RNA–Protein interactions for RNA: ENST00000552744.5

SYT1-212, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-212ENST00000552744 ATAD2Q6PL18 1390 aa9.69□□□□□ -0.86
SYT1-212ENST00000552744 ZBTB7BO15156 539 aaPredicted RBP9.69□□□□□ -0.86
SYT1-212ENST00000552744 RRP9O43818 475 aaKnown RBP9.69□□□□□ -0.86
SYT1-212ENST00000552744 TPRNQ4KMQ1 711 aa9.69□□□□□ -0.86
SYT1-212ENST00000552744 FOXD4L5Q5VV16 416 aaPredicted RBP9.69□□□□□ -0.86
SYT1-212ENST00000552744 KIAA1211Q6ZU35 1233 aa9.69□□□□□ -0.86
SYT1-212ENST00000552744 FOXD4L4Q8WXT5 416 aaPredicted RBP9.69□□□□□ -0.86
SYT1-212ENST00000552744 PKNOX2Q96KN3 472 aa9.69□□□□□ -0.86
SYT1-212ENST00000552744 CAVIN1Q6NZI2 390 aaKnown RBP9.68□□□□□ -0.86
SYT1-212ENST00000552744 ABCC11Q96J66 1382 aa9.68□□□□□ -0.86
SYT1-212ENST00000552744 FRMPD1Q5SYB0 1578 aa9.68□□□□□ -0.86
SYT1-212ENST00000552744 BAG4O95429 457 aaKnown RBP9.68□□□□□ -0.86
SYT1-212ENST00000552744 MSNP26038 577 aaKnown RBP9.68□□□□□ -0.86
SYT1-212ENST00000552744 PKP1Q13835 747 aa9.68□□□□□ -0.86
SYT1-212ENST00000552744 C16orf71Q8IYS4 520 aaPredicted RBP9.68□□□□□ -0.86
SYT1-212ENST00000552744 ISY1Q9ULR0 285 aaKnown RBP9.68□□□□□ -0.86
SYT1-212ENST00000552744 NCOA3Q9Y6Q9 1424 aa9.67□□□□□ -0.86
SYT1-212ENST00000552744 ZBTB7CA1YPR0 619 aa9.67□□□□□ -0.86
SYT1-212ENST00000552744 SIRT2Q8IXJ6 389 aa9.67□□□□□ -0.86
SYT1-212ENST00000552744 CHAMP1Q96JM3 812 aa9.67□□□□□ -0.86
SYT1-212ENST00000552744 PHACTR3Q96KR7 559 aa9.67□□□□□ -0.86
SYT1-212ENST00000552744 ARID3AQ99856 593 aa9.67□□□□□ -0.86
SYT1-212ENST00000552744 PPIP5K1Q6PFW1 1433 aa9.67□□□□□ -0.86
SYT1-212ENST00000552744 DEPDC5O75140 1603 aa9.67□□□□□ -0.86
SYT1-212ENST00000552744 RBM10P98175 930 aaKnown RBP9.67□□□□□ -0.86
SYT1-212ENST00000552744 GCC1Q96CN9 775 aa9.67□□□□□ -0.86
SYT1-212ENST00000552744 TERF2IPQ9NYB0 399 aa9.67□□□□□ -0.86
SYT1-212ENST00000552744 VGFO15240 615 aaPredicted RBP9.66□□□□□ -0.86
SYT1-212ENST00000552744 CALD1Q05682 793 aaKnown RBP9.66□□□□□ -0.86
SYT1-212ENST00000552744 PRAM1Q96QH2 718 aa9.66□□□□□ -0.86
SYT1-212ENST00000552744 REREQ9P2R6 1566 aa9.66□□□□□ -0.86
SYT1-212ENST00000552744 CDC45O75419 566 aa9.66□□□□□ -0.86
SYT1-212ENST00000552744 CCDC173Q0VFZ6 552 aa9.66□□□□□ -0.86
SYT1-212ENST00000552744 ALDH1L2Q3SY69 923 aa9.66□□□□□ -0.86
SYT1-212ENST00000552744 PROM2Q8N271 834 aa9.66□□□□□ -0.86
SYT1-212ENST00000552744 CABP1Q9NZU7 370 aa9.66□□□□□ -0.86
SYT1-212ENST00000552744 VAMP4O75379 141 aa9.65□□□□□ -0.86
SYT1-212ENST00000552744 EFCAB6Q5THR3 1501 aa9.65□□□□□ -0.86
SYT1-212ENST00000552744 NPATQ14207 1427 aa9.65□□□□□ -0.86
SYT1-212ENST00000552744 NSD2O96028 1365 aa9.65□□□□□ -0.86
SYT1-212ENST00000552744 IL16Q14005 1332 aa9.65□□□□□ -0.86
SYT1-212ENST00000552744 PRPF40AO75400 957 aaKnown RBP9.65□□□□□ -0.86
SYT1-212ENST00000552744 GSPT1P15170 499 aaKnown RBP9.65□□□□□ -0.86
SYT1-212ENST00000552744 DCTN1Q14203 1278 aa9.65□□□□□ -0.86
SYT1-212ENST00000552744 HECW2Q9P2P5 1572 aa9.65□□□□□ -0.87
SYT1-212ENST00000552744 MYO3AQ8NEV4 1616 aa9.64□□□□□ -0.87
SYT1-212ENST00000552744 KLHL40Q2TBA0 621 aa9.64□□□□□ -0.87
SYT1-212ENST00000552744 ZSCAN30Q86W11 494 aa9.64□□□□□ -0.87
SYT1-212ENST00000552744 MRPL50Q8N5N7 158 aaKnown RBP9.64□□□□□ -0.87
SYT1-212ENST00000552744 OTUD7AQ8TE49 926 aaPredicted RBP9.64□□□□□ -0.87
SYT1-212ENST00000552744 RBM27Q9P2N5 1060 aaKnown RBP9.64□□□□□ -0.87
SYT1-212ENST00000552744 NRXN1Q9ULB1 1477 aa9.64□□□□□ -0.87
SYT1-212ENST00000552744 VWDEQ8N2E2 1590 aa9.64□□□□□ -0.87
SYT1-212ENST00000552744 TULP4Q9NRJ4 1543 aa9.64□□□□□ -0.87
SYT1-212ENST00000552744 FAM83GA6ND36 823 aa9.64□□□□□ -0.87
SYT1-212ENST00000552744 TWISTNBQ3B726 338 aaPredicted RBP9.64□□□□□ -0.87
SYT1-212ENST00000552744 HDGFL2Q7Z4V5 671 aaPredicted RBP9.64□□□□□ -0.87
SYT1-212ENST00000552744 ZGPATQ8N5A5 531 aaKnown RBP9.64□□□□□ -0.87
SYT1-212ENST00000552744 ADGRB1O14514 1584 aa9.64□□□□□ -0.87
SYT1-212ENST00000552744 KDM4FA0A1W2PPD8 638 aa9.63□□□□□ -0.87
SYT1-212ENST00000552744 SMARCA5O60264 1052 aaPredicted RBP9.63□□□□□ -0.87
SYT1-212ENST00000552744 FCHSD2O94868 740 aa9.63□□□□□ -0.87
SYT1-212ENST00000552744 PTMSP20962 102 aa9.63□□□□□ -0.87
SYT1-212ENST00000552744 MBIPQ9NS73 344 aa9.63□□□□□ -0.87
SYT1-212ENST00000552744 R3HCC1Q9Y3T6 440 aaKnown RBP9.63□□□□□ -0.87
SYT1-212ENST00000552744 MROH1Q8NDA8 1641 aa9.63□□□□□ -0.87
SYT1-212ENST00000552744 ADGRB2O60241 1585 aa9.63□□□□□ -0.87
SYT1-212ENST00000552744 ZSCAN23Q3MJ62 389 aa9.63□□□□□ -0.87
SYT1-212ENST00000552744 FOXD4L6Q3SYB3 417 aaPredicted RBP9.63□□□□□ -0.87
SYT1-212ENST00000552744 FOXD4L3Q6VB84 417 aaPredicted RBP9.63□□□□□ -0.87
SYT1-212ENST00000552744 C8orf58Q8NAV2 365 aa9.63□□□□□ -0.87
SYT1-212ENST00000552744 IFT172Q9UG01 1749 aa9.63□□□□□ -0.87
SYT1-212ENST00000552744 XPCQ01831 940 aaPredicted RBP9.62□□□□□ -0.87
SYT1-212ENST00000552744 IDI1Q13907 227 aa9.62□□□□□ -0.87
SYT1-212ENST00000552744 NOL8Q76FK4 1167 aaKnown RBP9.62□□□□□ -0.87
SYT1-212ENST00000552744 PLEKHM2Q8IWE5 1019 aa9.62□□□□□ -0.87
SYT1-212ENST00000552744 FAM13BQ9NYF5 915 aa9.62□□□□□ -0.87
SYT1-212ENST00000552744 SETBP1Q9Y6X0 1596 aa9.62□□□□□ -0.87
SYT1-212ENST00000552744 PRIM1P49642 420 aaKnown RBP9.62□□□□□ -0.87
SYT1-212ENST00000552744 RNF214Q8ND24 703 aa9.62□□□□□ -0.87
SYT1-212ENST00000552744 RBSNQ9H1K0 784 aa9.62□□□□□ -0.87
SYT1-212ENST00000552744 CHMP4BQ9H444 224 aaKnown RBP9.62□□□□□ -0.87
SYT1-212ENST00000552744 EMILIN1Q9Y6C2 1016 aa9.62□□□□□ -0.87
SYT1-212ENST00000552744 ADGRB3O60242 1522 aa9.62□□□□□ -0.87
SYT1-212ENST00000552744 INO80Q9ULG1 1556 aaPredicted RBP9.62□□□□□ -0.87
SYT1-212ENST00000552744 KRT24Q2M2I5 525 aa9.62□□□□□ -0.87
SYT1-212ENST00000552744 CDK19Q9BWU1 502 aa9.62□□□□□ -0.87
SYT1-212ENST00000552744 POLKQ9UBT6 870 aa9.62□□□□□ -0.87
SYT1-212ENST00000552744 TPM2P07951 284 aa9.61□□□□□ -0.87
SYT1-212ENST00000552744 RABEP1Q15276 862 aa9.61□□□□□ -0.87
SYT1-212ENST00000552744 NFE2L2Q16236 605 aa9.61□□□□□ -0.87
SYT1-212ENST00000552744 PPP1R9BQ96SB3 815 aa9.61□□□□□ -0.87
SYT1-212ENST00000552744 RPGRIP1LQ68CZ1 1315 aa9.61□□□□□ -0.87
SYT1-212ENST00000552744 GNAI1P63096 354 aa9.61□□□□□ -0.87
SYT1-212ENST00000552744 NUCB2P80303 420 aa9.61□□□□□ -0.87
SYT1-212ENST00000552744 MPNDQ8N594 471 aa9.61□□□□□ -0.87
SYT1-212ENST00000552744 LMBRD1Q9NUN5 540 aa9.61□□□□□ -0.87
SYT1-212ENST00000552744 ZC3H13Q5T200 1668 aaKnown RBP9.6□□□□□ -0.87
SYT1-212ENST00000552744 SYCE3A1L190 88 aa9.6□□□□□ -0.87
SYT1-212ENST00000552744 RAPGEF3O95398 923 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms