RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 API5Q9BZZ5 524 aaKnown RBP12.04□□□□□ -0.48
TRAF1-203ENST00000546084 DUOX2Q9NRD8 1548 aa12.04□□□□□ -0.48
TRAF1-203ENST00000546084 FCHSD2O94868 740 aa12.04□□□□□ -0.48
TRAF1-203ENST00000546084 LMOD3Q0VAK6 560 aa12.04□□□□□ -0.48
TRAF1-203ENST00000546084 CAVIN1Q6NZI2 390 aaKnown RBP12.04□□□□□ -0.48
TRAF1-203ENST00000546084 JARID2Q92833 1246 aaPredicted RBP12.03□□□□□ -0.48
TRAF1-203ENST00000546084 MEIS3Q99687 375 aa12.03□□□□□ -0.48
TRAF1-203ENST00000546084 CHMP4BQ9H444 224 aaKnown RBP12.03□□□□□ -0.48
TRAF1-203ENST00000546084 POLR3AO14802 1390 aaPredicted RBP12.03□□□□□ -0.48
TRAF1-203ENST00000546084 NPC1L1Q9UHC9 1359 aa12.03□□□□□ -0.48
TRAF1-203ENST00000546084 NUTM1Q86Y26 1132 aa12.03□□□□□ -0.48
TRAF1-203ENST00000546084 SURF6O75683 361 aaKnown RBP12.03□□□□□ -0.48
TRAF1-203ENST00000546084 CCDC27Q2M243 656 aa12.03□□□□□ -0.48
TRAF1-203ENST00000546084 TULP1O00294 542 aaPredicted RBP12.02□□□□□ -0.48
TRAF1-203ENST00000546084 PRPF40AO75400 957 aaKnown RBP12.02□□□□□ -0.48
TRAF1-203ENST00000546084 SSFA2P28290 1259 aa12.02□□□□□ -0.48
TRAF1-203ENST00000546084 PPFIA3O75145 1194 aa12.02□□□□□ -0.49
TRAF1-203ENST00000546084 PSME1Q06323 249 aa12.02□□□□□ -0.49
TRAF1-203ENST00000546084 TEFQ10587 303 aa12.02□□□□□ -0.49
TRAF1-203ENST00000546084 TAF7LQ5H9L4 462 aa12.02□□□□□ -0.49
TRAF1-203ENST00000546084 HMMRO75330 724 aa12.02□□□□□ -0.49
TRAF1-203ENST00000546084 SIL1Q9H173 461 aa12.02□□□□□ -0.49
TRAF1-203ENST00000546084 ESCO1Q5FWF5 840 aa12.01□□□□□ -0.49
TRAF1-203ENST00000546084 TBC1D9Q6ZT07 1266 aa12.01□□□□□ -0.49
TRAF1-203ENST00000546084 GDPD2Q9HCC8 539 aa12.01□□□□□ -0.49
TRAF1-203ENST00000546084 ESPNB1AK53 854 aa12.01□□□□□ -0.49
TRAF1-203ENST00000546084 KDM4AO75164 1064 aa12.01□□□□□ -0.49
TRAF1-203ENST00000546084 KIAA1211Q6ZU35 1233 aa12.01□□□□□ -0.49
TRAF1-203ENST00000546084 WASLO00401 505 aaPredicted RBP12.01□□□□□ -0.49
TRAF1-203ENST00000546084 PIP4K2AP48426 406 aaPredicted RBP12.01□□□□□ -0.49
TRAF1-203ENST00000546084 TNPO1Q92973 898 aaKnown RBP12.01□□□□□ -0.49
TRAF1-203ENST00000546084 ATP10AO60312 1499 aa12□□□□□ -0.49
TRAF1-203ENST00000546084 CDC45O75419 566 aa12□□□□□ -0.49
TRAF1-203ENST00000546084 C9orf78Q9NZ63 289 aaPredicted RBP12□□□□□ -0.49
TRAF1-203ENST00000546084 ST18O60284 1047 aa11.99□□□□□ -0.49
TRAF1-203ENST00000546084 G2E3Q7L622 706 aa11.99□□□□□ -0.49
TRAF1-203ENST00000546084 ZC3H6P61129 1189 aaKnown RBP11.99□□□□□ -0.49
TRAF1-203ENST00000546084 ABCC2Q92887 1545 aa11.99□□□□□ -0.49
TRAF1-203ENST00000546084 VAMP4O75379 141 aa11.99□□□□□ -0.49
TRAF1-203ENST00000546084 DHX37Q8IY37 1157 aaKnown RBP11.99□□□□□ -0.49
TRAF1-203ENST00000546084 FBXW7Q969H0 707 aa11.99□□□□□ -0.49
TRAF1-203ENST00000546084 PTPRTO14522 1441 aa11.98□□□□□ -0.49
TRAF1-203ENST00000546084 MSNP26038 577 aaKnown RBP11.98□□□□□ -0.49
TRAF1-203ENST00000546084 CLCN1P35523 988 aa11.98□□□□□ -0.49
TRAF1-203ENST00000546084 HDGFL1Q5TGJ6 251 aa11.98□□□□□ -0.49
TRAF1-203ENST00000546084 MAST1Q9Y2H9 1570 aa11.98□□□□□ -0.49
TRAF1-203ENST00000546084 ACEP12821 1306 aa11.98□□□□□ -0.49
TRAF1-203ENST00000546084 MCCP23508 829 aa11.97□□□□□ -0.49
TRAF1-203ENST00000546084 SYNMO15061 1565 aa11.97□□□□□ -0.49
TRAF1-203ENST00000546084 MYL6BP14649 208 aa11.97□□□□□ -0.49
TRAF1-203ENST00000546084 MPRIPQ6WCQ1 1025 aa11.97□□□□□ -0.49
TRAF1-203ENST00000546084 ZBTB40Q9NUA8 1239 aa11.97□□□□□ -0.49
TRAF1-203ENST00000546084 ERVK-7P63135 1459 aa11.97□□□□□ -0.49
TRAF1-203ENST00000546084 RPGRIP1LQ68CZ1 1315 aa11.97□□□□□ -0.49
TRAF1-203ENST00000546084 UBTFL1P0CB47 393 aaPredicted RBP11.96□□□□□ -0.49
TRAF1-203ENST00000546084 HDAC1Q13547 482 aaPredicted RBP11.96□□□□□ -0.49
TRAF1-203ENST00000546084 FSD2A1L4K1 749 aa11.96□□□□□ -0.49
TRAF1-203ENST00000546084 INTS3Q68E01 1043 aaKnown RBP11.96□□□□□ -0.49
TRAF1-203ENST00000546084 CCDC85AQ96PX6 553 aaPredicted RBP11.96□□□□□ -0.49
TRAF1-203ENST00000546084 NLRP2Q9NX02 1062 aa11.96□□□□□ -0.49
TRAF1-203ENST00000546084 AMOTL2Q9Y2J4 779 aa11.96□□□□□ -0.49
TRAF1-203ENST00000546084 ANKRD36BQ8N2N9 1353 aa11.96□□□□□ -0.49
TRAF1-203ENST00000546084 NPATQ14207 1427 aa11.96□□□□□ -0.5
TRAF1-203ENST00000546084 EIF4A2Q14240 407 aaKnown RBP11.96□□□□□ -0.5
TRAF1-203ENST00000546084 SKOR2Q2VWA4 1001 aaPredicted RBP11.96□□□□□ -0.5
TRAF1-203ENST00000546084 RBM27Q9P2N5 1060 aaKnown RBP11.96□□□□□ -0.5
TRAF1-203ENST00000546084 CDC42BPBQ9Y5S2 1711 aa11.95□□□□□ -0.5
TRAF1-203ENST00000546084 VPS37CA5D8V6 355 aaPredicted RBP11.95□□□□□ -0.5
TRAF1-203ENST00000546084 NASPP49321 788 aaPredicted RBP11.95□□□□□ -0.5
TRAF1-203ENST00000546084 K7ELQ4 463 aaPredicted RBP11.95□□□□□ -0.5
TRAF1-203ENST00000546084 SMC5Q8IY18 1101 aa11.95□□□□□ -0.5
TRAF1-203ENST00000546084 GAS2L2Q8NHY3 880 aa11.95□□□□□ -0.5
TRAF1-203ENST00000546084 PREX2Q70Z35 1606 aa11.94□□□□□ -0.5
TRAF1-203ENST00000546084 CD2BP2O95400 341 aaKnown RBP11.94□□□□□ -0.5
TRAF1-203ENST00000546084 CT47B1P0C2W7 299 aaPredicted RBP11.94□□□□□ -0.5
TRAF1-203ENST00000546084 CWC27Q6UX04 472 aaKnown RBP11.94□□□□□ -0.5
TRAF1-203ENST00000546084 LRRFIP2Q9Y608 721 aaKnown RBP11.94□□□□□ -0.5
TRAF1-203ENST00000546084 SRGAP3O43295 1099 aa11.94□□□□□ -0.5
TRAF1-203ENST00000546084 ZGPATQ8N5A5 531 aaKnown RBP11.94□□□□□ -0.5
TRAF1-203ENST00000546084 MRPL50Q8N5N7 158 aaKnown RBP11.94□□□□□ -0.5
TRAF1-203ENST00000546084 GOLGA6L4A6NEF3 574 aa11.94□□□□□ -0.5
TRAF1-203ENST00000546084 GAS2L3Q86XJ1 694 aa11.94□□□□□ -0.5
TRAF1-203ENST00000546084 GCC1Q96CN9 775 aa11.94□□□□□ -0.5
TRAF1-203ENST00000546084 NUCB1Q02818 461 aa11.93□□□□□ -0.5
TRAF1-203ENST00000546084 TCEANC2Q96MN5 208 aa11.93□□□□□ -0.5
TRAF1-203ENST00000546084 CFAP44Q96MT7 982 aa11.93□□□□□ -0.5
TRAF1-203ENST00000546084 MYO5CQ9NQX4 1742 aa11.93□□□□□ -0.5
TRAF1-203ENST00000546084 IQGAP3Q86VI3 1631 aa11.93□□□□□ -0.5
TRAF1-203ENST00000546084 UNC13BO14795 1591 aa11.93□□□□□ -0.5
TRAF1-203ENST00000546084 REC8O95072 547 aa11.93□□□□□ -0.5
TRAF1-203ENST00000546084 YEATS2Q9ULM3 1422 aa11.93□□□□□ -0.5
TRAF1-203ENST00000546084 STK3Q13188 491 aa11.93□□□□□ -0.5
TRAF1-203ENST00000546084 LRRC59Q96AG4 307 aaKnown RBP11.93□□□□□ -0.5
TRAF1-203ENST00000546084 KAT6BQ8WYB5 2073 aa11.92□□□□□ -0.5
TRAF1-203ENST00000546084 CLASP1Q7Z460 1538 aa11.92□□□□□ -0.5
TRAF1-203ENST00000546084 SDSP20132 328 aa11.92□□□□□ -0.5
TRAF1-203ENST00000546084 MTHFSDQ2M296 383 aaKnown RBP11.92□□□□□ -0.5
TRAF1-203ENST00000546084 C1orf141Q5JVX7 400 aa11.92□□□□□ -0.5
TRAF1-203ENST00000546084 DIAPH3Q9NSV4 1193 aa11.92□□□□□ -0.5
TRAF1-203ENST00000546084 SPG7Q9UQ90 795 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms