RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 SBNO1A3KN83 1393 aa27.06■■□□□ 1.92
RITA1-201ENST00000548278 NLRP6P59044 892 aa27.06■■□□□ 1.92
RITA1-201ENST00000548278 DLG5Q8TDM6 1919 aa27.06■■□□□ 1.92
RITA1-201ENST00000548278 FLT4P35916 1363 aa27.05■■□□□ 1.92
RITA1-201ENST00000548278 CANXP27824 592 aaKnown RBP27.04■■□□□ 1.92
RITA1-201ENST00000548278 AEBP1Q8IUX7 1158 aa27.04■■□□□ 1.92
RITA1-201ENST00000548278 SULT6B1Q6IMI4 303 aa27.04■■□□□ 1.92
RITA1-201ENST00000548278 FRAT1Q92837 279 aaPredicted RBP27.03■■□□□ 1.92
RITA1-201ENST00000548278 BCL2L13Q9BXK5 485 aa27.03■■□□□ 1.92
RITA1-201ENST00000548278 PANK1Q8TE04 598 aa27.02■■□□□ 1.92
RITA1-201ENST00000548278 KDM2BQ8NHM5 1336 aa27.02■■□□□ 1.92
RITA1-201ENST00000548278 ABTB2Q8N961 1025 aa27.01■■□□□ 1.91
RITA1-201ENST00000548278 CALD1Q05682 793 aaKnown RBP27.01■■□□□ 1.91
RITA1-201ENST00000548278 C14orf37Q86TY3 774 aa27.01■■□□□ 1.91
RITA1-201ENST00000548278 PAK3O75914 559 aaPredicted RBP27■■□□□ 1.91
RITA1-201ENST00000548278 LMOD3Q0VAK6 560 aa27■■□□□ 1.91
RITA1-201ENST00000548278 ESCO1Q5FWF5 840 aa27■■□□□ 1.91
RITA1-201ENST00000548278 NUTM2GQ5VZR2 741 aa27■■□□□ 1.91
RITA1-201ENST00000548278 ARHGEF10O15013 1369 aa27■■□□□ 1.91
RITA1-201ENST00000548278 THUMPD2Q9BTF0 503 aaKnown RBP26.99■■□□□ 1.91
RITA1-201ENST00000548278 AMPHP49418 695 aa26.98■■□□□ 1.91
RITA1-201ENST00000548278 KIF24Q5T7B8 1368 aa26.98■■□□□ 1.91
RITA1-201ENST00000548278 IFT57Q9NWB7 429 aa26.97■■□□□ 1.91
RITA1-201ENST00000548278 PROSER2Q86WR7 435 aaPredicted RBP26.97■■□□□ 1.91
RITA1-201ENST00000548278 COG6Q9Y2V7 657 aa26.97■■□□□ 1.91
RITA1-201ENST00000548278 ZNF853P0CG23 659 aa26.96■■□□□ 1.91
RITA1-201ENST00000548278 CENPQQ7L2Z9 268 aaPredicted RBP26.96■■□□□ 1.91
RITA1-201ENST00000548278 SSH1Q8WYL5 1049 aa26.96■■□□□ 1.91
RITA1-201ENST00000548278 RLBP1P12271 317 aa26.95■■□□□ 1.9
RITA1-201ENST00000548278 GNAI1P63096 354 aa26.95■■□□□ 1.9
RITA1-201ENST00000548278 TNNQ9UQP3 1299 aa26.95■■□□□ 1.9
RITA1-201ENST00000548278 SMC4Q9NTJ3 1288 aa26.94■■□□□ 1.9
RITA1-201ENST00000548278 PSME1Q06323 249 aa26.94■■□□□ 1.9
RITA1-201ENST00000548278 LAS1LQ9Y4W2 734 aaKnown RBP26.94■■□□□ 1.9
RITA1-201ENST00000548278 KDRP35968 1356 aa26.93■■□□□ 1.9
RITA1-201ENST00000548278 FAM83GA6ND36 823 aa26.92■■□□□ 1.9
RITA1-201ENST00000548278 TCERG1O14776 1098 aaKnown RBP26.92■■□□□ 1.9
RITA1-201ENST00000548278 HOXC9P31274 260 aa26.92■■□□□ 1.9
RITA1-201ENST00000548278 ZKSCAN2Q63HK3 967 aa26.92■■□□□ 1.9
RITA1-201ENST00000548278 ORAI2Q96SN7 254 aa26.92■■□□□ 1.9
RITA1-201ENST00000548278 IGSF1Q8N6C5 1336 aa26.91■■□□□ 1.9
RITA1-201ENST00000548278 CFAP44Q96MT7 982 aa26.91■■□□□ 1.9
RITA1-201ENST00000548278 EYA1Q99502 592 aa26.91■■□□□ 1.9
RITA1-201ENST00000548278 CLUAP1Q96AJ1 413 aa26.9■■□□□ 1.9
RITA1-201ENST00000548278 MBIPQ9NS73 344 aa26.89■■□□□ 1.9
RITA1-201ENST00000548278 AAMPQ13685 434 aa26.89■■□□□ 1.89
RITA1-201ENST00000548278 ALDH1L2Q3SY69 923 aa26.89■■□□□ 1.89
RITA1-201ENST00000548278 ZNF428Q96B54 188 aa26.89■■□□□ 1.89
RITA1-201ENST00000548278 C19orf44Q9H6X5 657 aa26.89■■□□□ 1.89
RITA1-201ENST00000548278 NFAT5O94916 1531 aa26.89■■□□□ 1.89
RITA1-201ENST00000548278 DCTN1Q14203 1278 aa26.88■■□□□ 1.89
RITA1-201ENST00000548278 STRCP1A6NGW2 1772 aa26.88■■□□□ 1.89
RITA1-201ENST00000548278 LTN1O94822 1766 aa26.87■■□□□ 1.89
RITA1-201ENST00000548278 RTL1A6NKG5 1358 aa26.87■■□□□ 1.89
RITA1-201ENST00000548278 C1orf167Q5SNV9 1468 aa26.86■■□□□ 1.89
RITA1-201ENST00000548278 FOXO3O43524 673 aa26.86■■□□□ 1.89
RITA1-201ENST00000548278 MS4A1P11836 297 aa26.86■■□□□ 1.89
RITA1-201ENST00000548278 DZIP1LQ8IYY4 767 aaKnown RBP26.86■■□□□ 1.89
RITA1-201ENST00000548278 VAMP4O75379 141 aa26.85■■□□□ 1.89
RITA1-201ENST00000548278 TRIM27P14373 513 aa26.85■■□□□ 1.89
RITA1-201ENST00000548278 BRPF1P55201 1214 aaPredicted RBP26.85■■□□□ 1.89
RITA1-201ENST00000548278 MVPQ14764 893 aaKnown RBP26.84■■□□□ 1.89
RITA1-201ENST00000548278 ATF7IPQ6VMQ6 1270 aa26.84■■□□□ 1.89
RITA1-201ENST00000548278 NOB1Q9ULX3 412 aaKnown RBP26.84■■□□□ 1.89
RITA1-201ENST00000548278 SKAP1Q86WV1 359 aa26.83■■□□□ 1.89
RITA1-201ENST00000548278 TSPYL6Q8N831 410 aa26.83■■□□□ 1.89
RITA1-201ENST00000548278 KIF1AQ12756 1690 aa26.83■■□□□ 1.89
RITA1-201ENST00000548278 KIF16BQ96L93 1317 aa26.83■■□□□ 1.89
RITA1-201ENST00000548278 HSPA2P54652 639 aa26.83■■□□□ 1.89
RITA1-201ENST00000548278 FTSJ3Q8IY81 847 aaKnown RBP26.83■■□□□ 1.89
RITA1-201ENST00000548278 TMEM94Q12767 1356 aa26.82■■□□□ 1.88
RITA1-201ENST00000548278 MTHFSDQ2M296 383 aaKnown RBP26.82■■□□□ 1.88
RITA1-201ENST00000548278 TRPM3Q9HCF6 1732 aaPredicted RBP26.82■■□□□ 1.88
RITA1-201ENST00000548278 IGHDP01880 384 aa26.81■■□□□ 1.88
RITA1-201ENST00000548278 KCNH5Q8NCM2 988 aa26.81■■□□□ 1.88
RITA1-201ENST00000548278 IP6K1Q92551 441 aa26.81■■□□□ 1.88
RITA1-201ENST00000548278 NCOA3Q9Y6Q9 1424 aa26.81■■□□□ 1.88
RITA1-201ENST00000548278 XPCQ01831 940 aaPredicted RBP26.8■■□□□ 1.88
RITA1-201ENST00000548278 MCM10Q7L590 875 aa26.8■■□□□ 1.88
RITA1-201ENST00000548278 PHRF1Q9P1Y6 1649 aaKnown RBP26.8■■□□□ 1.88
RITA1-201ENST00000548278 IPO8O15397 1037 aaKnown RBP26.79■■□□□ 1.88
RITA1-201ENST00000548278 CHL1O00533 1208 aa26.78■■□□□ 1.88
RITA1-201ENST00000548278 C8orf58Q8NAV2 365 aa26.78■■□□□ 1.88
RITA1-201ENST00000548278 SLIT3O75094 1523 aa26.78■■□□□ 1.88
RITA1-201ENST00000548278 DCCP43146 1447 aa26.78■■□□□ 1.88
RITA1-201ENST00000548278 CRB1P82279 1406 aa26.78■■□□□ 1.88
RITA1-201ENST00000548278 MST1RQ04912 1400 aa26.77■■□□□ 1.88
RITA1-201ENST00000548278 TWISTNBQ3B726 338 aaPredicted RBP26.77■■□□□ 1.88
RITA1-201ENST00000548278 PCDHB15Q9Y5E8 787 aa26.77■■□□□ 1.88
RITA1-201ENST00000548278 KRT28Q7Z3Y7 464 aa26.77■■□□□ 1.88
RITA1-201ENST00000548278 MRPL50Q8N5N7 158 aaKnown RBP26.77■■□□□ 1.88
RITA1-201ENST00000548278 GAS2L2Q8NHY3 880 aa26.77■■□□□ 1.88
RITA1-201ENST00000548278 LTV1Q96GA3 475 aaPredicted RBP26.77■■□□□ 1.88
RITA1-201ENST00000548278 KDM4FA0A1W2PPD8 638 aa26.75■■□□□ 1.87
RITA1-201ENST00000548278 ELL2O00472 640 aaPredicted RBP26.75■■□□□ 1.87
RITA1-201ENST00000548278 ATF3P18847 181 aa26.75■■□□□ 1.87
RITA1-201ENST00000548278 USP19O94966 1318 aa26.74■■□□□ 1.87
RITA1-201ENST00000548278 GCP02774 474 aa26.74■■□□□ 1.87
RITA1-201ENST00000548278 DDX19BQ9UMR2 479 aa26.73■■□□□ 1.87
RITA1-201ENST00000548278 PDE4AP27815 886 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms