RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 RBM33Q96EV2 1170 aaKnown RBP8.61□□□□□ -1.03
PTPRR-207ENST00000548220 LTBP4Q8N2S1 1624 aa8.61□□□□□ -1.03
PTPRR-207ENST00000548220 LRRC7Q96NW7 1537 aa8.61□□□□□ -1.03
PTPRR-207ENST00000548220 CERKQ8TCT0 537 aa8.61□□□□□ -1.03
PTPRR-207ENST00000548220 CDK19Q9BWU1 502 aa8.61□□□□□ -1.03
PTPRR-207ENST00000548220 XIRP1Q702N8 1843 aaKnown RBP8.6□□□□□ -1.03
PTPRR-207ENST00000548220 KIF7Q2M1P5 1343 aa8.6□□□□□ -1.03
PTPRR-207ENST00000548220 NALCNQ8IZF0 1738 aa8.6□□□□□ -1.03
PTPRR-207ENST00000548220 FMN2Q9NZ56 1722 aa8.6□□□□□ -1.03
PTPRR-207ENST00000548220 MSH6P52701 1360 aa8.6□□□□□ -1.03
PTPRR-207ENST00000548220 TMEM94Q12767 1356 aa8.6□□□□□ -1.03
PTPRR-207ENST00000548220 TULP4Q9NRJ4 1543 aa8.6□□□□□ -1.03
PTPRR-207ENST00000548220 PLEKHG3A1L390 1219 aa8.6□□□□□ -1.03
PTPRR-207ENST00000548220 ZNF687Q8N1G0 1237 aa8.6□□□□□ -1.03
PTPRR-207ENST00000548220 DISP3Q9P2K9 1392 aa8.59□□□□□ -1.03
PTPRR-207ENST00000548220 PLEKHH1Q9ULM0 1364 aa8.59□□□□□ -1.03
PTPRR-207ENST00000548220 ATF3P18847 181 aa8.59□□□□□ -1.03
PTPRR-207ENST00000548220 GPR153Q6NV75 609 aa8.59□□□□□ -1.03
PTPRR-207ENST00000548220 ATP7BP35670 1465 aa8.58□□□□□ -1.04
PTPRR-207ENST00000548220 SRPK2P78362 688 aaKnown RBP8.58□□□□□ -1.04
PTPRR-207ENST00000548220 PLCB2Q00722 1185 aa8.58□□□□□ -1.04
PTPRR-207ENST00000548220 RNF166Q96A37 237 aaPredicted RBP8.58□□□□□ -1.04
PTPRR-207ENST00000548220 NUDT16Q96DE0 195 aaKnown RBP8.58□□□□□ -1.04
PTPRR-207ENST00000548220 TERF2IPQ9NYB0 399 aa8.58□□□□□ -1.04
PTPRR-207ENST00000548220 MINK1Q8N4C8 1332 aaPredicted RBP8.57□□□□□ -1.04
PTPRR-207ENST00000548220 KTN1Q86UP2 1357 aaKnown RBP8.57□□□□□ -1.04
PTPRR-207ENST00000548220 NPC1L1Q9UHC9 1359 aa8.57□□□□□ -1.04
PTPRR-207ENST00000548220 TOPAZ1Q8N9V7 1692 aa8.57□□□□□ -1.04
PTPRR-207ENST00000548220 C11orf95C9JLR9 678 aaPredicted RBP8.57□□□□□ -1.04
PTPRR-207ENST00000548220 PTGER2P43116 358 aa8.57□□□□□ -1.04
PTPRR-207ENST00000548220 BCL11BQ9C0K0 894 aaPredicted RBP8.57□□□□□ -1.04
PTPRR-207ENST00000548220 POLR3AO14802 1390 aaPredicted RBP8.56□□□□□ -1.04
PTPRR-207ENST00000548220 ANKRD36BQ8N2N9 1353 aa8.56□□□□□ -1.04
PTPRR-207ENST00000548220 KIF1AQ12756 1690 aa8.56□□□□□ -1.04
PTPRR-207ENST00000548220 C14orf37Q86TY3 774 aa8.56□□□□□ -1.04
PTPRR-207ENST00000548220 MYOM1P52179 1685 aa8.55□□□□□ -1.04
PTPRR-207ENST00000548220 CPSF1Q10570 1443 aaKnown RBP8.55□□□□□ -1.04
PTPRR-207ENST00000548220 SAFB2Q14151 953 aaKnown RBP eCLIP8.55□□□□□ -1.04
PTPRR-207ENST00000548220 USP32Q8NFA0 1604 aa8.55□□□□□ -1.04
PTPRR-207ENST00000548220 RGPD8O14715 1765 aaPredicted RBP8.55□□□□□ -1.04
PTPRR-207ENST00000548220 AKAP12Q02952 1782 aa8.55□□□□□ -1.04
PTPRR-207ENST00000548220 PER1O15534 1290 aaPredicted RBP8.54□□□□□ -1.04
PTPRR-207ENST00000548220 HDGFL2Q7Z4V5 671 aaPredicted RBP8.54□□□□□ -1.04
PTPRR-207ENST00000548220 FBXO22Q8NEZ5 403 aa8.54□□□□□ -1.04
PTPRR-207ENST00000548220 HIRIP3Q9BW71 556 aaPredicted RBP8.54□□□□□ -1.04
PTPRR-207ENST00000548220 SLAIN2Q9P270 581 aa8.54□□□□□ -1.04
PTPRR-207ENST00000548220 STK24Q9Y6E0 443 aa8.54□□□□□ -1.04
PTPRR-207ENST00000548220 NSD2O96028 1365 aa8.54□□□□□ -1.04
PTPRR-207ENST00000548220 MST1RQ04912 1400 aa8.54□□□□□ -1.04
PTPRR-207ENST00000548220 C1orf167Q5SNV9 1468 aa8.54□□□□□ -1.04
PTPRR-207ENST00000548220 ECM2O94769 699 aaPredicted RBP8.53□□□□□ -1.04
PTPRR-207ENST00000548220 PPIP5K1Q6PFW1 1433 aa8.53□□□□□ -1.04
PTPRR-207ENST00000548220 MON2Q7Z3U7 1717 aa8.53□□□□□ -1.04
PTPRR-207ENST00000548220 TOM1O60784 492 aa8.52□□□□□ -1.05
PTPRR-207ENST00000548220 ARSIQ5FYB1 569 aa8.52□□□□□ -1.05
PTPRR-207ENST00000548220 SLC12A5Q9H2X9 1139 aa8.52□□□□□ -1.05
PTPRR-207ENST00000548220 CABP1Q9NZU7 370 aa8.52□□□□□ -1.05
PTPRR-207ENST00000548220 TTC21AQ8NDW8 1320 aa8.52□□□□□ -1.05
PTPRR-207ENST00000548220 PRR36Q9H6K5 1346 aa8.52□□□□□ -1.05
PTPRR-207ENST00000548220 EDC4Q6P2E9 1401 aaKnown RBP8.52□□□□□ -1.05
PTPRR-207ENST00000548220 STK25O00506 426 aa8.51□□□□□ -1.05
PTPRR-207ENST00000548220 CGNL1Q0VF96 1302 aa8.51□□□□□ -1.05
PTPRR-207ENST00000548220 NPHP3Q7Z494 1330 aa8.51□□□□□ -1.05
PTPRR-207ENST00000548220 PANK3Q9H999 370 aa8.51□□□□□ -1.05
PTPRR-207ENST00000548220 CD163L1Q9NR16 1453 aa8.51□□□□□ -1.05
PTPRR-207ENST00000548220 KNSTRNQ9Y448 316 aa8.51□□□□□ -1.05
PTPRR-207ENST00000548220 SSH2Q76I76 1423 aa8.5□□□□□ -1.05
PTPRR-207ENST00000548220 ACEP12821 1306 aa8.5□□□□□ -1.05
PTPRR-207ENST00000548220 UBAP1LF5GYI3 381 aa8.5□□□□□ -1.05
PTPRR-207ENST00000548220 PSME1Q06323 249 aa8.5□□□□□ -1.05
PTPRR-207ENST00000548220 DDX10Q13206 875 aaKnown RBP8.5□□□□□ -1.05
PTPRR-207ENST00000548220 TMC1Q8TDI8 760 aa8.5□□□□□ -1.05
PTPRR-207ENST00000548220 USP54Q70EL1 1684 aa8.5□□□□□ -1.05
PTPRR-207ENST00000548220 USP6P35125 1406 aa8.5□□□□□ -1.05
PTPRR-207ENST00000548220 A0A1W2PP64 1363 aa8.5□□□□□ -1.05
PTPRR-207ENST00000548220 SBNO1A3KN83 1393 aa8.5□□□□□ -1.05
PTPRR-207ENST00000548220 PIP4K2BP78356 416 aa8.49□□□□□ -1.05
PTPRR-207ENST00000548220 ESCO1Q5FWF5 840 aa8.49□□□□□ -1.05
PTPRR-207ENST00000548220 NGDNQ8NEJ9 315 aaKnown RBP8.49□□□□□ -1.05
PTPRR-207ENST00000548220 FBXO41Q8TF61 875 aa8.49□□□□□ -1.05
PTPRR-207ENST00000548220 MFRPQ9BY79 579 aa8.49□□□□□ -1.05
PTPRR-207ENST00000548220 RALBP1Q15311 655 aa8.48□□□□□ -1.05
PTPRR-207ENST00000548220 CARD14Q9BXL6 1004 aa8.48□□□□□ -1.05
PTPRR-207ENST00000548220 ANKRD26Q9UPS8 1709 aa8.48□□□□□ -1.05
PTPRR-207ENST00000548220 USP31Q70CQ4 1352 aa8.48□□□□□ -1.05
PTPRR-207ENST00000548220 NHSL1Q5SYE7 1610 aa8.48□□□□□ -1.05
PTPRR-207ENST00000548220 HAP1P54257 671 aaPredicted RBP8.48□□□□□ -1.05
PTPRR-207ENST00000548220 DIEXFQ68CQ4 756 aaKnown RBP8.48□□□□□ -1.05
PTPRR-207ENST00000548220 NRKQ7Z2Y5 1582 aa8.47□□□□□ -1.05
PTPRR-207ENST00000548220 AHDC1Q5TGY3 1603 aaPredicted RBP8.47□□□□□ -1.05
PTPRR-207ENST00000548220 SOS2Q07890 1332 aaPredicted RBP8.47□□□□□ -1.05
PTPRR-207ENST00000548220 KIF3CO14782 793 aa8.47□□□□□ -1.05
PTPRR-207ENST00000548220 BRINP3Q76B58 766 aa8.47□□□□□ -1.05
PTPRR-207ENST00000548220 KIF20BQ96Q89 1820 aa8.46□□□□□ -1.06
PTPRR-207ENST00000548220 TTC21BQ7Z4L5 1316 aa8.46□□□□□ -1.06
PTPRR-207ENST00000548220 TRPM3Q9HCF6 1732 aaPredicted RBP8.46□□□□□ -1.06
PTPRR-207ENST00000548220 FYB1O15117 783 aa8.46□□□□□ -1.06
PTPRR-207ENST00000548220 PBX2P40425 430 aa8.46□□□□□ -1.06
PTPRR-207ENST00000548220 ANKRD13DQ6ZTN6 518 aa8.46□□□□□ -1.06
PTPRR-207ENST00000548220 ORAI2Q96SN7 254 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms