RNA–Protein interactions for RNA: ENST00000546407.1

CFTR-207, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 1 (best)

Gene CFTR, Length 222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-207ENST00000546407 MPHOSPH10O00566 681 aaKnown RBP2.41□□□□□ -2.02
CFTR-207ENST00000546407 PRC1O43663 620 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 KIF5CO60282 957 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 HIP1RO75146 1068 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 VAMP4O75379 141 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 GIGYF1O75420 1035 aaPredicted RBP2.41□□□□□ -2.02
CFTR-207ENST00000546407 RGS20O76081 388 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 S100BP04271 92 aaPredicted RBP2.41□□□□□ -2.02
CFTR-207ENST00000546407 CCDC172P0C7W6 258 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 ZNF853P0CG23 659 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 FOSL1P15407 271 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 EVA1CP58658 441 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 PSMD2Q13200 908 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 TMED1Q13445 227 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 SAFB2Q14151 953 aaKnown RBP eCLIP2.41□□□□□ -2.02
CFTR-207ENST00000546407 KCTD2Q14681 263 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 COL19A1Q14993 1142 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 MAPRE1Q15691 268 aaKnown RBP2.41□□□□□ -2.02
CFTR-207ENST00000546407 PLEKHG6Q3KR16 790 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 SWT1Q5T5J6 900 aaKnown RBP2.41□□□□□ -2.02
CFTR-207ENST00000546407 C1QTNF12Q5T7M4 302 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 RNF187Q5TA31 235 aaPredicted RBP2.41□□□□□ -2.02
CFTR-207ENST00000546407 CCSAPQ6IQ19 270 aaPredicted RBP2.41□□□□□ -2.02
CFTR-207ENST00000546407 CTR9Q6PD62 1173 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 PABPN1Q86U42 306 aaKnown RBP eCLIP2.41□□□□□ -2.02
CFTR-207ENST00000546407 LCA5Q86VQ0 697 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 DZIP3Q86Y13 1208 aaKnown RBP2.41□□□□□ -2.02
CFTR-207ENST00000546407 NPAS4Q8IUM7 802 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 LMNTD2Q8IXW0 634 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 SAMD3Q8N6K7 520 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 SVIPQ8NHG7 77 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 RSPH1Q8WYR4 309 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 RELTQ969Z4 430 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 CCDC47Q96A33 483 aaKnown RBP2.41□□□□□ -2.02
CFTR-207ENST00000546407 ZNF512BQ96KM6 892 aaPredicted RBP2.41□□□□□ -2.02
CFTR-207ENST00000546407 SPACA7Q96KW9 195 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 ARPC5LQ9BPX5 153 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 SEZ6LQ9BYH1 1024 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 LNPKQ9C0E8 428 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 SUN2Q9UH99 717 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 KNSTRNQ9Y448 316 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 TBX22Q9Y458 520 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 DMRT2Q9Y5R5 561 aa2.41□□□□□ -2.02
CFTR-207ENST00000546407 PABPN1LA6NDY0 278 aaKnown RBP2.4□□□□□ -2.03
CFTR-207ENST00000546407 SEMA3EO15041 775 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 NPHP1O15259 732 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 TBC1D12O60347 775 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 FOSP01100 380 aaPredicted RBP2.4□□□□□ -2.03
CFTR-207ENST00000546407 VIL1P09327 827 aaKnown RBP2.4□□□□□ -2.03
CFTR-207ENST00000546407 CT47B1P0C2W7 299 aaPredicted RBP2.4□□□□□ -2.03
CFTR-207ENST00000546407 CCDC159P0C7I6 412 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 SETSIPP0DME0 302 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 KCNA2P16389 499 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 RPL17P18621 184 aaKnown RBP2.4□□□□□ -2.03
CFTR-207ENST00000546407 CLCN1P35523 988 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 MAGEA8P43361 318 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 TRPC1P48995 793 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 IFT88Q13099 833 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 DHX8Q14562 1220 aaKnown RBP2.4□□□□□ -2.03
CFTR-207ENST00000546407 MSL1Q68DK7 614 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 B4GALNT3Q6L9W6 998 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.4□□□□□ -2.03
CFTR-207ENST00000546407 UBE2Q1Q7Z7E8 422 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 TTC30BQ8N4P2 665 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 NGEFQ8N5V2 710 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 KRI1Q8N9T8 703 aaKnown RBP2.4□□□□□ -2.03
CFTR-207ENST00000546407 ACRBPQ8NEB7 543 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 PPM1EQ8WY54 764 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 GOLGA1Q92805 767 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 ERCC4Q92889 916 aaPredicted RBP2.4□□□□□ -2.03
CFTR-207ENST00000546407 SMARCC1Q92922 1105 aaPredicted RBP2.4□□□□□ -2.03
CFTR-207ENST00000546407 BHMTQ93088 406 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 ARMC5Q96C12 935 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 IL17RAQ96F46 866 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 PCMTD1Q96MG8 357 aaPredicted RBP2.4□□□□□ -2.03
CFTR-207ENST00000546407 CEP89Q96ST8 783 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 NCAPGQ9BPX3 1015 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 BCL2L13Q9BXK5 485 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 TEX13AQ9BXU3 409 aaPredicted RBP2.4□□□□□ -2.03
CFTR-207ENST00000546407 TBC1D2Q9BYX2 928 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 NUCKS1Q9H1E3 243 aaKnown RBP2.4□□□□□ -2.03
CFTR-207ENST00000546407 ZHX3Q9H4I2 956 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 SPC25Q9HBM1 224 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 CASS4Q9NQ75 786 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 CHCHD3Q9NX63 227 aaKnown RBP2.4□□□□□ -2.03
CFTR-207ENST00000546407 UTP6Q9NYH9 597 aaKnown RBP2.4□□□□□ -2.03
CFTR-207ENST00000546407 DONSONQ9NYP3 566 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 SFMBT1Q9UHJ3 866 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 LZTS1Q9Y250 596 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 CTDP1Q9Y5B0 961 aaPredicted RBP2.4□□□□□ -2.03
CFTR-207ENST00000546407 PAXBP1Q9Y5B6 917 aa2.4□□□□□ -2.03
CFTR-207ENST00000546407 ANKRD33BA6NCL7 494 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 HTATSF1O43719 755 aaKnown RBP2.39□□□□□ -2.03
CFTR-207ENST00000546407 TPPPO94811 219 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 FGAP02671 866 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 TPM3P06753 285 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 HNRNPCP07910 306 aaKnown RBP eCLIP2.39□□□□□ -2.03
CFTR-207ENST00000546407 CCDC175P0C221 793 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 FAM163BP0C2L3 166 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 NBPF7P0C2Y1 421 aaPredicted RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms