RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 LAMC1P11047 1609 aa16.02■□□□□ 0.15
BRF1-210ENST00000547374 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.02■□□□□ 0.15
BRF1-210ENST00000547374 MAP4K4O95819 1239 aaPredicted RBP16.01■□□□□ 0.15
BRF1-210ENST00000547374 MEIS3Q99687 375 aa16.01■□□□□ 0.15
BRF1-210ENST00000547374 PTMAP06454 111 aaKnown RBP16.01■□□□□ 0.15
BRF1-210ENST00000547374 RTF1Q92541 710 aaKnown RBP16.01■□□□□ 0.15
BRF1-210ENST00000547374 MAP3K4Q9Y6R4 1608 aa16■□□□□ 0.15
BRF1-210ENST00000547374 NEK4P51957 841 aa16■□□□□ 0.15
BRF1-210ENST00000547374 ALDH1L2Q3SY69 923 aa16■□□□□ 0.15
BRF1-210ENST00000547374 RNF17Q9BXT8 1623 aaKnown RBP16■□□□□ 0.15
BRF1-210ENST00000547374 RBM10P98175 930 aaKnown RBP16■□□□□ 0.15
BRF1-210ENST00000547374 ANO2Q9NQ90 1003 aa16■□□□□ 0.15
BRF1-210ENST00000547374 FOXO3O43524 673 aa15.99■□□□□ 0.15
BRF1-210ENST00000547374 GSPT1P15170 499 aaKnown RBP15.99■□□□□ 0.15
BRF1-210ENST00000547374 NLRP1Q9C000 1473 aa15.99■□□□□ 0.15
BRF1-210ENST00000547374 SLC52A1Q9NWF4 448 aa15.99■□□□□ 0.15
BRF1-210ENST00000547374 BAG4O95429 457 aaKnown RBP15.98■□□□□ 0.15
BRF1-210ENST00000547374 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
BRF1-210ENST00000547374 ABCC11Q96J66 1382 aa15.98■□□□□ 0.15
BRF1-210ENST00000547374 MYOM1P52179 1685 aa15.98■□□□□ 0.15
BRF1-210ENST00000547374 UPF3BQ9BZI7 483 aaKnown RBP15.98■□□□□ 0.15
BRF1-210ENST00000547374 GDPD2Q9HCC8 539 aa15.98■□□□□ 0.15
BRF1-210ENST00000547374 RBM25P49756 843 aaKnown RBP15.98■□□□□ 0.15
BRF1-210ENST00000547374 PLEKHM2Q8IWE5 1019 aa15.98■□□□□ 0.15
BRF1-210ENST00000547374 NUDT16Q96DE0 195 aaKnown RBP15.98■□□□□ 0.15
BRF1-210ENST00000547374 CLASP1Q7Z460 1538 aa15.97■□□□□ 0.15
BRF1-210ENST00000547374 SBNO2Q9Y2G9 1366 aa15.97■□□□□ 0.15
BRF1-210ENST00000547374 ERBB4Q15303 1308 aa15.97■□□□□ 0.15
BRF1-210ENST00000547374 ST18O60284 1047 aa15.97■□□□□ 0.15
BRF1-210ENST00000547374 HSP90AB2PQ58FF8 381 aa15.97■□□□□ 0.15
BRF1-210ENST00000547374 PPIP5K1Q6PFW1 1433 aa15.97■□□□□ 0.15
BRF1-210ENST00000547374 SDSP20132 328 aa15.97■□□□□ 0.15
BRF1-210ENST00000547374 FKBP5Q13451 457 aaPredicted RBP15.97■□□□□ 0.15
BRF1-210ENST00000547374 INTS3Q68E01 1043 aaKnown RBP15.97■□□□□ 0.15
BRF1-210ENST00000547374 TSPYL4Q9UJ04 414 aa15.97■□□□□ 0.15
BRF1-210ENST00000547374 CEP152O94986 1710 aa15.97■□□□□ 0.15
BRF1-210ENST00000547374 RAB3GAP1Q15042 981 aa15.97■□□□□ 0.15
BRF1-210ENST00000547374 FSD2A1L4K1 749 aa15.96■□□□□ 0.15
BRF1-210ENST00000547374 IL1RAPL2Q9NP60 686 aa15.96■□□□□ 0.15
BRF1-210ENST00000547374 LMOD3Q0VAK6 560 aa15.96■□□□□ 0.14
BRF1-210ENST00000547374 SKOR2Q2VWA4 1001 aaPredicted RBP15.96■□□□□ 0.14
BRF1-210ENST00000547374 DNTTIP2Q5QJE6 756 aaKnown RBP15.96■□□□□ 0.14
BRF1-210ENST00000547374 EIF2S2P20042 333 aaKnown RBP15.95■□□□□ 0.14
BRF1-210ENST00000547374 CFAP44Q96MT7 982 aa15.95■□□□□ 0.14
BRF1-210ENST00000547374 FAM69CQ0P6D2 419 aa15.95■□□□□ 0.14
BRF1-210ENST00000547374 KIF2CQ99661 725 aa15.95■□□□□ 0.14
BRF1-210ENST00000547374 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
BRF1-210ENST00000547374 IFT57Q9NWB7 429 aa15.95■□□□□ 0.14
BRF1-210ENST00000547374 G2E3Q7L622 706 aa15.94■□□□□ 0.14
BRF1-210ENST00000547374 SLC26A8Q96RN1 970 aa15.94■□□□□ 0.14
BRF1-210ENST00000547374 MYOM2P54296 1465 aa15.94■□□□□ 0.14
BRF1-210ENST00000547374 TET3O43151 1660 aa15.94■□□□□ 0.14
BRF1-210ENST00000547374 IL16Q14005 1332 aa15.94■□□□□ 0.14
BRF1-210ENST00000547374 AMPHP49418 695 aa15.94■□□□□ 0.14
BRF1-210ENST00000547374 NSD2O96028 1365 aa15.94■□□□□ 0.14
BRF1-210ENST00000547374 KIF1BO60333 1816 aa15.94■□□□□ 0.14
BRF1-210ENST00000547374 SYCE3A1L190 88 aa15.94■□□□□ 0.14
BRF1-210ENST00000547374 DDX54Q8TDD1 881 aaKnown RBP15.94■□□□□ 0.14
BRF1-210ENST00000547374 R3HCC1Q9Y3T6 440 aaKnown RBP15.94■□□□□ 0.14
BRF1-210ENST00000547374 SNX21Q969T3 373 aa15.93■□□□□ 0.14
BRF1-210ENST00000547374 FAM13BQ9NYF5 915 aa15.93■□□□□ 0.14
BRF1-210ENST00000547374 GLIPR1L2Q4G1C9 344 aa15.93■□□□□ 0.14
BRF1-210ENST00000547374 TTC22Q5TAA0 569 aa15.93■□□□□ 0.14
BRF1-210ENST00000547374 STK31Q9BXU1 1019 aa15.93■□□□□ 0.14
BRF1-210ENST00000547374 CLCN1P35523 988 aa15.92■□□□□ 0.14
BRF1-210ENST00000547374 RABEP1Q15276 862 aa15.92■□□□□ 0.14
BRF1-210ENST00000547374 CHMP3Q9Y3E7 222 aa15.92■□□□□ 0.14
BRF1-210ENST00000547374 IL13P35225 146 aa15.92■□□□□ 0.14
BRF1-210ENST00000547374 OS9Q13438 667 aaPredicted RBP15.92■□□□□ 0.14
BRF1-210ENST00000547374 NGDNQ8NEJ9 315 aaKnown RBP15.92■□□□□ 0.14
BRF1-210ENST00000547374 LMOD2Q6P5Q4 547 aa15.91■□□□□ 0.14
BRF1-210ENST00000547374 KIAA1211Q6ZU35 1233 aa15.91■□□□□ 0.14
BRF1-210ENST00000547374 IQSEC2Q5JU85 1478 aa15.91■□□□□ 0.14
BRF1-210ENST00000547374 XPCQ01831 940 aaPredicted RBP15.91■□□□□ 0.14
BRF1-210ENST00000547374 WASLO00401 505 aaPredicted RBP15.91■□□□□ 0.14
BRF1-210ENST00000547374 CIZ1Q9ULV3 898 aaPredicted RBP15.91■□□□□ 0.14
BRF1-210ENST00000547374 HMMRO75330 724 aa15.9■□□□□ 0.14
BRF1-210ENST00000547374 CCDC61Q9Y6R9 512 aa15.9■□□□□ 0.14
BRF1-210ENST00000547374 REC8O95072 547 aa15.9■□□□□ 0.14
BRF1-210ENST00000547374 RBM33Q96EV2 1170 aaKnown RBP15.9■□□□□ 0.14
BRF1-210ENST00000547374 TAOK2Q9UL54 1235 aa15.9■□□□□ 0.14
BRF1-210ENST00000547374 YTHDC2Q9H6S0 1430 aaKnown RBP15.9■□□□□ 0.14
BRF1-210ENST00000547374 PRIM1P49642 420 aaKnown RBP15.89■□□□□ 0.13
BRF1-210ENST00000547374 NUTM1Q86Y26 1132 aa15.89■□□□□ 0.13
BRF1-210ENST00000547374 EFCAB6Q5THR3 1501 aa15.89■□□□□ 0.13
BRF1-210ENST00000547374 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.89■□□□□ 0.13
BRF1-210ENST00000547374 NUCB2P80303 420 aa15.89■□□□□ 0.13
BRF1-210ENST00000547374 EIF4A2Q14240 407 aaKnown RBP15.89■□□□□ 0.13
BRF1-210ENST00000547374 CEP85Q6P2H3 762 aa15.89■□□□□ 0.13
BRF1-210ENST00000547374 USP26Q9BXU7 913 aa15.89■□□□□ 0.13
BRF1-210ENST00000547374 TULP4Q9NRJ4 1543 aa15.89■□□□□ 0.13
BRF1-210ENST00000547374 BCL11BQ9C0K0 894 aaPredicted RBP15.88■□□□□ 0.13
BRF1-210ENST00000547374 DCTPP1Q9H773 170 aa15.88■□□□□ 0.13
BRF1-210ENST00000547374 MROH2AA6NES4 1674 aa15.88■□□□□ 0.13
BRF1-210ENST00000547374 USHBP1Q8N6Y0 703 aa15.88■□□□□ 0.13
BRF1-210ENST00000547374 PPRC1Q5VV67 1664 aaKnown RBP15.88■□□□□ 0.13
BRF1-210ENST00000547374 QRICH2Q9H0J4 1663 aa15.88■□□□□ 0.13
BRF1-210ENST00000547374 ZSCAN23Q3MJ62 389 aa15.87■□□□□ 0.13
BRF1-210ENST00000547374 AK9Q5TCS8 1911 aa15.87■□□□□ 0.13
BRF1-210ENST00000547374 ERC2O15083 957 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms