RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 TMEM132EQ6IEE7 984 aa9.5□□□□□ -0.89
SPPL3-209ENST00000545209 NLRP13Q86W25 1043 aa9.5□□□□□ -0.89
SPPL3-209ENST00000545209 FAM9BQ8IZU0 186 aa9.5□□□□□ -0.89
SPPL3-209ENST00000545209 ZNF454Q8N9F8 522 aa9.5□□□□□ -0.89
SPPL3-209ENST00000545209 KCNV2Q8TDN2 545 aa9.5□□□□□ -0.89
SPPL3-209ENST00000545209 ARHGEF1Q92888 912 aaKnown RBP9.5□□□□□ -0.89
SPPL3-209ENST00000545209 QRICH2Q9H0J4 1663 aa9.5□□□□□ -0.89
SPPL3-209ENST00000545209 CCDC184Q52MB2 194 aa9.49□□□□□ -0.89
SPPL3-209ENST00000545209 KRTAP3-3Q9BYR6 98 aa9.49□□□□□ -0.89
SPPL3-209ENST00000545209 KRTAP3-2Q9BYR7 98 aa9.49□□□□□ -0.89
SPPL3-209ENST00000545209 EVC2Q86UK5 1308 aa9.49□□□□□ -0.89
SPPL3-209ENST00000545209 PUS7Q96PZ0 661 aaKnown RBP9.48□□□□□ -0.89
SPPL3-209ENST00000545209 NPC1L1Q9UHC9 1359 aa9.48□□□□□ -0.89
SPPL3-209ENST00000545209 NLRP1Q9C000 1473 aa9.47□□□□□ -0.89
SPPL3-209ENST00000545209 ASXL1Q8IXJ9 1541 aa9.47□□□□□ -0.89
SPPL3-209ENST00000545209 ALKQ9UM73 1620 aa9.47□□□□□ -0.89
SPPL3-209ENST00000545209 PBX2P40425 430 aa9.47□□□□□ -0.89
SPPL3-209ENST00000545209 PTGER2P43116 358 aa9.47□□□□□ -0.89
SPPL3-209ENST00000545209 CC2D1BQ5T0F9 858 aaKnown RBP9.47□□□□□ -0.89
SPPL3-209ENST00000545209 MYOM1P52179 1685 aa9.47□□□□□ -0.89
SPPL3-209ENST00000545209 ARHGEF28Q8N1W1 1705 aaKnown RBP9.47□□□□□ -0.89
SPPL3-209ENST00000545209 YTHDC2Q9H6S0 1430 aaKnown RBP9.47□□□□□ -0.89
SPPL3-209ENST00000545209 PCDHGA10Q9Y5H3 936 aa9.46□□□□□ -0.9
SPPL3-209ENST00000545209 ZBED9Q6R2W3 1325 aa9.46□□□□□ -0.9
SPPL3-209ENST00000545209 PHF14O94880 888 aa9.45□□□□□ -0.9
SPPL3-209ENST00000545209 POTEEQ6S8J3 1075 aa9.45□□□□□ -0.9
SPPL3-209ENST00000545209 PNISRQ8TF01 805 aaKnown RBP9.45□□□□□ -0.9
SPPL3-209ENST00000545209 ZDHHC16Q969W1 377 aa9.45□□□□□ -0.9
SPPL3-209ENST00000545209 POGKQ9P215 609 aa9.45□□□□□ -0.9
SPPL3-209ENST00000545209 STK26Q9P289 416 aa9.45□□□□□ -0.9
SPPL3-209ENST00000545209 NINLQ9Y2I6 1382 aa9.45□□□□□ -0.9
SPPL3-209ENST00000545209 ARHGAP33O14559 1287 aa9.44□□□□□ -0.9
SPPL3-209ENST00000545209 NEFLP07196 543 aa9.44□□□□□ -0.9
SPPL3-209ENST00000545209 DDX12PQ92771 950 aa9.44□□□□□ -0.9
SPPL3-209ENST00000545209 AXIN2Q9Y2T1 843 aa9.44□□□□□ -0.9
SPPL3-209ENST00000545209 LRPPRCP42704 1394 aaKnown RBP9.44□□□□□ -0.9
SPPL3-209ENST00000545209 TMEM2Q9UHN6 1383 aa9.44□□□□□ -0.9
SPPL3-209ENST00000545209 PTPRMP28827 1452 aa9.44□□□□□ -0.9
SPPL3-209ENST00000545209 DLC1Q96QB1 1528 aa9.44□□□□□ -0.9
SPPL3-209ENST00000545209 FER1L4A9Z1Z3 1794 aa9.44□□□□□ -0.9
SPPL3-209ENST00000545209 BCL2L12Q9HB09 334 aa9.43□□□□□ -0.9
SPPL3-209ENST00000545209 TULP4Q9NRJ4 1543 aa9.42□□□□□ -0.9
SPPL3-209ENST00000545209 INSRP06213 1382 aa9.42□□□□□ -0.9
SPPL3-209ENST00000545209 ATAD2Q6PL18 1390 aa9.42□□□□□ -0.9
SPPL3-209ENST00000545209 TYW1BQ6NUM6 668 aa9.42□□□□□ -0.9
SPPL3-209ENST00000545209 FBXW7Q969H0 707 aa9.42□□□□□ -0.9
SPPL3-209ENST00000545209 BCANQ96GW7 911 aa9.42□□□□□ -0.9
SPPL3-209ENST00000545209 PRAM1Q96QH2 718 aa9.42□□□□□ -0.9
SPPL3-209ENST00000545209 EPAS1Q99814 870 aa9.42□□□□□ -0.9
SPPL3-209ENST00000545209 ADAM33Q9BZ11 813 aa9.42□□□□□ -0.9
SPPL3-209ENST00000545209 UBR1Q8IWV7 1749 aa9.42□□□□□ -0.9
SPPL3-209ENST00000545209 ABCC11Q96J66 1382 aa9.41□□□□□ -0.9
SPPL3-209ENST00000545209 SRPK2P78362 688 aaKnown RBP9.41□□□□□ -0.9
SPPL3-209ENST00000545209 LSM11P83369 360 aaKnown RBP eCLIP9.41□□□□□ -0.9
SPPL3-209ENST00000545209 SAFB2Q14151 953 aaKnown RBP eCLIP9.41□□□□□ -0.9
SPPL3-209ENST00000545209 EID1Q9Y6B2 187 aa9.41□□□□□ -0.9
SPPL3-209ENST00000545209 C3P01024 1663 aa9.41□□□□□ -0.9
SPPL3-209ENST00000545209 NSD3Q9BZ95 1437 aa9.4□□□□□ -0.9
SPPL3-209ENST00000545209 ANKRD36BQ8N2N9 1353 aa9.4□□□□□ -0.9
SPPL3-209ENST00000545209 CGNL1Q0VF96 1302 aa9.4□□□□□ -0.9
SPPL3-209ENST00000545209 MINK1Q8N4C8 1332 aaPredicted RBP9.4□□□□□ -0.9
SPPL3-209ENST00000545209 PPP2R1AP30153 589 aa9.4□□□□□ -0.9
SPPL3-209ENST00000545209 PSEN2P49810 448 aa9.4□□□□□ -0.9
SPPL3-209ENST00000545209 SETD1AO15047 1707 aaKnown RBP9.39□□□□□ -0.91
SPPL3-209ENST00000545209 NSD2O96028 1365 aa9.39□□□□□ -0.91
SPPL3-209ENST00000545209 PLEKHG1Q9ULL1 1385 aa9.39□□□□□ -0.91
SPPL3-209ENST00000545209 USP32Q8NFA0 1604 aa9.39□□□□□ -0.91
SPPL3-209ENST00000545209 NRXN3Q9Y4C0 1643 aa9.39□□□□□ -0.91
SPPL3-209ENST00000545209 GRXCR2A6NFK2 248 aa9.39□□□□□ -0.91
SPPL3-209ENST00000545209 PTPREP23469 700 aa9.39□□□□□ -0.91
SPPL3-209ENST00000545209 CEBPAP49715 358 aaPredicted RBP9.39□□□□□ -0.91
SPPL3-209ENST00000545209 ANKRD13DQ6ZTN6 518 aa9.39□□□□□ -0.91
SPPL3-209ENST00000545209 KCNK17Q96T54 332 aa9.39□□□□□ -0.91
SPPL3-209ENST00000545209 CARD14Q9BXL6 1004 aa9.39□□□□□ -0.91
SPPL3-209ENST00000545209 SLC12A5Q9H2X9 1139 aa9.39□□□□□ -0.91
SPPL3-209ENST00000545209 FAM135BQ49AJ0 1406 aa9.39□□□□□ -0.91
SPPL3-209ENST00000545209 WDR43Q15061 677 aaKnown RBP eCLIP9.38□□□□□ -0.91
SPPL3-209ENST00000545209 THEMISQ8N1K5 641 aaPredicted RBP9.38□□□□□ -0.91
SPPL3-209ENST00000545209 SIRT1Q96EB6 747 aa9.38□□□□□ -0.91
SPPL3-209ENST00000545209 TERF2IPQ9NYB0 399 aa9.38□□□□□ -0.91
SPPL3-209ENST00000545209 TECPR2O15040 1411 aa9.38□□□□□ -0.91
SPPL3-209ENST00000545209 SLIT1O75093 1534 aa9.37□□□□□ -0.91
SPPL3-209ENST00000545209 KNDC1Q76NI1 1749 aa9.37□□□□□ -0.91
SPPL3-209ENST00000545209 NBR1Q14596 966 aa9.37□□□□□ -0.91
SPPL3-209ENST00000545209 MORC1Q86VD1 984 aa9.37□□□□□ -0.91
SPPL3-209ENST00000545209 TXNDC2Q86VQ3 553 aa9.37□□□□□ -0.91
SPPL3-209ENST00000545209 SPNS2Q8IVW8 549 aa9.37□□□□□ -0.91
SPPL3-209ENST00000545209 METP08581 1390 aa9.37□□□□□ -0.91
SPPL3-209ENST00000545209 CPS1P31327 1500 aa9.36□□□□□ -0.91
SPPL3-209ENST00000545209 ARHGAP23Q9P227 1491 aa9.36□□□□□ -0.91
SPPL3-209ENST00000545209 DMRTA1Q5VZB9 504 aa9.36□□□□□ -0.91
SPPL3-209ENST00000545209 HDGFL2Q7Z4V5 671 aaPredicted RBP9.36□□□□□ -0.91
SPPL3-209ENST00000545209 CDK19Q9BWU1 502 aa9.36□□□□□ -0.91
SPPL3-209ENST00000545209 SUPT16HQ9Y5B9 1047 aaKnown RBP9.36□□□□□ -0.91
SPPL3-209ENST00000545209 BLMP54132 1417 aaPredicted RBP9.36□□□□□ -0.91
SPPL3-209ENST00000545209 SMG6Q86US8 1419 aaKnown RBP9.36□□□□□ -0.91
SPPL3-209ENST00000545209 DIP2AQ14689 1571 aa9.35□□□□□ -0.91
SPPL3-209ENST00000545209 ADAMTS13Q76LX8 1427 aa9.35□□□□□ -0.91
SPPL3-209ENST00000545209 RBM33Q96EV2 1170 aaKnown RBP9.35□□□□□ -0.91
SPPL3-209ENST00000545209 RIMS1Q86UR5 1692 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms