RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 U2AF1L5P0DN76 240 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-213ENST00000550831 U2AF1Q01081 240 aaKnown RBP eCLIP12.03□□□□□ -0.481e-6■■□□□ 12.9
TMEM116-213ENST00000550831 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.03□□□□□ -0.48
TMEM116-213ENST00000550831 RGPD8O14715 1765 aaPredicted RBP12.02□□□□□ -0.48
TMEM116-213ENST00000550831 IL16Q14005 1332 aa12.02□□□□□ -0.49
TMEM116-213ENST00000550831 KCNA6P17658 529 aa12.02□□□□□ -0.49
TMEM116-213ENST00000550831 NME9Q86XW9 330 aa12.02□□□□□ -0.49
TMEM116-213ENST00000550831 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
TMEM116-213ENST00000550831 ROBO1Q9Y6N7 1651 aa12.01□□□□□ -0.49
TMEM116-213ENST00000550831 ADGRL3Q9HAR2 1447 aa12□□□□□ -0.49
TMEM116-213ENST00000550831 CT47B1P0C2W7 299 aaPredicted RBP12□□□□□ -0.49
TMEM116-213ENST00000550831 IL13P35225 146 aa12□□□□□ -0.49
TMEM116-213ENST00000550831 GOLGA6L2Q8N9W4 650 aaPredicted RBP12□□□□□ -0.49
TMEM116-213ENST00000550831 TMPOP42166 694 aaKnown RBP11.99□□□□□ -0.49
TMEM116-213ENST00000550831 RSPH6AQ9H0K4 717 aa11.99□□□□□ -0.49
TMEM116-213ENST00000550831 TSHZ2Q9NRE2 1034 aa11.99□□□□□ -0.49
TMEM116-213ENST00000550831 KIF24Q5T7B8 1368 aa11.99□□□□□ -0.49
TMEM116-213ENST00000550831 PIK3C2AO00443 1686 aa11.99□□□□□ -0.49
TMEM116-213ENST00000550831 RGPD1P0DJD0 1748 aa11.98□□□□□ -0.49
TMEM116-213ENST00000550831 TMEM94Q12767 1356 aa11.98□□□□□ -0.49
TMEM116-213ENST00000550831 MARF1Q9Y4F3 1742 aaKnown RBP11.98□□□□□ -0.49
TMEM116-213ENST00000550831 POTEAQ6S8J7 498 aa11.97□□□□□ -0.49
TMEM116-213ENST00000550831 MYH16Q9H6N6 1097 aa11.97□□□□□ -0.49
TMEM116-213ENST00000550831 MAPK8IP3Q9UPT6 1336 aa11.97□□□□□ -0.49
TMEM116-213ENST00000550831 PEAK1Q9H792 1746 aa11.96□□□□□ -0.49
TMEM116-213ENST00000550831 U2SURPO15042 1029 aaKnown RBP11.96□□□□□ -0.49
TMEM116-213ENST00000550831 B4GALNT3Q6L9W6 998 aa11.96□□□□□ -0.49
TMEM116-213ENST00000550831 TRIM35Q9UPQ4 493 aa11.96□□□□□ -0.49
TMEM116-213ENST00000550831 EMILIN1Q9Y6C2 1016 aa11.96□□□□□ -0.49
TMEM116-213ENST00000550831 EXOC6Q8TAG9 804 aa11.95□□□□□ -0.5
TMEM116-213ENST00000550831 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
TMEM116-213ENST00000550831 NCOA3Q9Y6Q9 1424 aa11.95□□□□□ -0.5
TMEM116-213ENST00000550831 CCDC136Q96JN2 1154 aa11.94□□□□□ -0.5
TMEM116-213ENST00000550831 PHLPP1O60346 1717 aa11.94□□□□□ -0.5
TMEM116-213ENST00000550831 PDE3AQ14432 1141 aa11.94□□□□□ -0.5
TMEM116-213ENST00000550831 REM2Q8IYK8 340 aaPredicted RBP11.94□□□□□ -0.5
TMEM116-213ENST00000550831 RRP7AQ9Y3A4 280 aaKnown RBP11.94□□□□□ -0.5
TMEM116-213ENST00000550831 SBNO1A3KN83 1393 aa11.93□□□□□ -0.5
TMEM116-213ENST00000550831 PHRF1Q9P1Y6 1649 aaKnown RBP11.93□□□□□ -0.5
TMEM116-213ENST00000550831 NGDNQ8NEJ9 315 aaKnown RBP11.93□□□□□ -0.5
TMEM116-213ENST00000550831 MSH6P52701 1360 aa11.92□□□□□ -0.5
TMEM116-213ENST00000550831 MST1RQ04912 1400 aa11.92□□□□□ -0.5
TMEM116-213ENST00000550831 NEFMP07197 916 aa11.92□□□□□ -0.5
TMEM116-213ENST00000550831 FBLN1P23142 703 aa11.92□□□□□ -0.5
TMEM116-213ENST00000550831 PRKAR2BP31323 418 aa11.92□□□□□ -0.5
TMEM116-213ENST00000550831 RARSP54136 660 aaKnown RBP11.92□□□□□ -0.5
TMEM116-213ENST00000550831 AAMPQ13685 434 aa11.92□□□□□ -0.5
TMEM116-213ENST00000550831 NFE2L2Q16236 605 aa11.92□□□□□ -0.5
TMEM116-213ENST00000550831 PROSER2Q86WR7 435 aaPredicted RBP11.92□□□□□ -0.5
TMEM116-213ENST00000550831 ARHGEF10O15013 1369 aa11.91□□□□□ -0.5
TMEM116-213ENST00000550831 FLT4P35916 1363 aa11.91□□□□□ -0.5
TMEM116-213ENST00000550831 KIF1AQ12756 1690 aa11.91□□□□□ -0.5
TMEM116-213ENST00000550831 DLG5Q8TDM6 1919 aa11.91□□□□□ -0.5
TMEM116-213ENST00000550831 PLIN1O60240 522 aa11.91□□□□□ -0.5
TMEM116-213ENST00000550831 RIPK4P57078 832 aa11.91□□□□□ -0.5
TMEM116-213ENST00000550831 CALD1Q05682 793 aaKnown RBP11.91□□□□□ -0.5
TMEM116-213ENST00000550831 RRS1Q15050 365 aaKnown RBP11.91□□□□□ -0.5
TMEM116-213ENST00000550831 NEUROD2Q15784 382 aa11.91□□□□□ -0.5
TMEM116-213ENST00000550831 ZNF428Q96B54 188 aa11.91□□□□□ -0.5
TMEM116-213ENST00000550831 CRBNQ96SW2 442 aa11.91□□□□□ -0.5
TMEM116-213ENST00000550831 COL16A1Q07092 1604 aaPredicted RBP11.91□□□□□ -0.5
TMEM116-213ENST00000550831 JCADQ9P266 1359 aa11.91□□□□□ -0.5
TMEM116-213ENST00000550831 DCCP43146 1447 aa11.9□□□□□ -0.5
TMEM116-213ENST00000550831 LMOD3Q0VAK6 560 aa11.9□□□□□ -0.5
TMEM116-213ENST00000550831 EIF4A2Q14240 407 aaKnown RBP11.9□□□□□ -0.5
TMEM116-213ENST00000550831 SPDYE1Q8NFV5 336 aaPredicted RBP11.9□□□□□ -0.5
TMEM116-213ENST00000550831 PMFBP1Q8TBY8 1022 aa11.9□□□□□ -0.5
TMEM116-213ENST00000550831 PHF8Q9UPP1 1060 aa11.9□□□□□ -0.5
TMEM116-213ENST00000550831 FANCIQ9NVI1 1328 aa11.9□□□□□ -0.5
TMEM116-213ENST00000550831 RTL1A6NKG5 1358 aa11.9□□□□□ -0.5
TMEM116-213ENST00000550831 KDRP35968 1356 aa11.9□□□□□ -0.5
TMEM116-213ENST00000550831 NUTM2FA1L443 756 aa11.89□□□□□ -0.51
TMEM116-213ENST00000550831 PPM1GO15355 546 aaPredicted RBP11.89□□□□□ -0.51
TMEM116-213ENST00000550831 BRPF1P55201 1214 aaPredicted RBP11.89□□□□□ -0.51
TMEM116-213ENST00000550831 BCAR3O75815 825 aa11.88□□□□□ -0.51
TMEM116-213ENST00000550831 C20orf194Q5TEA3 1177 aa11.88□□□□□ -0.51
TMEM116-213ENST00000550831 RBM33Q96EV2 1170 aaKnown RBP11.88□□□□□ -0.51
TMEM116-213ENST00000550831 MAP3K19Q56UN5 1328 aa11.88□□□□□ -0.51
TMEM116-213ENST00000550831 NFAT5O94916 1531 aa11.88□□□□□ -0.51
TMEM116-213ENST00000550831 TRPM3Q9HCF6 1732 aaPredicted RBP11.88□□□□□ -0.51
TMEM116-213ENST00000550831 ZNF853P0CG23 659 aa11.87□□□□□ -0.51
TMEM116-213ENST00000550831 PHACTR3Q96KR7 559 aa11.87□□□□□ -0.51
TMEM116-213ENST00000550831 IFT57Q9NWB7 429 aa11.87□□□□□ -0.51
TMEM116-213ENST00000550831 SLIT3O75094 1523 aa11.86□□□□□ -0.51
TMEM116-213ENST00000550831 IGSF1Q8N6C5 1336 aa11.86□□□□□ -0.51
TMEM116-213ENST00000550831 KDM2BQ8NHM5 1336 aa11.86□□□□□ -0.51
TMEM116-213ENST00000550831 SLAIN2Q9P270 581 aa11.86□□□□□ -0.51
TMEM116-213ENST00000550831 LRP6O75581 1613 aa11.86□□□□□ -0.51
TMEM116-213ENST00000550831 AHDC1Q5TGY3 1603 aaPredicted RBP11.86□□□□□ -0.51
TMEM116-213ENST00000550831 HMOX1P09601 288 aa11.86□□□□□ -0.51
TMEM116-213ENST00000550831 MS4A1P11836 297 aa11.86□□□□□ -0.51
TMEM116-213ENST00000550831 GNAI1P63096 354 aa11.86□□□□□ -0.51
TMEM116-213ENST00000550831 ALDH1L2Q3SY69 923 aa11.86□□□□□ -0.51
TMEM116-213ENST00000550831 C19orf44Q9H6X5 657 aa11.86□□□□□ -0.51
TMEM116-213ENST00000550831 SPATA31A6Q5VVP1 1343 aa11.85□□□□□ -0.51
TMEM116-213ENST00000550831 NLRP6P59044 892 aa11.85□□□□□ -0.51
TMEM116-213ENST00000550831 HSP90AB2PQ58FF8 381 aa11.85□□□□□ -0.51
TMEM116-213ENST00000550831 C1orf167Q5SNV9 1468 aa11.84□□□□□ -0.51
TMEM116-213ENST00000550831 LTN1O94822 1766 aa11.84□□□□□ -0.51
TMEM116-213ENST00000550831 EXOSC9Q06265 439 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms