RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 TBC1D9Q6ZT07 1266 aa17.11■□□□□ 0.33
HDAC7-228ENST00000548938 MED14O60244 1454 aa17.11■□□□□ 0.33
HDAC7-228ENST00000548938 K7ELQ4 463 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-228ENST00000548938 SSFA2P28290 1259 aa17.11■□□□□ 0.33
HDAC7-228ENST00000548938 RIMS2Q9UQ26 1411 aa17.11■□□□□ 0.33
HDAC7-228ENST00000548938 RRP9O43818 475 aaKnown RBP17.1■□□□□ 0.33
HDAC7-228ENST00000548938 ALDH1L2Q3SY69 923 aa17.1■□□□□ 0.33
HDAC7-228ENST00000548938 GLIPR1L2Q4G1C9 344 aa17.1■□□□□ 0.33
HDAC7-228ENST00000548938 GAS2L2Q8NHY3 880 aa17.09■□□□□ 0.33
HDAC7-228ENST00000548938 TNRQ92752 1358 aa17.09■□□□□ 0.33
HDAC7-228ENST00000548938 ALKQ9UM73 1620 aa17.09■□□□□ 0.33
HDAC7-228ENST00000548938 SRPK2P78362 688 aaKnown RBP17.09■□□□□ 0.33
HDAC7-228ENST00000548938 YTHDC2Q9H6S0 1430 aaKnown RBP17.08■□□□□ 0.32
HDAC7-228ENST00000548938 FYB1O15117 783 aa17.08■□□□□ 0.32
HDAC7-228ENST00000548938 ZBTB7BO15156 539 aaPredicted RBP17.07■□□□□ 0.32
HDAC7-228ENST00000548938 DIAPH1O60610 1272 aaKnown RBP17.07■□□□□ 0.32
HDAC7-228ENST00000548938 PTMSP20962 102 aa17.07■□□□□ 0.32
HDAC7-228ENST00000548938 GCC1Q96CN9 775 aa17.07■□□□□ 0.32
HDAC7-228ENST00000548938 LRRC7Q96NW7 1537 aa17.06■□□□□ 0.32
HDAC7-228ENST00000548938 PTPRMP28827 1452 aa17.06■□□□□ 0.32
HDAC7-228ENST00000548938 CEBPAP49715 358 aaPredicted RBP17.05■□□□□ 0.32
HDAC7-228ENST00000548938 SIRT2Q8IXJ6 389 aa17.05■□□□□ 0.32
HDAC7-228ENST00000548938 PKNOX2Q96KN3 472 aa17.05■□□□□ 0.32
HDAC7-228ENST00000548938 PRAM1Q96QH2 718 aa17.05■□□□□ 0.32
HDAC7-228ENST00000548938 NASPP49321 788 aaPredicted RBP17.05■□□□□ 0.32
HDAC7-228ENST00000548938 VSIG10Q8N0Z9 540 aa17.05■□□□□ 0.32
HDAC7-228ENST00000548938 CCDC173Q0VFZ6 552 aa17.04■□□□□ 0.32
HDAC7-228ENST00000548938 THUMPD2Q9BTF0 503 aaKnown RBP17.04■□□□□ 0.32
HDAC7-228ENST00000548938 ANKRD26Q9UPS8 1709 aa17.04■□□□□ 0.32
HDAC7-228ENST00000548938 CD163L1Q9NR16 1453 aa17.03■□□□□ 0.32
HDAC7-228ENST00000548938 GOLGA6L22H0YM25 854 aa17.03■□□□□ 0.32
HDAC7-228ENST00000548938 BAG4O95429 457 aaKnown RBP17.03■□□□□ 0.32
HDAC7-228ENST00000548938 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.03■□□□□ 0.32
HDAC7-228ENST00000548938 DDX49Q9Y6V7 483 aaKnown RBP17.03■□□□□ 0.32
HDAC7-228ENST00000548938 PRKAR2BP31323 418 aa17.03■□□□□ 0.32
HDAC7-228ENST00000548938 BRPF1P55201 1214 aaPredicted RBP17.03■□□□□ 0.32
HDAC7-228ENST00000548938 MRPL50Q8N5N7 158 aaKnown RBP17.03■□□□□ 0.32
HDAC7-228ENST00000548938 TSPYL6Q8N831 410 aa17.03■□□□□ 0.32
HDAC7-228ENST00000548938 PPP1R9BQ96SB3 815 aa17.03■□□□□ 0.32
HDAC7-228ENST00000548938 PTCH1Q13635 1447 aa17.03■□□□□ 0.32
HDAC7-228ENST00000548938 PNPLA6Q8IY17 1366 aa17.02■□□□□ 0.32
HDAC7-228ENST00000548938 PIK3R4Q99570 1358 aa17.02■□□□□ 0.32
HDAC7-228ENST00000548938 KLHL40Q2TBA0 621 aa17.02■□□□□ 0.32
HDAC7-228ENST00000548938 MINK1Q8N4C8 1332 aaPredicted RBP17.02■□□□□ 0.31
HDAC7-228ENST00000548938 CDC45O75419 566 aa17.02■□□□□ 0.31
HDAC7-228ENST00000548938 TERF2IPQ9NYB0 399 aa17.02■□□□□ 0.31
HDAC7-228ENST00000548938 VAMP4O75379 141 aa17.01■□□□□ 0.31
HDAC7-228ENST00000548938 GSPT1P15170 499 aaKnown RBP17.01■□□□□ 0.31
HDAC7-228ENST00000548938 CLEC17AQ6ZS10 378 aa17.01■□□□□ 0.31
HDAC7-228ENST00000548938 FAM135BQ49AJ0 1406 aa17.01■□□□□ 0.31
HDAC7-228ENST00000548938 ELL2O00472 640 aaPredicted RBP17■□□□□ 0.31
HDAC7-228ENST00000548938 ZNF428Q96B54 188 aa17■□□□□ 0.31
HDAC7-228ENST00000548938 ATAD2Q6PL18 1390 aa17■□□□□ 0.31
HDAC7-228ENST00000548938 IBTKQ9P2D0 1353 aaPredicted RBP17■□□□□ 0.31
HDAC7-228ENST00000548938 FCHSD2O94868 740 aa17■□□□□ 0.31
HDAC7-228ENST00000548938 AK9Q5TCS8 1911 aa17■□□□□ 0.31
HDAC7-228ENST00000548938 TMEM2Q9UHN6 1383 aa16.99■□□□□ 0.31
HDAC7-228ENST00000548938 TPM2P07951 284 aa16.99■□□□□ 0.31
HDAC7-228ENST00000548938 FBLN1P23142 703 aa16.99■□□□□ 0.31
HDAC7-228ENST00000548938 ABCC4O15439 1325 aa16.99■□□□□ 0.31
HDAC7-228ENST00000548938 PLEKHG5O94827 1062 aa16.99■□□□□ 0.31
HDAC7-228ENST00000548938 ZSCAN30Q86W11 494 aa16.99■□□□□ 0.31
HDAC7-228ENST00000548938 ARHGAP45Q92619 1136 aa16.99■□□□□ 0.31
HDAC7-228ENST00000548938 HDGFP51858 240 aaKnown RBP16.98■□□□□ 0.31
HDAC7-228ENST00000548938 KIAA1211Q6ZU35 1233 aa16.98■□□□□ 0.31
HDAC7-228ENST00000548938 PHACTR3Q96KR7 559 aa16.98■□□□□ 0.31
HDAC7-228ENST00000548938 CHMP4BQ9H444 224 aaKnown RBP16.98■□□□□ 0.31
HDAC7-228ENST00000548938 CDC42BPGQ6DT37 1551 aa16.98■□□□□ 0.31
HDAC7-228ENST00000548938 NRXN3Q9Y4C0 1643 aa16.98■□□□□ 0.31
HDAC7-228ENST00000548938 SETD1AO15047 1707 aaKnown RBP16.98■□□□□ 0.31
HDAC7-228ENST00000548938 MCTP1Q6DN14 999 aa16.98■□□□□ 0.31
HDAC7-228ENST00000548938 ZMYND15Q9H091 742 aa16.98■□□□□ 0.31
HDAC7-228ENST00000548938 METP08581 1390 aa16.98■□□□□ 0.31
HDAC7-228ENST00000548938 HMOX1P09601 288 aa16.98■□□□□ 0.31
HDAC7-228ENST00000548938 WAPLQ7Z5K2 1190 aa16.98■□□□□ 0.31
HDAC7-228ENST00000548938 ANP32BQ92688 251 aaKnown RBP16.98■□□□□ 0.31
HDAC7-228ENST00000548938 PLPPR3Q6T4P5 718 aa16.97■□□□□ 0.31
HDAC7-228ENST00000548938 UBR1Q8IWV7 1749 aa16.97■□□□□ 0.31
HDAC7-228ENST00000548938 PKP1Q13835 747 aa16.96■□□□□ 0.31
HDAC7-228ENST00000548938 RABEP1Q15276 862 aa16.96■□□□□ 0.31
HDAC7-228ENST00000548938 NFE2L2Q16236 605 aa16.96■□□□□ 0.31
HDAC7-228ENST00000548938 CAVIN1Q6NZI2 390 aaKnown RBP16.96■□□□□ 0.31
HDAC7-228ENST00000548938 PLEKHM2Q8IWE5 1019 aa16.96■□□□□ 0.31
HDAC7-228ENST00000548938 NCLP19338 710 aaKnown RBP16.95■□□□□ 0.3
HDAC7-228ENST00000548938 ZNF445P59923 1031 aa16.95■□□□□ 0.3
HDAC7-228ENST00000548938 HDGFL2Q7Z4V5 671 aaPredicted RBP16.95■□□□□ 0.3
HDAC7-228ENST00000548938 MBIPQ9NS73 344 aa16.95■□□□□ 0.3
HDAC7-228ENST00000548938 DLC1Q96QB1 1528 aa16.95■□□□□ 0.3
HDAC7-228ENST00000548938 CYP2E1P05181 493 aaPredicted RBP16.94■□□□□ 0.3
HDAC7-228ENST00000548938 LTKP29376 864 aa16.94■□□□□ 0.3
HDAC7-228ENST00000548938 ZSCAN23Q3MJ62 389 aa16.94■□□□□ 0.3
HDAC7-228ENST00000548938 KNDC1Q76NI1 1749 aa16.94■□□□□ 0.3
HDAC7-228ENST00000548938 C3P01024 1663 aa16.94■□□□□ 0.3
HDAC7-228ENST00000548938 MSNP26038 577 aaKnown RBP16.94■□□□□ 0.3
HDAC7-228ENST00000548938 CDK19Q9BWU1 502 aa16.94■□□□□ 0.3
HDAC7-228ENST00000548938 DNAJC5Q9H3Z4 198 aa16.94■□□□□ 0.3
HDAC7-228ENST00000548938 LMBRD1Q9NUN5 540 aa16.94■□□□□ 0.3
HDAC7-228ENST00000548938 POLKQ9UBT6 870 aa16.94■□□□□ 0.3
HDAC7-228ENST00000548938 TWISTNBQ3B726 338 aaPredicted RBP16.93■□□□□ 0.3
HDAC7-228ENST00000548938 TTC22Q5TAA0 569 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms