RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 TCP11L2Q8N4U5 519 aa24■■□□□ 1.43
MSLN-202ENST00000545450 ZBTB4Q9P1Z0 1013 aaPredicted RBP24■■□□□ 1.43
MSLN-202ENST00000545450 CDK12Q9NYV4 1490 aaPredicted RBP24■■□□□ 1.43
MSLN-202ENST00000545450 RRP7AQ9Y3A4 280 aaKnown RBP23.98■■□□□ 1.43
MSLN-202ENST00000545450 PIK3C2AO00443 1686 aa23.98■■□□□ 1.43
MSLN-202ENST00000545450 RRS1Q15050 365 aaKnown RBP23.98■■□□□ 1.43
MSLN-202ENST00000545450 KDM4FA0A1W2PPD8 638 aa23.97■■□□□ 1.43
MSLN-202ENST00000545450 SEC24BO95487 1268 aa23.97■■□□□ 1.43
MSLN-202ENST00000545450 TTC21AQ8NDW8 1320 aa23.96■■□□□ 1.43
MSLN-202ENST00000545450 BECN1Q14457 450 aa23.96■■□□□ 1.43
MSLN-202ENST00000545450 NEUROD2Q15784 382 aa23.96■■□□□ 1.43
MSLN-202ENST00000545450 WWC1Q8IX03 1113 aa23.96■■□□□ 1.43
MSLN-202ENST00000545450 PLEKHF1Q96S99 279 aa23.96■■□□□ 1.43
MSLN-202ENST00000545450 STRCP1A6NGW2 1772 aa23.94■■□□□ 1.42
MSLN-202ENST00000545450 PANK1Q8TE04 598 aa23.94■■□□□ 1.42
MSLN-202ENST00000545450 PHF23Q9BUL5 403 aaPredicted RBP23.94■■□□□ 1.42
MSLN-202ENST00000545450 COG6Q9Y2V7 657 aa23.94■■□□□ 1.42
MSLN-202ENST00000545450 HSPA2P54652 639 aa23.93■■□□□ 1.42
MSLN-202ENST00000545450 FAM43AQ8N2R8 423 aa23.93■■□□□ 1.42
MSLN-202ENST00000545450 LRRC7Q96NW7 1537 aa23.93■■□□□ 1.42
MSLN-202ENST00000545450 MARF1Q9Y4F3 1742 aaKnown RBP23.93■■□□□ 1.42
MSLN-202ENST00000545450 USP31Q70CQ4 1352 aa23.93■■□□□ 1.42
MSLN-202ENST00000545450 AAMPQ13685 434 aa23.92■■□□□ 1.42
MSLN-202ENST00000545450 PEAK1Q9H792 1746 aa23.92■■□□□ 1.42
MSLN-202ENST00000545450 C14orf37Q86TY3 774 aa23.91■■□□□ 1.42
MSLN-202ENST00000545450 CANXP27824 592 aaKnown RBP23.9■■□□□ 1.42
MSLN-202ENST00000545450 IL13P35225 146 aa23.9■■□□□ 1.42
MSLN-202ENST00000545450 PHF8Q9UPP1 1060 aa23.9■■□□□ 1.42
MSLN-202ENST00000545450 CCDC27Q2M243 656 aa23.89■■□□□ 1.42
MSLN-202ENST00000545450 USP54Q70EL1 1684 aa23.89■■□□□ 1.42
MSLN-202ENST00000545450 ANTXR1Q9H6X2 564 aa23.89■■□□□ 1.41
MSLN-202ENST00000545450 PROSER2Q86WR7 435 aaPredicted RBP23.88■■□□□ 1.41
MSLN-202ENST00000545450 LMTK3Q96Q04 1460 aa23.88■■□□□ 1.41
MSLN-202ENST00000545450 RARSP54136 660 aaKnown RBP23.87■■□□□ 1.41
MSLN-202ENST00000545450 NCBP3Q53F19 620 aaKnown RBP23.87■■□□□ 1.41
MSLN-202ENST00000545450 RSPH6AQ9H0K4 717 aa23.87■■□□□ 1.41
MSLN-202ENST00000545450 FCHSD2O94868 740 aa23.86■■□□□ 1.41
MSLN-202ENST00000545450 TMPOP42166 694 aaKnown RBP23.86■■□□□ 1.41
MSLN-202ENST00000545450 SOX12O15370 315 aa23.85■■□□□ 1.41
MSLN-202ENST00000545450 STRCQ7RTU9 1775 aa23.85■■□□□ 1.41
MSLN-202ENST00000545450 ESCO1Q5FWF5 840 aa23.85■■□□□ 1.41
MSLN-202ENST00000545450 TBC1D32Q96NH3 1257 aa23.85■■□□□ 1.41
MSLN-202ENST00000545450 WDR63Q8IWG1 891 aa23.84■■□□□ 1.41
MSLN-202ENST00000545450 HMOX1P09601 288 aa23.84■■□□□ 1.41
MSLN-202ENST00000545450 PCDHB15Q9Y5E8 787 aa23.84■■□□□ 1.41
MSLN-202ENST00000545450 PRKAR2BP31323 418 aa23.83■■□□□ 1.41
MSLN-202ENST00000545450 SLKQ9H2G2 1235 aaPredicted RBP23.83■■□□□ 1.41
MSLN-202ENST00000545450 PNNQ9H307 717 aaKnown RBP23.83■■□□□ 1.41
MSLN-202ENST00000545450 UPF2Q9HAU5 1272 aaKnown RBP23.82■■□□□ 1.4
MSLN-202ENST00000545450 NLRP6P59044 892 aa23.82■■□□□ 1.4
MSLN-202ENST00000545450 NUTM2GQ5VZR2 741 aa23.81■■□□□ 1.4
MSLN-202ENST00000545450 TRIM35Q9UPQ4 493 aa23.81■■□□□ 1.4
MSLN-202ENST00000545450 MAP3K19Q56UN5 1328 aa23.81■■□□□ 1.4
MSLN-202ENST00000545450 EIF4A2Q14240 407 aaKnown RBP23.81■■□□□ 1.4
MSLN-202ENST00000545450 ORAI2Q96SN7 254 aa23.81■■□□□ 1.4
MSLN-202ENST00000545450 RGPD1P0DJD0 1748 aa23.8■■□□□ 1.4
MSLN-202ENST00000545450 RLBP1P12271 317 aa23.8■■□□□ 1.4
MSLN-202ENST00000545450 ABTB2Q8N961 1025 aa23.79■■□□□ 1.4
MSLN-202ENST00000545450 PDZRN3Q9UPQ7 1066 aa23.79■■□□□ 1.4
MSLN-202ENST00000545450 HSP90AB2PQ58FF8 381 aa23.79■■□□□ 1.4
MSLN-202ENST00000545450 L1TD1Q5T7N2 865 aaKnown RBP23.79■■□□□ 1.4
MSLN-202ENST00000545450 TBC1D2Q9BYX2 928 aa23.79■■□□□ 1.4
MSLN-202ENST00000545450 TMEM94Q12767 1356 aa23.79■■□□□ 1.4
MSLN-202ENST00000545450 PHACTR3Q96KR7 559 aa23.78■■□□□ 1.4
MSLN-202ENST00000545450 C19orf44Q9H6X5 657 aa23.78■■□□□ 1.4
MSLN-202ENST00000545450 RIPK4P57078 832 aa23.78■■□□□ 1.4
MSLN-202ENST00000545450 DLG5Q8TDM6 1919 aa23.77■■□□□ 1.4
MSLN-202ENST00000545450 C1orf167Q5SNV9 1468 aa23.77■■□□□ 1.39
MSLN-202ENST00000545450 SBNO1A3KN83 1393 aa23.77■■□□□ 1.39
MSLN-202ENST00000545450 RWDD1Q9H446 243 aaPredicted RBP23.76■■□□□ 1.39
MSLN-202ENST00000545450 PSME1Q06323 249 aa23.76■■□□□ 1.39
MSLN-202ENST00000545450 FLT4P35916 1363 aa23.75■■□□□ 1.39
MSLN-202ENST00000545450 XIRP1Q702N8 1843 aaKnown RBP23.75■■□□□ 1.39
MSLN-202ENST00000545450 TNNQ9UQP3 1299 aa23.75■■□□□ 1.39
MSLN-202ENST00000545450 KIF1AQ12756 1690 aa23.75■■□□□ 1.39
MSLN-202ENST00000545450 LTN1O94822 1766 aa23.74■■□□□ 1.39
MSLN-202ENST00000545450 TRPM3Q9HCF6 1732 aaPredicted RBP23.74■■□□□ 1.39
MSLN-202ENST00000545450 FOXO3O43524 673 aa23.73■■□□□ 1.39
MSLN-202ENST00000545450 AEBP1Q8IUX7 1158 aa23.72■■□□□ 1.39
MSLN-202ENST00000545450 NCOA3Q9Y6Q9 1424 aa23.72■■□□□ 1.39
MSLN-202ENST00000545450 MST1RQ04912 1400 aa23.72■■□□□ 1.39
MSLN-202ENST00000545450 NFE2L2Q16236 605 aa23.72■■□□□ 1.39
MSLN-202ENST00000545450 DCCP43146 1447 aa23.71■■□□□ 1.39
MSLN-202ENST00000545450 XPCQ01831 940 aaPredicted RBP23.71■■□□□ 1.39
MSLN-202ENST00000545450 EIF5BO60841 1220 aaKnown RBP23.71■■□□□ 1.39
MSLN-202ENST00000545450 MYH16Q9H6N6 1097 aa23.71■■□□□ 1.39
MSLN-202ENST00000545450 NFAT5O94916 1531 aa23.7■■□□□ 1.38
MSLN-202ENST00000545450 AMPHP49418 695 aa23.7■■□□□ 1.38
MSLN-202ENST00000545450 SULT6B1Q6IMI4 303 aa23.7■■□□□ 1.38
MSLN-202ENST00000545450 BCL2L13Q9BXK5 485 aa23.69■■□□□ 1.38
MSLN-202ENST00000545450 ATF3P18847 181 aa23.68■■□□□ 1.38
MSLN-202ENST00000545450 MVPQ14764 893 aaKnown RBP23.68■■□□□ 1.38
MSLN-202ENST00000545450 TSR2Q969E8 191 aaKnown RBP23.68■■□□□ 1.38
MSLN-202ENST00000545450 IL16Q14005 1332 aa23.68■■□□□ 1.38
MSLN-202ENST00000545450 KIF24Q5T7B8 1368 aa23.67■■□□□ 1.38
MSLN-202ENST00000545450 UBE2Q2Q8WVN8 375 aa23.67■■□□□ 1.38
MSLN-202ENST00000545450 RRAGDQ9NQL2 400 aaPredicted RBP23.67■■□□□ 1.38
MSLN-202ENST00000545450 FSD2A1L4K1 749 aa23.67■■□□□ 1.38
MSLN-202ENST00000545450 HOXC9P31274 260 aa23.67■■□□□ 1.38
MSLN-202ENST00000545450 ARHGEF10O15013 1369 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms