RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 CFAP65Q6ZU64 1925 aaKnown RBP28.6■■■□□ 2.17
NPAS3-206ENST00000548645 PTCH1Q13635 1447 aa28.6■■■□□ 2.17
NPAS3-206ENST00000548645 ASXL2Q76L83 1435 aa28.6■■■□□ 2.17
NPAS3-206ENST00000548645 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.6■■■□□ 2.17
NPAS3-206ENST00000548645 MRPL50Q8N5N7 158 aaKnown RBP28.6■■■□□ 2.17
NPAS3-206ENST00000548645 PNPLA6Q8IY17 1366 aa28.59■■■□□ 2.17
NPAS3-206ENST00000548645 SAFB2Q14151 953 aaKnown RBP eCLIP28.59■■■□□ 2.17
NPAS3-206ENST00000548645 CALD1Q05682 793 aaKnown RBP28.58■■■□□ 2.17
NPAS3-206ENST00000548645 HS1BP3Q53T59 392 aa28.58■■■□□ 2.17
NPAS3-206ENST00000548645 ANKRD26Q9UPS8 1709 aa28.58■■■□□ 2.17
NPAS3-206ENST00000548645 VAMP4O75379 141 aa28.57■■■□□ 2.16
NPAS3-206ENST00000548645 TERF1P54274 439 aa28.57■■■□□ 2.16
NPAS3-206ENST00000548645 SIRT2Q8IXJ6 389 aa28.57■■■□□ 2.16
NPAS3-206ENST00000548645 ATAD2Q6PL18 1390 aa28.57■■■□□ 2.16
NPAS3-206ENST00000548645 MCTP1Q6DN14 999 aa28.56■■■□□ 2.16
NPAS3-206ENST00000548645 NUTM2DQ5VT03 806 aaPredicted RBP28.55■■■□□ 2.16
NPAS3-206ENST00000548645 CAMSAP1Q5T5Y3 1602 aa28.54■■■□□ 2.16
NPAS3-206ENST00000548645 GGT6Q6P531 493 aa28.54■■■□□ 2.16
NPAS3-206ENST00000548645 ABCC4O15439 1325 aa28.54■■■□□ 2.16
NPAS3-206ENST00000548645 ZFYVE9O95405 1425 aa28.53■■■□□ 2.16
NPAS3-206ENST00000548645 PRKAR2BP31323 418 aa28.53■■■□□ 2.16
NPAS3-206ENST00000548645 NCLP19338 710 aaKnown RBP28.53■■■□□ 2.16
NPAS3-206ENST00000548645 ZSCAN23Q3MJ62 389 aa28.53■■■□□ 2.16
NPAS3-206ENST00000548645 CAVIN1Q6NZI2 390 aaKnown RBP28.53■■■□□ 2.16
NPAS3-206ENST00000548645 LRRC7Q96NW7 1537 aa28.52■■■□□ 2.16
NPAS3-206ENST00000548645 CYP2E1P05181 493 aaPredicted RBP28.52■■■□□ 2.16
NPAS3-206ENST00000548645 GSPT1P15170 499 aaKnown RBP28.52■■■□□ 2.16
NPAS3-206ENST00000548645 LMBRD1Q9NUN5 540 aa28.52■■■□□ 2.16
NPAS3-206ENST00000548645 FAM135BQ49AJ0 1406 aa28.51■■■□□ 2.16
NPAS3-206ENST00000548645 CDC42BPGQ6DT37 1551 aa28.51■■■□□ 2.15
NPAS3-206ENST00000548645 CWC22Q9HCG8 908 aaKnown RBP28.51■■■□□ 2.15
NPAS3-206ENST00000548645 PLEKHM2Q8IWE5 1019 aa28.5■■■□□ 2.15
NPAS3-206ENST00000548645 NEXMIFQ5QGS0 1516 aa28.5■■■□□ 2.15
NPAS3-206ENST00000548645 GNAI1P63096 354 aa28.5■■■□□ 2.15
NPAS3-206ENST00000548645 NFE2L2Q16236 605 aa28.49■■■□□ 2.15
NPAS3-206ENST00000548645 HDGFL2Q7Z4V5 671 aaPredicted RBP28.49■■■□□ 2.15
NPAS3-206ENST00000548645 API5Q9BZZ5 524 aaKnown RBP28.48■■■□□ 2.15
NPAS3-206ENST00000548645 NOL7Q9UMY1 257 aaKnown RBP28.48■■■□□ 2.15
NPAS3-206ENST00000548645 TSPYL6Q8N831 410 aa28.48■■■□□ 2.15
NPAS3-206ENST00000548645 USP26Q9BXU7 913 aa28.48■■■□□ 2.15
NPAS3-206ENST00000548645 IFT57Q9NWB7 429 aa28.48■■■□□ 2.15
NPAS3-206ENST00000548645 STK26Q9P289 416 aa28.48■■■□□ 2.15
NPAS3-206ENST00000548645 HECW2Q9P2P5 1572 aa28.48■■■□□ 2.15
NPAS3-206ENST00000548645 AK9Q5TCS8 1911 aa28.47■■■□□ 2.15
NPAS3-206ENST00000548645 CD163L1Q9NR16 1453 aa28.47■■■□□ 2.15
NPAS3-206ENST00000548645 TTC22Q5TAA0 569 aa28.47■■■□□ 2.15
NPAS3-206ENST00000548645 PDLIM2Q96JY6 352 aa28.47■■■□□ 2.15
NPAS3-206ENST00000548645 INTS3Q68E01 1043 aaKnown RBP28.46■■■□□ 2.15
NPAS3-206ENST00000548645 RBSNQ9H1K0 784 aa28.46■■■□□ 2.15
NPAS3-206ENST00000548645 ZNF500O60304 480 aaPredicted RBP28.45■■■□□ 2.15
NPAS3-206ENST00000548645 DCTPP1Q9H773 170 aa28.45■■■□□ 2.15
NPAS3-206ENST00000548645 PIK3C2BO00750 1634 aa28.45■■■□□ 2.14
NPAS3-206ENST00000548645 ABCC3O15438 1527 aa28.45■■■□□ 2.14
NPAS3-206ENST00000548645 KIF24Q5T7B8 1368 aa28.44■■■□□ 2.14
NPAS3-206ENST00000548645 ST18O60284 1047 aa28.43■■■□□ 2.14
NPAS3-206ENST00000548645 MINK1Q8N4C8 1332 aaPredicted RBP28.43■■■□□ 2.14
NPAS3-206ENST00000548645 THUMPD2Q9BTF0 503 aaKnown RBP28.43■■■□□ 2.14
NPAS3-206ENST00000548645 ELL2O00472 640 aaPredicted RBP28.42■■■□□ 2.14
NPAS3-206ENST00000548645 TWISTNBQ3B726 338 aaPredicted RBP28.42■■■□□ 2.14
NPAS3-206ENST00000548645 CASC1Q6TDU7 716 aa28.42■■■□□ 2.14
NPAS3-206ENST00000548645 PHACTR3Q96KR7 559 aa28.42■■■□□ 2.14
NPAS3-206ENST00000548645 MBIPQ9NS73 344 aa28.42■■■□□ 2.14
NPAS3-206ENST00000548645 ZNF853P0CG23 659 aa28.41■■■□□ 2.14
NPAS3-206ENST00000548645 PRIM1P49642 420 aaKnown RBP28.41■■■□□ 2.14
NPAS3-206ENST00000548645 FRMPD1Q5SYB0 1578 aa28.41■■■□□ 2.14
NPAS3-206ENST00000548645 MAP7D2Q96T17 732 aa28.41■■■□□ 2.14
NPAS3-206ENST00000548645 R3HCC1Q9Y3T6 440 aaKnown RBP28.41■■■□□ 2.14
NPAS3-206ENST00000548645 PRPF40AO75400 957 aaKnown RBP28.4■■■□□ 2.14
NPAS3-206ENST00000548645 PKP1Q13835 747 aa28.4■■■□□ 2.14
NPAS3-206ENST00000548645 CLTCQ00610 1675 aaKnown RBP28.39■■■□□ 2.13
NPAS3-206ENST00000548645 POLKQ9UBT6 870 aa28.39■■■□□ 2.13
NPAS3-206ENST00000548645 PTPRMP28827 1452 aa28.38■■■□□ 2.13
NPAS3-206ENST00000548645 MCM5P33992 734 aa28.38■■■□□ 2.13
NPAS3-206ENST00000548645 PRAM1Q96QH2 718 aa28.38■■■□□ 2.13
NPAS3-206ENST00000548645 HMOX1P09601 288 aa28.38■■■□□ 2.13
NPAS3-206ENST00000548645 KIF20BQ96Q89 1820 aa28.37■■■□□ 2.13
NPAS3-206ENST00000548645 GPT2Q8TD30 523 aa28.37■■■□□ 2.13
NPAS3-206ENST00000548645 CSPP1Q1MSJ5 1256 aa28.36■■■□□ 2.13
NPAS3-206ENST00000548645 ZKSCAN5Q9Y2L8 839 aa28.36■■■□□ 2.13
NPAS3-206ENST00000548645 MLH3Q9UHC1 1453 aa28.36■■■□□ 2.13
NPAS3-206ENST00000548645 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.36■■■□□ 2.13
NPAS3-206ENST00000548645 YEATS2Q9ULM3 1422 aa28.36■■■□□ 2.13
NPAS3-206ENST00000548645 SIGLEC1Q9BZZ2 1709 aa28.35■■■□□ 2.13
NPAS3-206ENST00000548645 LMOD3Q0VAK6 560 aa28.35■■■□□ 2.13
NPAS3-206ENST00000548645 LRSAM1Q6UWE0 723 aa28.35■■■□□ 2.13
NPAS3-206ENST00000548645 RBM10P98175 930 aaKnown RBP28.35■■■□□ 2.13
NPAS3-206ENST00000548645 C16orf71Q8IYS4 520 aaPredicted RBP28.35■■■□□ 2.13
NPAS3-206ENST00000548645 ZGPATQ8N5A5 531 aaKnown RBP28.35■■■□□ 2.13
NPAS3-206ENST00000548645 REC8O95072 547 aa28.34■■■□□ 2.13
NPAS3-206ENST00000548645 C8orf58Q8NAV2 365 aa28.34■■■□□ 2.13
NPAS3-206ENST00000548645 CABP1Q9NZU7 370 aa28.34■■■□□ 2.13
NPAS3-206ENST00000548645 ANKRD44Q8N8A2 993 aa28.34■■■□□ 2.13
NPAS3-206ENST00000548645 RBM27Q9P2N5 1060 aaKnown RBP28.34■■■□□ 2.13
NPAS3-206ENST00000548645 SDSP20132 328 aa28.33■■■□□ 2.13
NPAS3-206ENST00000548645 XPCQ01831 940 aaPredicted RBP28.33■■■□□ 2.13
NPAS3-206ENST00000548645 ZDHHC9Q9Y397 364 aa28.33■■■□□ 2.13
NPAS3-206ENST00000548645 POGZQ7Z3K3 1410 aa28.33■■■□□ 2.13
NPAS3-206ENST00000548645 KNDC1Q76NI1 1749 aa28.33■■■□□ 2.13
NPAS3-206ENST00000548645 YTHDC2Q9H6S0 1430 aaKnown RBP28.32■■■□□ 2.12
NPAS3-206ENST00000548645 RPAP2Q8IXW5 612 aaPredicted RBP28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms