RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 ATF3P18847 181 aa25.72■■□□□ 1.71
SSH1-209ENST00000551165 AMPHP49418 695 aa25.72■■□□□ 1.71
SSH1-209ENST00000551165 SULT6B1Q6IMI4 303 aa25.72■■□□□ 1.71
SSH1-209ENST00000551165 USP54Q70EL1 1684 aa25.72■■□□□ 1.71
SSH1-209ENST00000551165 MST1RQ04912 1400 aa25.71■■□□□ 1.71
SSH1-209ENST00000551165 C20orf194Q5TEA3 1177 aa25.71■■□□□ 1.71
SSH1-209ENST00000551165 EXOC6Q8TAG9 804 aa25.71■■□□□ 1.71
SSH1-209ENST00000551165 DDX17Q92841 729 aaKnown RBP25.71■■□□□ 1.71
SSH1-209ENST00000551165 BCAR3O75815 825 aa25.7■■□□□ 1.71
SSH1-209ENST00000551165 FLT4P35916 1363 aa25.7■■□□□ 1.7
SSH1-209ENST00000551165 ZNF335Q9H4Z2 1342 aaPredicted RBP25.7■■□□□ 1.7
SSH1-209ENST00000551165 TSR2Q969E8 191 aaKnown RBP25.69■■□□□ 1.7
SSH1-209ENST00000551165 NFE2L2Q16236 605 aa25.68■■□□□ 1.7
SSH1-209ENST00000551165 XIRP1Q702N8 1843 aaKnown RBP25.68■■□□□ 1.7
SSH1-209ENST00000551165 RGPD1P0DJD0 1748 aa25.67■■□□□ 1.7
SSH1-209ENST00000551165 KRT28Q7Z3Y7 464 aa25.67■■□□□ 1.7
SSH1-209ENST00000551165 THUMPD2Q9BTF0 503 aaKnown RBP25.67■■□□□ 1.7
SSH1-209ENST00000551165 NEFMP07197 916 aa25.67■■□□□ 1.7
SSH1-209ENST00000551165 HOXC9P31274 260 aa25.67■■□□□ 1.7
SSH1-209ENST00000551165 LMOD2Q6P5Q4 547 aa25.66■■□□□ 1.7
SSH1-209ENST00000551165 NCOA3Q9Y6Q9 1424 aa25.65■■□□□ 1.7
SSH1-209ENST00000551165 FANCIQ9NVI1 1328 aa25.64■■□□□ 1.7
SSH1-209ENST00000551165 TRPM3Q9HCF6 1732 aaPredicted RBP25.64■■□□□ 1.69
SSH1-209ENST00000551165 EYA1Q99502 592 aa25.63■■□□□ 1.69
SSH1-209ENST00000551165 MYH16Q9H6N6 1097 aa25.63■■□□□ 1.69
SSH1-209ENST00000551165 NFAT5O94916 1531 aa25.63■■□□□ 1.69
SSH1-209ENST00000551165 DCCP43146 1447 aa25.63■■□□□ 1.69
SSH1-209ENST00000551165 LTV1Q96GA3 475 aaPredicted RBP25.62■■□□□ 1.69
SSH1-209ENST00000551165 CRBNQ96SW2 442 aa25.62■■□□□ 1.69
SSH1-209ENST00000551165 CADPS2Q86UW7 1296 aa25.62■■□□□ 1.69
SSH1-209ENST00000551165 KIF1AQ12756 1690 aa25.62■■□□□ 1.69
SSH1-209ENST00000551165 FAM83GA6ND36 823 aa25.61■■□□□ 1.69
SSH1-209ENST00000551165 MSH6P52701 1360 aa25.61■■□□□ 1.69
SSH1-209ENST00000551165 DLG5Q8TDM6 1919 aa25.61■■□□□ 1.69
SSH1-209ENST00000551165 LTN1O94822 1766 aa25.61■■□□□ 1.69
SSH1-209ENST00000551165 ZBTB7CA1YPR0 619 aa25.61■■□□□ 1.69
SSH1-209ENST00000551165 EXOSC9Q06265 439 aaKnown RBP25.59■■□□□ 1.69
SSH1-209ENST00000551165 DCTN1Q14203 1278 aa25.59■■□□□ 1.69
SSH1-209ENST00000551165 ARHGEF10O15013 1369 aa25.59■■□□□ 1.69
SSH1-209ENST00000551165 IL16Q14005 1332 aa25.59■■□□□ 1.69
SSH1-209ENST00000551165 GCP02774 474 aa25.58■■□□□ 1.69
SSH1-209ENST00000551165 RARSP54136 660 aaKnown RBP25.58■■□□□ 1.69
SSH1-209ENST00000551165 IGSF1Q8N6C5 1336 aa25.58■■□□□ 1.68
SSH1-209ENST00000551165 BCL2L13Q9BXK5 485 aa25.58■■□□□ 1.68
SSH1-209ENST00000551165 LAS1LQ9Y4W2 734 aaKnown RBP25.58■■□□□ 1.68
SSH1-209ENST00000551165 CCDC136Q96JN2 1154 aa25.56■■□□□ 1.68
SSH1-209ENST00000551165 KIF24Q5T7B8 1368 aa25.56■■□□□ 1.68
SSH1-209ENST00000551165 KCNH5Q8NCM2 988 aa25.55■■□□□ 1.68
SSH1-209ENST00000551165 IP6K1Q92551 441 aa25.55■■□□□ 1.68
SSH1-209ENST00000551165 KDRP35968 1356 aa25.54■■□□□ 1.68
SSH1-209ENST00000551165 SLIT3O75094 1523 aa25.53■■□□□ 1.68
SSH1-209ENST00000551165 USHBP1Q8N6Y0 703 aa25.53■■□□□ 1.68
SSH1-209ENST00000551165 USP19O94966 1318 aa25.53■■□□□ 1.68
SSH1-209ENST00000551165 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.52■■□□□ 1.68
SSH1-209ENST00000551165 ALS2Q96Q42 1657 aa25.52■■□□□ 1.68
SSH1-209ENST00000551165 RTL1A6NKG5 1358 aa25.52■■□□□ 1.68
SSH1-209ENST00000551165 MTHFSDQ2M296 383 aaKnown RBP25.51■■□□□ 1.67
SSH1-209ENST00000551165 ARHGEF25Q86VW2 580 aa25.51■■□□□ 1.67
SSH1-209ENST00000551165 PELP1Q8IZL8 1130 aaKnown RBP25.51■■□□□ 1.67
SSH1-209ENST00000551165 BRINP3Q76B58 766 aa25.51■■□□□ 1.67
SSH1-209ENST00000551165 FRAT1Q92837 279 aaPredicted RBP25.51■■□□□ 1.67
SSH1-209ENST00000551165 MCM10Q7L590 875 aa25.5■■□□□ 1.67
SSH1-209ENST00000551165 TNNQ9UQP3 1299 aa25.49■■□□□ 1.67
SSH1-209ENST00000551165 MED1Q15648 1581 aaPredicted RBP25.49■■□□□ 1.67
SSH1-209ENST00000551165 ZNF853P0CG23 659 aa25.48■■□□□ 1.67
SSH1-209ENST00000551165 NPHP3Q7Z494 1330 aa25.48■■□□□ 1.67
SSH1-209ENST00000551165 CABLES1Q8TDN4 633 aa25.48■■□□□ 1.67
SSH1-209ENST00000551165 LMOD3Q0VAK6 560 aa25.47■■□□□ 1.67
SSH1-209ENST00000551165 NBPF6Q5VWK0 638 aa25.47■■□□□ 1.67
SSH1-209ENST00000551165 NBPF4Q96M43 638 aa25.47■■□□□ 1.67
SSH1-209ENST00000551165 MBIPQ9NS73 344 aa25.47■■□□□ 1.67
SSH1-209ENST00000551165 AXIN2Q9Y2T1 843 aa25.47■■□□□ 1.67
SSH1-209ENST00000551165 ZC3H6P61129 1189 aaKnown RBP25.47■■□□□ 1.67
SSH1-209ENST00000551165 LRRC59Q96AG4 307 aaKnown RBP25.47■■□□□ 1.67
SSH1-209ENST00000551165 SLAIN2Q9P270 581 aa25.47■■□□□ 1.67
SSH1-209ENST00000551165 PXDNQ92626 1479 aa25.47■■□□□ 1.67
SSH1-209ENST00000551165 PANK1Q8TE04 598 aa25.46■■□□□ 1.67
SSH1-209ENST00000551165 IFT57Q9NWB7 429 aa25.46■■□□□ 1.67
SSH1-209ENST00000551165 RGPD2P0DJD1 1756 aa25.45■■□□□ 1.66
SSH1-209ENST00000551165 PHRF1Q9P1Y6 1649 aaKnown RBP25.45■■□□□ 1.66
SSH1-209ENST00000551165 SSH1Q8WYL5 1049 aa25.45■■□□□ 1.66
SSH1-209ENST00000551165 CANXP27824 592 aaKnown RBP25.44■■□□□ 1.66
SSH1-209ENST00000551165 CALD1Q05682 793 aaKnown RBP25.44■■□□□ 1.66
SSH1-209ENST00000551165 TSPYL6Q8N831 410 aa25.44■■□□□ 1.66
SSH1-209ENST00000551165 GNAI1P63096 354 aa25.44■■□□□ 1.66
SSH1-209ENST00000551165 CFAP44Q96MT7 982 aa25.43■■□□□ 1.66
SSH1-209ENST00000551165 ELL2O00472 640 aaPredicted RBP25.42■■□□□ 1.66
SSH1-209ENST00000551165 TNS3Q68CZ2 1445 aa25.42■■□□□ 1.66
SSH1-209ENST00000551165 CT47B1P0C2W7 299 aaPredicted RBP25.41■■□□□ 1.66
SSH1-209ENST00000551165 RLBP1P12271 317 aa25.41■■□□□ 1.66
SSH1-209ENST00000551165 SPATA31A3Q5VYP0 1347 aa25.41■■□□□ 1.66
SSH1-209ENST00000551165 TSHZ2Q9NRE2 1034 aa25.41■■□□□ 1.66
SSH1-209ENST00000551165 SMC4Q9NTJ3 1288 aa25.41■■□□□ 1.66
SSH1-209ENST00000551165 COG6Q9Y2V7 657 aa25.4■■□□□ 1.66
SSH1-209ENST00000551165 CLUAP1Q96AJ1 413 aa25.39■■□□□ 1.66
SSH1-209ENST00000551165 RGPD5Q99666 1765 aa25.39■■□□□ 1.65
SSH1-209ENST00000551165 PDE3AQ14432 1141 aa25.39■■□□□ 1.65
SSH1-209ENST00000551165 C8orf58Q8NAV2 365 aa25.39■■□□□ 1.65
SSH1-209ENST00000551165 ANKRD24Q8TF21 1146 aa25.39■■□□□ 1.65
SSH1-209ENST00000551165 VAMP4O75379 141 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms