RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 PROM2Q8N271 834 aa13.29□□□□□ -0.28
CIT-216ENST00000544872 SBNO1A3KN83 1393 aa13.29□□□□□ -0.28
CIT-216ENST00000544872 BARGINQ6ZT62 677 aa13.28□□□□□ -0.28
CIT-216ENST00000544872 CDK19Q9BWU1 502 aa13.28□□□□□ -0.28
CIT-216ENST00000544872 PHF8Q9UPP1 1060 aa13.28□□□□□ -0.28
CIT-216ENST00000544872 ADCY9O60503 1353 aa13.28□□□□□ -0.28
CIT-216ENST00000544872 PLEKHH1Q9ULM0 1364 aa13.28□□□□□ -0.28
CIT-216ENST00000544872 KIF1AQ12756 1690 aa13.28□□□□□ -0.28
CIT-216ENST00000544872 WDR90Q96KV7 1748 aa13.27□□□□□ -0.28
CIT-216ENST00000544872 EIF4G2P78344 907 aaKnown RBP eCLIP13.27□□□□□ -0.29
CIT-216ENST00000544872 TXNRD1Q16881 649 aa13.27□□□□□ -0.29
CIT-216ENST00000544872 GPRASP1Q5JY77 1395 aa13.27□□□□□ -0.29
CIT-216ENST00000544872 IFT172Q9UG01 1749 aa13.27□□□□□ -0.29
CIT-216ENST00000544872 RGPD3A6NKT7 1758 aaPredicted RBP13.26□□□□□ -0.29
CIT-216ENST00000544872 ADGRB1O14514 1584 aa13.26□□□□□ -0.29
CIT-216ENST00000544872 TMF1P82094 1093 aa13.26□□□□□ -0.29
CIT-216ENST00000544872 RGPD4Q7Z3J3 1758 aa13.26□□□□□ -0.29
CIT-216ENST00000544872 NGDNQ8NEJ9 315 aaKnown RBP13.26□□□□□ -0.29
CIT-216ENST00000544872 CCDC61Q9Y6R9 512 aa13.26□□□□□ -0.29
CIT-216ENST00000544872 CHRNA2Q15822 529 aa13.25□□□□□ -0.29
CIT-216ENST00000544872 PMFBP1Q8TBY8 1022 aa13.25□□□□□ -0.29
CIT-216ENST00000544872 NUDT16Q96DE0 195 aaKnown RBP13.25□□□□□ -0.29
CIT-216ENST00000544872 OVOS2A0A0G2JMS6 1433 aa13.24□□□□□ -0.29
CIT-216ENST00000544872 OVOS2A0A0J9YW53 1432 aa13.24□□□□□ -0.29
CIT-216ENST00000544872 OVOS2Q6IE36 1432 aa13.24□□□□□ -0.29
CIT-216ENST00000544872 ST20-MTHFSA0A0A6YYL1 179 aa13.24□□□□□ -0.29
CIT-216ENST00000544872 TCP11L2Q8N4U5 519 aa13.24□□□□□ -0.29
CIT-216ENST00000544872 MLLT1Q03111 559 aaPredicted RBP13.23□□□□□ -0.29
CIT-216ENST00000544872 PTF1AQ7RTS3 328 aa13.23□□□□□ -0.29
CIT-216ENST00000544872 C16orf71Q8IYS4 520 aaPredicted RBP13.23□□□□□ -0.29
CIT-216ENST00000544872 KIAA1210Q9ULL0 1709 aa13.22□□□□□ -0.29
CIT-216ENST00000544872 ANKARQ7Z5J8 1434 aa13.22□□□□□ -0.29
CIT-216ENST00000544872 USP47Q96K76 1375 aa13.21□□□□□ -0.29
CIT-216ENST00000544872 PUS7Q96PZ0 661 aaKnown RBP13.21□□□□□ -0.29
CIT-216ENST00000544872 CABP2Q9NPB3 220 aa13.21□□□□□ -0.29
CIT-216ENST00000544872 TMC1Q8TDI8 760 aa13.2□□□□□ -0.3
CIT-216ENST00000544872 ZNF692Q9BU19 519 aaPredicted RBP13.2□□□□□ -0.3
CIT-216ENST00000544872 PAK3O75914 559 aaPredicted RBP13.19□□□□□ -0.3
CIT-216ENST00000544872 HDGFL2Q7Z4V5 671 aaPredicted RBP13.19□□□□□ -0.3
CIT-216ENST00000544872 TERF2IPQ9NYB0 399 aa13.19□□□□□ -0.3
CIT-216ENST00000544872 RBM46Q8TBY0 533 aaKnown RBP13.18□□□□□ -0.3
CIT-216ENST00000544872 KIAA0232Q92628 1395 aa13.18□□□□□ -0.3
CIT-216ENST00000544872 SBNO2Q9Y2G9 1366 aa13.18□□□□□ -0.3
CIT-216ENST00000544872 USP19O94966 1318 aa13.17□□□□□ -0.3
CIT-216ENST00000544872 PLEKHG3A1L390 1219 aa13.17□□□□□ -0.3
CIT-216ENST00000544872 LARP1Q6PKG0 1096 aaKnown RBP13.17□□□□□ -0.3
CIT-216ENST00000544872 SLC16A10Q8TF71 515 aa13.17□□□□□ -0.3
CIT-216ENST00000544872 CABP1Q9NZU7 370 aa13.17□□□□□ -0.3
CIT-216ENST00000544872 PCNTO95613 3336 aa13.16□□□□□ -0.3
CIT-216ENST00000544872 KNDC1Q76NI1 1749 aa13.16□□□□□ -0.3
CIT-216ENST00000544872 SSH2Q76I76 1423 aa13.16□□□□□ -0.3
CIT-216ENST00000544872 ZC3H6P61129 1189 aaKnown RBP13.16□□□□□ -0.3
CIT-216ENST00000544872 POLR3GLQ9BT43 218 aa13.16□□□□□ -0.3
CIT-216ENST00000544872 THRAP3Q9Y2W1 955 aaKnown RBP13.16□□□□□ -0.3
CIT-216ENST00000544872 TRPM1Q7Z4N2 1603 aa13.15□□□□□ -0.3
CIT-216ENST00000544872 HSPA5P11021 654 aaKnown RBP13.15□□□□□ -0.3
CIT-216ENST00000544872 FSTL1Q12841 308 aa13.14□□□□□ -0.31
CIT-216ENST00000544872 DDB1Q16531 1140 aa13.14□□□□□ -0.31
CIT-216ENST00000544872 NMRK2Q9NPI5 230 aa13.14□□□□□ -0.31
CIT-216ENST00000544872 ACEP12821 1306 aa13.13□□□□□ -0.31
CIT-216ENST00000544872 TULP4Q9NRJ4 1543 aa13.13□□□□□ -0.31
CIT-216ENST00000544872 TESK2Q96S53 571 aa13.13□□□□□ -0.31
CIT-216ENST00000544872 FMN2Q9NZ56 1722 aa13.13□□□□□ -0.31
CIT-216ENST00000544872 TOPAZ1Q8N9V7 1692 aa13.12□□□□□ -0.31
CIT-216ENST00000544872 BRD4O60885 1362 aaPredicted RBP13.12□□□□□ -0.31
CIT-216ENST00000544872 PPIP5K1Q6PFW1 1433 aa13.12□□□□□ -0.31
CIT-216ENST00000544872 PRR36Q9H6K5 1346 aa13.12□□□□□ -0.31
CIT-216ENST00000544872 SBF2Q86WG5 1849 aa13.11□□□□□ -0.31
CIT-216ENST00000544872 ZNF827Q17R98 1081 aa13.11□□□□□ -0.31
CIT-216ENST00000544872 ABTB2Q8N961 1025 aa13.11□□□□□ -0.31
CIT-216ENST00000544872 NLRP13Q86W25 1043 aa13.1□□□□□ -0.31
CIT-216ENST00000544872 ABHD8Q96I13 439 aa13.1□□□□□ -0.31
CIT-216ENST00000544872 CCDC85CA6NKD9 419 aa13.09□□□□□ -0.31
CIT-216ENST00000544872 MSH5O43196 834 aa13.09□□□□□ -0.31
CIT-216ENST00000544872 ARHGEF28Q8N1W1 1705 aaKnown RBP13.09□□□□□ -0.31
CIT-216ENST00000544872 RGPD8O14715 1765 aaPredicted RBP13.09□□□□□ -0.31
CIT-216ENST00000544872 ATP7BP35670 1465 aa13.09□□□□□ -0.31
CIT-216ENST00000544872 PEAK1Q9H792 1746 aa13.08□□□□□ -0.32
CIT-216ENST00000544872 SLC12A5Q9H2X9 1139 aa13.08□□□□□ -0.32
CIT-216ENST00000544872 PARP4Q9UKK3 1724 aaKnown RBP13.08□□□□□ -0.32
CIT-216ENST00000544872 KTN1Q86UP2 1357 aaKnown RBP13.07□□□□□ -0.32
CIT-216ENST00000544872 PRDM10Q9NQV6 1147 aa13.07□□□□□ -0.32
CIT-216ENST00000544872 TFCP2L1Q9NZI6 479 aa13.07□□□□□ -0.32
CIT-216ENST00000544872 POLR3AO14802 1390 aaPredicted RBP13.07□□□□□ -0.32
CIT-216ENST00000544872 NLRP6P59044 892 aa13.06□□□□□ -0.32
CIT-216ENST00000544872 TTC21AQ8NDW8 1320 aa13.06□□□□□ -0.32
CIT-216ENST00000544872 MARCH10Q8NA82 808 aaPredicted RBP13.05□□□□□ -0.32
CIT-216ENST00000544872 FOXN1O15353 648 aa13.04□□□□□ -0.32
CIT-216ENST00000544872 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.04□□□□□ -0.32
CIT-216ENST00000544872 KCNH5Q8NCM2 988 aa13.04□□□□□ -0.32
CIT-216ENST00000544872 CFAP44Q96MT7 982 aa13.04□□□□□ -0.32
CIT-216ENST00000544872 CD2APQ9Y5K6 639 aa13.04□□□□□ -0.32
CIT-216ENST00000544872 PNPLA7Q6ZV29 1317 aa13.04□□□□□ -0.32
CIT-216ENST00000544872 ALS2Q96Q42 1657 aa13.03□□□□□ -0.32
CIT-216ENST00000544872 NUTM2GQ5VZR2 741 aa13.03□□□□□ -0.32
CIT-216ENST00000544872 SMC1BQ8NDV3 1235 aa13.03□□□□□ -0.32
CIT-216ENST00000544872 AIDAQ96BJ3 306 aa13.03□□□□□ -0.32
CIT-216ENST00000544872 TTC21BQ7Z4L5 1316 aa13.03□□□□□ -0.32
CIT-216ENST00000544872 QRICH2Q9H0J4 1663 aa13.02□□□□□ -0.32
CIT-216ENST00000544872 MSL1Q68DK7 614 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms