RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 OSBPP22059 807 aa8.38□□□□□ -1.07
SNHG1-225ENST00000545920 PPP2R1AP30153 589 aa8.38□□□□□ -1.07
SNHG1-225ENST00000545920 FAM161AQ3B820 660 aa8.38□□□□□ -1.07
SNHG1-225ENST00000545920 DUSP27Q5VZP5 1158 aa8.38□□□□□ -1.07
SNHG1-225ENST00000545920 PTCD2Q8WV60 388 aaKnown RBP8.38□□□□□ -1.07
SNHG1-225ENST00000545920 PUS7Q96PZ0 661 aaKnown RBP8.38□□□□□ -1.07
SNHG1-225ENST00000545920 FAM117AQ9C073 453 aa8.38□□□□□ -1.07
SNHG1-225ENST00000545920 DEPDC5O75140 1603 aa8.37□□□□□ -1.07
SNHG1-225ENST00000545920 CGNL1Q0VF96 1302 aa8.37□□□□□ -1.07
SNHG1-225ENST00000545920 VWDEQ8N2E2 1590 aa8.37□□□□□ -1.07
SNHG1-225ENST00000545920 PDE3AQ14432 1141 aa8.37□□□□□ -1.07
SNHG1-225ENST00000545920 SPHKAPQ2M3C7 1700 aa8.37□□□□□ -1.07
SNHG1-225ENST00000545920 TET3O43151 1660 aa8.37□□□□□ -1.07
SNHG1-225ENST00000545920 MAPK8IP3Q9UPT6 1336 aa8.36□□□□□ -1.07
SNHG1-225ENST00000545920 PLEKHG3A1L390 1219 aa8.36□□□□□ -1.07
SNHG1-225ENST00000545920 MAP3K9P80192 1104 aa8.36□□□□□ -1.07
SNHG1-225ENST00000545920 SLFN5Q08AF3 891 aa8.36□□□□□ -1.07
SNHG1-225ENST00000545920 RGL3Q3MIN7 710 aa8.36□□□□□ -1.07
SNHG1-225ENST00000545920 OXER1Q8TDS5 423 aa8.36□□□□□ -1.07
SNHG1-225ENST00000545920 CCDC102AQ96A19 550 aa8.36□□□□□ -1.07
SNHG1-225ENST00000545920 CRBNQ96SW2 442 aa8.36□□□□□ -1.07
SNHG1-225ENST00000545920 NKTRP30414 1462 aaKnown RBP8.36□□□□□ -1.07
SNHG1-225ENST00000545920 POLR3AO14802 1390 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-225ENST00000545920 SPAG9O60271 1321 aaKnown RBP8.35□□□□□ -1.07
SNHG1-225ENST00000545920 GRXCR2A6NFK2 248 aa8.35□□□□□ -1.07
SNHG1-225ENST00000545920 GNPATO15228 680 aa8.35□□□□□ -1.07
SNHG1-225ENST00000545920 HIC1Q14526 733 aa8.35□□□□□ -1.07
SNHG1-225ENST00000545920 CC2D1BQ5T0F9 858 aaKnown RBP8.35□□□□□ -1.07
SNHG1-225ENST00000545920 DMRTA1Q5VZB9 504 aa8.35□□□□□ -1.07
SNHG1-225ENST00000545920 ADAMTS8Q9UP79 889 aa8.35□□□□□ -1.07
SNHG1-225ENST00000545920 CEP152O94986 1710 aa8.34□□□□□ -1.07
SNHG1-225ENST00000545920 LMTK2Q8IWU2 1503 aa8.34□□□□□ -1.07
SNHG1-225ENST00000545920 NUTM2FA1L443 756 aa8.34□□□□□ -1.07
SNHG1-225ENST00000545920 NEFMP07197 916 aa8.34□□□□□ -1.07
SNHG1-225ENST00000545920 UPF1Q92900 1129 aaKnown RBP eCLIP8.34□□□□□ -1.07
SNHG1-225ENST00000545920 CDCA7LQ96GN5 454 aa8.34□□□□□ -1.07
SNHG1-225ENST00000545920 RSPH6AQ9H0K4 717 aa8.34□□□□□ -1.07
SNHG1-225ENST00000545920 ZFYVE16Q7Z3T8 1539 aa8.34□□□□□ -1.08
SNHG1-225ENST00000545920 FANCAO15360 1455 aa8.33□□□□□ -1.08
SNHG1-225ENST00000545920 NRXN1Q9ULB1 1477 aa8.33□□□□□ -1.08
SNHG1-225ENST00000545920 FCHSD2O94868 740 aa8.33□□□□□ -1.08
SNHG1-225ENST00000545920 CT47B1P0C2W7 299 aaPredicted RBP8.33□□□□□ -1.08
SNHG1-225ENST00000545920 PSEN2P49810 448 aa8.33□□□□□ -1.08
SNHG1-225ENST00000545920 PARP9Q8IXQ6 854 aa8.33□□□□□ -1.08
SNHG1-225ENST00000545920 GOPCQ9HD26 462 aa8.33□□□□□ -1.08
SNHG1-225ENST00000545920 SETBP1Q9Y6X0 1596 aa8.33□□□□□ -1.08
SNHG1-225ENST00000545920 PLEKHH1Q9ULM0 1364 aa8.33□□□□□ -1.08
SNHG1-225ENST00000545920 MYO3AQ8NEV4 1616 aa8.32□□□□□ -1.08
SNHG1-225ENST00000545920 CCDC27Q2M243 656 aa8.32□□□□□ -1.08
SNHG1-225ENST00000545920 PPP4R3BQ5MIZ7 849 aa8.32□□□□□ -1.08
SNHG1-225ENST00000545920 KDM5AP29375 1690 aaKnown RBP8.32□□□□□ -1.08
SNHG1-225ENST00000545920 NSD2O96028 1365 aa8.32□□□□□ -1.08
SNHG1-225ENST00000545920 RPGRIP1LQ68CZ1 1315 aa8.31□□□□□ -1.08
SNHG1-225ENST00000545920 CNGB1Q14028 1251 aaPredicted RBP8.31□□□□□ -1.08
SNHG1-225ENST00000545920 ADGRL1O94910 1474 aa8.31□□□□□ -1.08
SNHG1-225ENST00000545920 INO80Q9ULG1 1556 aaPredicted RBP8.31□□□□□ -1.08
SNHG1-225ENST00000545920 TRAPPC8Q9Y2L5 1435 aa8.3□□□□□ -1.08
SNHG1-225ENST00000545920 MAP3K4Q9Y6R4 1608 aa8.3□□□□□ -1.08
SNHG1-225ENST00000545920 BECN1Q14457 450 aa8.3□□□□□ -1.08
SNHG1-225ENST00000545920 NPM2Q86SE8 214 aaKnown RBP8.3□□□□□ -1.08
SNHG1-225ENST00000545920 WDR63Q8IWG1 891 aa8.3□□□□□ -1.08
SNHG1-225ENST00000545920 PMFBP1Q8TBY8 1022 aa8.3□□□□□ -1.08
SNHG1-225ENST00000545920 KCTD12Q96CX2 325 aaKnown RBP8.3□□□□□ -1.08
SNHG1-225ENST00000545920 ATP7AQ04656 1500 aa8.29□□□□□ -1.08
SNHG1-225ENST00000545920 CLTCL1P53675 1640 aa8.29□□□□□ -1.08
SNHG1-225ENST00000545920 USP32Q8NFA0 1604 aa8.29□□□□□ -1.08
SNHG1-225ENST00000545920 TBC1D12O60347 775 aa8.29□□□□□ -1.08
SNHG1-225ENST00000545920 FECHP22830 423 aa8.29□□□□□ -1.08
SNHG1-225ENST00000545920 C8orf34Q49A92 452 aa8.29□□□□□ -1.08
SNHG1-225ENST00000545920 ZCCHC11Q5TAX3 1644 aaKnown RBP8.29□□□□□ -1.08
SNHG1-225ENST00000545920 MYOM1P52179 1685 aa8.28□□□□□ -1.08
SNHG1-225ENST00000545920 ERVK-7P63135 1459 aa8.28□□□□□ -1.08
SNHG1-225ENST00000545920 PLIN1O60240 522 aa8.28□□□□□ -1.08
SNHG1-225ENST00000545920 PRIM1P49642 420 aaKnown RBP8.28□□□□□ -1.08
SNHG1-225ENST00000545920 PTGDRQ13258 359 aa8.28□□□□□ -1.08
SNHG1-225ENST00000545920 SALL2Q9Y467 1007 aaPredicted RBP8.28□□□□□ -1.08
SNHG1-225ENST00000545920 EFCAB6Q5THR3 1501 aa8.28□□□□□ -1.08
SNHG1-225ENST00000545920 CENPJQ9HC77 1338 aaPredicted RBP8.28□□□□□ -1.08
SNHG1-225ENST00000545920 EIF5BO60841 1220 aaKnown RBP8.27□□□□□ -1.09
SNHG1-225ENST00000545920 NFKBIBQ15653 356 aa8.27□□□□□ -1.09
SNHG1-225ENST00000545920 DDX12PQ92771 950 aa8.27□□□□□ -1.09
SNHG1-225ENST00000545920 CLUAP1Q96AJ1 413 aa8.27□□□□□ -1.09
SNHG1-225ENST00000545920 CFAP53Q96M91 514 aa8.27□□□□□ -1.09
SNHG1-225ENST00000545920 UPF2Q9HAU5 1272 aaKnown RBP8.27□□□□□ -1.09
SNHG1-225ENST00000545920 ABCA9Q8IUA7 1624 aa8.27□□□□□ -1.09
SNHG1-225ENST00000545920 CHD1O14646 1710 aa8.26□□□□□ -1.09
SNHG1-225ENST00000545920 RGS20O76081 388 aa8.26□□□□□ -1.09
SNHG1-225ENST00000545920 FLIIQ13045 1269 aa8.26□□□□□ -1.09
SNHG1-225ENST00000545920 IFFO2Q5TF58 517 aa8.26□□□□□ -1.09
SNHG1-225ENST00000545920 RUNDC1Q96C34 613 aa8.26□□□□□ -1.09
SNHG1-225ENST00000545920 ANO8Q9HCE9 1232 aaPredicted RBP8.26□□□□□ -1.09
SNHG1-225ENST00000545920 ADGRB3O60242 1522 aa8.25□□□□□ -1.09
SNHG1-225ENST00000545920 APAF1O14727 1248 aa8.25□□□□□ -1.09
SNHG1-225ENST00000545920 ONECUT3O60422 494 aaPredicted RBP8.25□□□□□ -1.09
SNHG1-225ENST00000545920 EVI5O60447 810 aa8.25□□□□□ -1.09
SNHG1-225ENST00000545920 C20orf194Q5TEA3 1177 aa8.25□□□□□ -1.09
SNHG1-225ENST00000545920 KCNK17Q96T54 332 aa8.25□□□□□ -1.09
SNHG1-225ENST00000545920 MYH16Q9H6N6 1097 aa8.25□□□□□ -1.09
SNHG1-225ENST00000545920 VPS9D1Q9Y2B5 631 aa8.25□□□□□ -1.09
SNHG1-225ENST00000545920 LAS1LQ9Y4W2 734 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms