RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 BRWD3Q6RI45 1802 aa8.31□□□□□ -1.08
HOXB3-213ENST00000552000 BLMP54132 1417 aaPredicted RBP8.3□□□□□ -1.08
HOXB3-213ENST00000552000 MYOM2P54296 1465 aa8.3□□□□□ -1.08
HOXB3-213ENST00000552000 IQGAP3Q86VI3 1631 aa8.29□□□□□ -1.08
HOXB3-213ENST00000552000 MARF1Q9Y4F3 1742 aaKnown RBP8.29□□□□□ -1.08
HOXB3-213ENST00000552000 STK25O00506 426 aa8.29□□□□□ -1.08
HOXB3-213ENST00000552000 XPCQ01831 940 aaPredicted RBP8.29□□□□□ -1.08
HOXB3-213ENST00000552000 SF3B2Q13435 895 aaKnown RBP8.29□□□□□ -1.08
HOXB3-213ENST00000552000 NUP155O75694 1391 aa8.29□□□□□ -1.08
HOXB3-213ENST00000552000 LRP5O75197 1615 aa8.29□□□□□ -1.08
HOXB3-213ENST00000552000 COL22A1Q8NFW1 1626 aaPredicted RBP8.29□□□□□ -1.08
HOXB3-213ENST00000552000 RALGAPBQ86X10 1494 aa8.28□□□□□ -1.08
HOXB3-213ENST00000552000 ROBO2Q9HCK4 1378 aa8.28□□□□□ -1.08
HOXB3-213ENST00000552000 TK2O00142 265 aa8.28□□□□□ -1.08
HOXB3-213ENST00000552000 GLI3P10071 1580 aa8.27□□□□□ -1.09
HOXB3-213ENST00000552000 SPHKAPQ2M3C7 1700 aa8.27□□□□□ -1.09
HOXB3-213ENST00000552000 ESCO1Q5FWF5 840 aa8.27□□□□□ -1.09
HOXB3-213ENST00000552000 UNC5CLQ8IV45 518 aa8.27□□□□□ -1.09
HOXB3-213ENST00000552000 KCTD12Q96CX2 325 aaKnown RBP8.27□□□□□ -1.09
HOXB3-213ENST00000552000 NPHP3Q7Z494 1330 aa8.27□□□□□ -1.09
HOXB3-213ENST00000552000 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.26□□□□□ -1.09
HOXB3-213ENST00000552000 FOXO3O43524 673 aa8.26□□□□□ -1.09
HOXB3-213ENST00000552000 HRCP23327 699 aa8.26□□□□□ -1.09
HOXB3-213ENST00000552000 SEPT12Q8IYM1 358 aa8.26□□□□□ -1.09
HOXB3-213ENST00000552000 PXDNQ92626 1479 aa8.26□□□□□ -1.09
HOXB3-213ENST00000552000 NEXMIFQ5QGS0 1516 aa8.25□□□□□ -1.09
HOXB3-213ENST00000552000 SLIT2O94813 1529 aa8.24□□□□□ -1.09
HOXB3-213ENST00000552000 NUTM2FA1L443 756 aa8.24□□□□□ -1.09
HOXB3-213ENST00000552000 KIF1BO60333 1816 aa8.24□□□□□ -1.09
HOXB3-213ENST00000552000 HFM1A2PYH4 1435 aa8.23□□□□□ -1.09
HOXB3-213ENST00000552000 CLTCL1P53675 1640 aa8.23□□□□□ -1.09
HOXB3-213ENST00000552000 HRO43593 1189 aa8.23□□□□□ -1.09
HOXB3-213ENST00000552000 BAG6P46379 1132 aa8.23□□□□□ -1.09
HOXB3-213ENST00000552000 PSEN2P49810 448 aa8.23□□□□□ -1.09
HOXB3-213ENST00000552000 PPP4R3BQ5MIZ7 849 aa8.23□□□□□ -1.09
HOXB3-213ENST00000552000 DMRTA1Q5VZB9 504 aa8.23□□□□□ -1.09
HOXB3-213ENST00000552000 KRT27Q7Z3Y8 459 aa8.23□□□□□ -1.09
HOXB3-213ENST00000552000 CCDC9Q9Y3X0 531 aaKnown RBP8.23□□□□□ -1.09
HOXB3-213ENST00000552000 ROCK1Q13464 1354 aa8.22□□□□□ -1.09
HOXB3-213ENST00000552000 A0A0G2JS52 829 aa8.22□□□□□ -1.09
HOXB3-213ENST00000552000 ITGAEP38570 1179 aa8.22□□□□□ -1.09
HOXB3-213ENST00000552000 MYT1Q01538 1121 aa8.22□□□□□ -1.09
HOXB3-213ENST00000552000 HAP1P54257 671 aaPredicted RBP8.21□□□□□ -1.1
HOXB3-213ENST00000552000 EN1Q05925 392 aaPredicted RBP8.21□□□□□ -1.1
HOXB3-213ENST00000552000 R3HDM1Q15032 1099 aaKnown RBP8.21□□□□□ -1.1
HOXB3-213ENST00000552000 VPS72Q15906 364 aa8.21□□□□□ -1.1
HOXB3-213ENST00000552000 CDC42BPGQ6DT37 1551 aa8.21□□□□□ -1.1
HOXB3-213ENST00000552000 SPATA31A3Q5VYP0 1347 aa8.21□□□□□ -1.1
HOXB3-213ENST00000552000 USP32Q8NFA0 1604 aa8.21□□□□□ -1.1
HOXB3-213ENST00000552000 LRPPRCP42704 1394 aaKnown RBP8.21□□□□□ -1.1
HOXB3-213ENST00000552000 NAIPQ13075 1403 aa8.2□□□□□ -1.1
HOXB3-213ENST00000552000 PRAG1Q86YV5 1406 aa8.2□□□□□ -1.1
HOXB3-213ENST00000552000 CABLES1Q8TDN4 633 aa8.2□□□□□ -1.1
HOXB3-213ENST00000552000 PLCH1Q4KWH8 1693 aa8.19□□□□□ -1.1
HOXB3-213ENST00000552000 ONECUT3O60422 494 aaPredicted RBP8.19□□□□□ -1.1
HOXB3-213ENST00000552000 YY1P25490 414 aa8.19□□□□□ -1.1
HOXB3-213ENST00000552000 PTPN5P54829 565 aa8.19□□□□□ -1.1
HOXB3-213ENST00000552000 KRT28Q7Z3Y7 464 aa8.19□□□□□ -1.1
HOXB3-213ENST00000552000 WAPLQ7Z5K2 1190 aa8.19□□□□□ -1.1
HOXB3-213ENST00000552000 STK26Q9P289 416 aa8.19□□□□□ -1.1
HOXB3-213ENST00000552000 NWD2Q9ULI1 1742 aa8.18□□□□□ -1.1
HOXB3-213ENST00000552000 TBC1D12O60347 775 aa8.18□□□□□ -1.1
HOXB3-213ENST00000552000 FAM98CQ17RN3 349 aaKnown RBP8.18□□□□□ -1.1
HOXB3-213ENST00000552000 FAM182BQ5T319 152 aa8.18□□□□□ -1.1
HOXB3-213ENST00000552000 PTCD2Q8WV60 388 aaKnown RBP8.18□□□□□ -1.1
HOXB3-213ENST00000552000 KCNK17Q96T54 332 aa8.18□□□□□ -1.1
HOXB3-213ENST00000552000 CCDC144AA2RUR9 1427 aa8.18□□□□□ -1.1
HOXB3-213ENST00000552000 RGS20O76081 388 aa8.17□□□□□ -1.1
HOXB3-213ENST00000552000 ECM2O94769 699 aaPredicted RBP8.17□□□□□ -1.1
HOXB3-213ENST00000552000 LMOD2Q6P5Q4 547 aa8.17□□□□□ -1.1
HOXB3-213ENST00000552000 IRX2Q9BZI1 471 aaPredicted RBP8.17□□□□□ -1.1
HOXB3-213ENST00000552000 RPGRIP1LQ68CZ1 1315 aa8.17□□□□□ -1.1
HOXB3-213ENST00000552000 TNS3Q68CZ2 1445 aa8.17□□□□□ -1.1
HOXB3-213ENST00000552000 RGPD8O14715 1765 aaPredicted RBP8.17□□□□□ -1.1
HOXB3-213ENST00000552000 PPLO60437 1756 aa8.17□□□□□ -1.1
HOXB3-213ENST00000552000 FAM83GA6ND36 823 aa8.16□□□□□ -1.1
HOXB3-213ENST00000552000 RGPD1P0DJD0 1748 aa8.16□□□□□ -1.1
HOXB3-213ENST00000552000 KIF1AQ12756 1690 aa8.16□□□□□ -1.1
HOXB3-213ENST00000552000 PLEKHH1Q9ULM0 1364 aa8.16□□□□□ -1.1
HOXB3-213ENST00000552000 FMN2Q9NZ56 1722 aa8.15□□□□□ -1.1
HOXB3-213ENST00000552000 PSME1Q06323 249 aa8.15□□□□□ -1.1
HOXB3-213ENST00000552000 EZH2Q15910 746 aaKnown RBP8.15□□□□□ -1.1
HOXB3-213ENST00000552000 ABCA3Q99758 1704 aa8.15□□□□□ -1.11
HOXB3-213ENST00000552000 ADGRF5Q8IZF2 1346 aa8.14□□□□□ -1.11
HOXB3-213ENST00000552000 TMEM132EQ6IEE7 984 aa8.14□□□□□ -1.11
HOXB3-213ENST00000552000 PLPP6Q8IY26 295 aa8.14□□□□□ -1.11
HOXB3-213ENST00000552000 RTN4Q9NQC3 1192 aaKnown RBP8.14□□□□□ -1.11
HOXB3-213ENST00000552000 BTG4Q9NY30 223 aa8.14□□□□□ -1.11
HOXB3-213ENST00000552000 TNS1Q9HBL0 1735 aaKnown RBP8.14□□□□□ -1.11
HOXB3-213ENST00000552000 DISP2A7MBM2 1401 aa8.13□□□□□ -1.11
HOXB3-213ENST00000552000 TECPR2O15040 1411 aa8.13□□□□□ -1.11
HOXB3-213ENST00000552000 NRAPQ86VF7 1730 aa8.13□□□□□ -1.11
HOXB3-213ENST00000552000 UTRNP46939 3433 aa8.13□□□□□ -1.11
HOXB3-213ENST00000552000 FOXK1P85037 733 aa8.13□□□□□ -1.11
HOXB3-213ENST00000552000 AMER1Q5JTC6 1135 aaPredicted RBP8.13□□□□□ -1.11
HOXB3-213ENST00000552000 CEP350Q5VT06 3117 aa8.13□□□□□ -1.11
HOXB3-213ENST00000552000 SBNO1A3KN83 1393 aa8.12□□□□□ -1.11
HOXB3-213ENST00000552000 ARHGEF10O15013 1369 aa8.12□□□□□ -1.11
HOXB3-213ENST00000552000 ABCC11Q96J66 1382 aa8.12□□□□□ -1.11
HOXB3-213ENST00000552000 GOLGA8CPA6NN73 597 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms