RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 ATP7BP35670 1465 aa10.43□□□□□ -0.74
CPSF7-224ENST00000544990 TNS3Q68CZ2 1445 aa10.43□□□□□ -0.74
CPSF7-224ENST00000544990 EVC2Q86UK5 1308 aa10.43□□□□□ -0.74
CPSF7-224ENST00000544990 HAX1O00165 279 aa10.43□□□□□ -0.74
CPSF7-224ENST00000544990 POTEAQ6S8J7 498 aa10.43□□□□□ -0.74
CPSF7-224ENST00000544990 NGLY1Q96IV0 654 aa10.43□□□□□ -0.74
CPSF7-224ENST00000544990 RALGAPBQ86X10 1494 aa10.42□□□□□ -0.74
CPSF7-224ENST00000544990 ARHGEF10O15013 1369 aa10.42□□□□□ -0.74
CPSF7-224ENST00000544990 AFF2P51816 1311 aa10.42□□□□□ -0.74
CPSF7-224ENST00000544990 CLCN6P51797 869 aa10.42□□□□□ -0.74
CPSF7-224ENST00000544990 FBXO22Q8NEZ5 403 aa10.42□□□□□ -0.74
CPSF7-224ENST00000544990 CCER1Q8TC90 406 aaPredicted RBP10.42□□□□□ -0.74
CPSF7-224ENST00000544990 MARF1Q9Y4F3 1742 aaKnown RBP10.41□□□□□ -0.74
CPSF7-224ENST00000544990 PLEKHG3A1L390 1219 aa10.41□□□□□ -0.74
CPSF7-224ENST00000544990 TOPAZ1Q8N9V7 1692 aa10.41□□□□□ -0.74
CPSF7-224ENST00000544990 ACEP12821 1306 aa10.4□□□□□ -0.74
CPSF7-224ENST00000544990 TRPM3Q9HCF6 1732 aaPredicted RBP10.4□□□□□ -0.74
CPSF7-224ENST00000544990 PPIP5K1Q6PFW1 1433 aa10.4□□□□□ -0.75
CPSF7-224ENST00000544990 POLR3AO14802 1390 aaPredicted RBP10.39□□□□□ -0.75
CPSF7-224ENST00000544990 RXRBP28702 533 aa10.39□□□□□ -0.75
CPSF7-224ENST00000544990 TIE1P35590 1138 aa10.39□□□□□ -0.75
CPSF7-224ENST00000544990 TPRNQ4KMQ1 711 aa10.39□□□□□ -0.75
CPSF7-224ENST00000544990 QTRT2Q9H974 415 aaKnown RBP10.39□□□□□ -0.75
CPSF7-224ENST00000544990 USP21Q9UK80 565 aa10.39□□□□□ -0.75
CPSF7-224ENST00000544990 SBNO2Q9Y2G9 1366 aa10.39□□□□□ -0.75
CPSF7-224ENST00000544990 ALS2Q96Q42 1657 aa10.38□□□□□ -0.75
CPSF7-224ENST00000544990 PPP1R37O75864 691 aa10.38□□□□□ -0.75
CPSF7-224ENST00000544990 FNBP4Q8N3X1 1017 aaPredicted RBP10.38□□□□□ -0.75
CPSF7-224ENST00000544990 CABLES1Q8TDN4 633 aa10.38□□□□□ -0.75
CPSF7-224ENST00000544990 CABP1Q9NZU7 370 aa10.38□□□□□ -0.75
CPSF7-224ENST00000544990 TRPC5Q9UL62 973 aaPredicted RBP10.37□□□□□ -0.75
CPSF7-224ENST00000544990 BRD4O60885 1362 aaPredicted RBP10.37□□□□□ -0.75
CPSF7-224ENST00000544990 ATAD2Q6PL18 1390 aa10.37□□□□□ -0.75
CPSF7-224ENST00000544990 PRKCSHP14314 528 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-224ENST00000544990 RBM6P78332 1123 aaKnown RBP10.36□□□□□ -0.75
CPSF7-224ENST00000544990 ABTB2Q8N961 1025 aa10.36□□□□□ -0.75
CPSF7-224ENST00000544990 ST20-MTHFSA0A0A6YYL1 179 aa10.35□□□□□ -0.75
CPSF7-224ENST00000544990 ABCA3Q99758 1704 aa10.35□□□□□ -0.75
CPSF7-224ENST00000544990 NLRP13Q86W25 1043 aa10.34□□□□□ -0.75
CPSF7-224ENST00000544990 UNC5CLQ8IV45 518 aa10.34□□□□□ -0.75
CPSF7-224ENST00000544990 PUS7Q96PZ0 661 aaKnown RBP10.34□□□□□ -0.75
CPSF7-224ENST00000544990 TRPC6Q9Y210 931 aa10.34□□□□□ -0.75
CPSF7-224ENST00000544990 TTLL13PA6NNM8 815 aa10.33□□□□□ -0.76
CPSF7-224ENST00000544990 NUTM2GQ5VZR2 741 aa10.33□□□□□ -0.76
CPSF7-224ENST00000544990 TMC1Q8TDI8 760 aa10.33□□□□□ -0.76
CPSF7-224ENST00000544990 BCL9LQ86UU0 1499 aa10.33□□□□□ -0.76
CPSF7-224ENST00000544990 CDK12Q9NYV4 1490 aaPredicted RBP10.33□□□□□ -0.76
CPSF7-224ENST00000544990 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.33□□□□□ -0.76
CPSF7-224ENST00000544990 NWD2Q9ULI1 1742 aa10.33□□□□□ -0.76
CPSF7-224ENST00000544990 SLIT2O94813 1529 aa10.33□□□□□ -0.76
CPSF7-224ENST00000544990 ATRNO75882 1429 aa10.33□□□□□ -0.76
CPSF7-224ENST00000544990 USP6P35125 1406 aa10.33□□□□□ -0.76
CPSF7-224ENST00000544990 AKAP12Q02952 1782 aa10.32□□□□□ -0.76
CPSF7-224ENST00000544990 USP47Q96K76 1375 aa10.32□□□□□ -0.76
CPSF7-224ENST00000544990 FAM83GA6ND36 823 aa10.32□□□□□ -0.76
CPSF7-224ENST00000544990 PDE4AP27815 886 aa10.32□□□□□ -0.76
CPSF7-224ENST00000544990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.32□□□□□ -0.764e-9■■■□□ 15.2
CPSF7-224ENST00000544990 CRYBG1Q9Y4K1 1723 aa10.32□□□□□ -0.76
CPSF7-224ENST00000544990 PLCH1Q4KWH8 1693 aa10.31□□□□□ -0.76
CPSF7-224ENST00000544990 KTN1Q86UP2 1357 aaKnown RBP10.31□□□□□ -0.76
CPSF7-224ENST00000544990 TMF1P82094 1093 aa10.31□□□□□ -0.76
CPSF7-224ENST00000544990 HDGFL2Q7Z4V5 671 aaPredicted RBP10.31□□□□□ -0.76
CPSF7-224ENST00000544990 GJD4Q96KN9 370 aaPredicted RBP10.31□□□□□ -0.76
CPSF7-224ENST00000544990 TESK2Q96S53 571 aa10.31□□□□□ -0.76
CPSF7-224ENST00000544990 PRDM11Q9NQV5 511 aa10.31□□□□□ -0.76
CPSF7-224ENST00000544990 COL14A1Q05707 1796 aaKnown RBP10.31□□□□□ -0.76
CPSF7-224ENST00000544990 TTC21AQ8NDW8 1320 aa10.31□□□□□ -0.76
CPSF7-224ENST00000544990 PHRF1Q9P1Y6 1649 aaKnown RBP10.3□□□□□ -0.76
CPSF7-224ENST00000544990 CDCA8Q53HL2 280 aa10.3□□□□□ -0.76
CPSF7-224ENST00000544990 BMP2KQ9NSY1 1161 aaPredicted RBP10.3□□□□□ -0.76
CPSF7-224ENST00000544990 BTG4Q9NY30 223 aa10.3□□□□□ -0.76
CPSF7-224ENST00000544990 TERF2IPQ9NYB0 399 aa10.3□□□□□ -0.76
CPSF7-224ENST00000544990 CCDC9Q9Y3X0 531 aaKnown RBP10.3□□□□□ -0.76
CPSF7-224ENST00000544990 CPSF1Q10570 1443 aaKnown RBP10.3□□□□□ -0.76
CPSF7-224ENST00000544990 TTC21BQ7Z4L5 1316 aa10.3□□□□□ -0.76
CPSF7-224ENST00000544990 NINLQ9Y2I6 1382 aa10.29□□□□□ -0.76
CPSF7-224ENST00000544990 GALR2O43603 387 aaPredicted RBP10.29□□□□□ -0.76
CPSF7-224ENST00000544990 GCP02774 474 aa10.29□□□□□ -0.76
CPSF7-224ENST00000544990 ZC3H6P61129 1189 aaKnown RBP10.29□□□□□ -0.76
CPSF7-224ENST00000544990 VPS72Q15906 364 aa10.29□□□□□ -0.76
CPSF7-224ENST00000544990 MS4A4AQ96JQ5 239 aa10.29□□□□□ -0.76
CPSF7-224ENST00000544990 SLC12A5Q9H2X9 1139 aa10.29□□□□□ -0.76
CPSF7-224ENST00000544990 SSH2Q76I76 1423 aa10.29□□□□□ -0.76
CPSF7-224ENST00000544990 KIAA0232Q92628 1395 aa10.28□□□□□ -0.76
CPSF7-224ENST00000544990 MON2Q7Z3U7 1717 aa10.28□□□□□ -0.76
CPSF7-224ENST00000544990 E2F4Q16254 413 aa10.28□□□□□ -0.76
CPSF7-224ENST00000544990 TRIM35Q9UPQ4 493 aa10.28□□□□□ -0.76
CPSF7-224ENST00000544990 USP19O94966 1318 aa10.28□□□□□ -0.76
CPSF7-224ENST00000544990 RGS12O14924 1447 aa10.27□□□□□ -0.77
CPSF7-224ENST00000544990 TULP1O00294 542 aaPredicted RBP10.27□□□□□ -0.77
CPSF7-224ENST00000544990 CHRNA2Q15822 529 aa10.27□□□□□ -0.77
CPSF7-224ENST00000544990 KCNH5Q8NCM2 988 aa10.27□□□□□ -0.77
CPSF7-224ENST00000544990 LARP6Q9BRS8 491 aaKnown RBP10.27□□□□□ -0.77
CPSF7-224ENST00000544990 CPDO75976 1380 aa10.26□□□□□ -0.77
CPSF7-224ENST00000544990 PIK3C2AO00443 1686 aa10.26□□□□□ -0.77
CPSF7-224ENST00000544990 EVA1CP58658 441 aa10.26□□□□□ -0.77
CPSF7-224ENST00000544990 EIF4G2P78344 907 aaKnown RBP eCLIP10.26□□□□□ -0.77
CPSF7-224ENST00000544990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.26□□□□□ -0.77
CPSF7-224ENST00000544990 KCNV2Q8TDN2 545 aa10.26□□□□□ -0.77
CPSF7-224ENST00000544990 NRAPQ86VF7 1730 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms