□□□□□ -0.05
CACNB3-224ENST00000552812 CRYBG1Q9Y4K1 1723 aa14.75□□□□□ -0.05
CACNB3-224ENST00000552812 SULT6B1Q6IMI4 303 aa14.75□□□□□ -0.05
CACNB3-224ENST00000552812 ABCC6O95255 1503 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms