RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 NPC1L1Q9UHC9 1359 aa16.2■□□□□ 0.18
PCMTD1-208ENST00000544451 BAG4O95429 457 aaKnown RBP16.19■□□□□ 0.18
PCMTD1-208ENST00000544451 CROCC2H7BZ55 1655 aa16.19■□□□□ 0.18
PCMTD1-208ENST00000544451 RABEP1Q15276 862 aa16.19■□□□□ 0.18
PCMTD1-208ENST00000544451 ZGPATQ8N5A5 531 aaKnown RBP16.19■□□□□ 0.18
PCMTD1-208ENST00000544451 VAMP4O75379 141 aa16.18■□□□□ 0.18
PCMTD1-208ENST00000544451 POLKQ9UBT6 870 aa16.18■□□□□ 0.18
PCMTD1-208ENST00000544451 ANKRD36BQ8N2N9 1353 aa16.18■□□□□ 0.18
PCMTD1-208ENST00000544451 HAP1P54257 671 aaPredicted RBP16.18■□□□□ 0.18
PCMTD1-208ENST00000544451 XPCQ01831 940 aaPredicted RBP16.18■□□□□ 0.18
PCMTD1-208ENST00000544451 DDX54Q8TDD1 881 aaKnown RBP16.18■□□□□ 0.18
PCMTD1-208ENST00000544451 MEIS3Q99687 375 aa16.17■□□□□ 0.18
PCMTD1-208ENST00000544451 ALDH1L2Q3SY69 923 aa16.17■□□□□ 0.18
PCMTD1-208ENST00000544451 ZBTB7BO15156 539 aaPredicted RBP16.16■□□□□ 0.18
PCMTD1-208ENST00000544451 PKP1Q13835 747 aa16.16■□□□□ 0.18
PCMTD1-208ENST00000544451 MRPL50Q8N5N7 158 aaKnown RBP16.16■□□□□ 0.18
PCMTD1-208ENST00000544451 ERCC6L2Q5T890 1561 aa16.15■□□□□ 0.18
PCMTD1-208ENST00000544451 CIZ1Q9ULV3 898 aaPredicted RBP16.15■□□□□ 0.18
PCMTD1-208ENST00000544451 SDSP20132 328 aa16.15■□□□□ 0.18
PCMTD1-208ENST00000544451 RPGRIP1LQ68CZ1 1315 aa16.14■□□□□ 0.17
PCMTD1-208ENST00000544451 CLCN1P35523 988 aa16.14■□□□□ 0.17
PCMTD1-208ENST00000544451 DRC7Q8IY82 874 aa16.14■□□□□ 0.17
PCMTD1-208ENST00000544451 GOLGA6L4A6NEF3 574 aa16.14■□□□□ 0.17
PCMTD1-208ENST00000544451 FGD1P98174 961 aa16.14■□□□□ 0.17
PCMTD1-208ENST00000544451 CCDC173Q0VFZ6 552 aa16.14■□□□□ 0.17
PCMTD1-208ENST00000544451 CFAP44Q96MT7 982 aa16.13■□□□□ 0.17
PCMTD1-208ENST00000544451 RTEL1-TNFRSF6BF6WH68 1400 aa16.13■□□□□ 0.17
PCMTD1-208ENST00000544451 KIAA2012Q0VF49 1180 aa16.13■□□□□ 0.17
PCMTD1-208ENST00000544451 RAB3GAP1Q15042 981 aa16.13■□□□□ 0.17
PCMTD1-208ENST00000544451 NUDT16Q96DE0 195 aaKnown RBP16.13■□□□□ 0.17
PCMTD1-208ENST00000544451 ERC2O15083 957 aa16.13■□□□□ 0.17
PCMTD1-208ENST00000544451 CDC42BPBQ9Y5S2 1711 aa16.12■□□□□ 0.17
PCMTD1-208ENST00000544451 NUTM1Q86Y26 1132 aa16.12■□□□□ 0.17
PCMTD1-208ENST00000544451 SLC52A1Q9NWF4 448 aa16.12■□□□□ 0.17
PCMTD1-208ENST00000544451 ABCC11Q96J66 1382 aa16.12■□□□□ 0.17
PCMTD1-208ENST00000544451 SURF6O75683 361 aaKnown RBP16.12■□□□□ 0.17
PCMTD1-208ENST00000544451 SLC26A8Q96RN1 970 aa16.12■□□□□ 0.17
PCMTD1-208ENST00000544451 VPS37CA5D8V6 355 aaPredicted RBP16.12■□□□□ 0.17
PCMTD1-208ENST00000544451 FIBPO43427 364 aa16.12■□□□□ 0.17
PCMTD1-208ENST00000544451 KDM5AP29375 1690 aaKnown RBP16.11■□□□□ 0.17
PCMTD1-208ENST00000544451 IFT57Q9NWB7 429 aa16.11■□□□□ 0.17
PCMTD1-208ENST00000544451 ABCC2Q92887 1545 aa16.11■□□□□ 0.17
PCMTD1-208ENST00000544451 PLEKHM2Q8IWE5 1019 aa16.11■□□□□ 0.17
PCMTD1-208ENST00000544451 FOXO3O43524 673 aa16.1■□□□□ 0.17
PCMTD1-208ENST00000544451 SYAP1Q96A49 352 aaPredicted RBP16.1■□□□□ 0.17
PCMTD1-208ENST00000544451 PLEKHF1Q96S99 279 aa16.1■□□□□ 0.17
PCMTD1-208ENST00000544451 CD109Q6YHK3 1445 aa16.1■□□□□ 0.17
PCMTD1-208ENST00000544451 PREX2Q70Z35 1606 aa16.1■□□□□ 0.17
PCMTD1-208ENST00000544451 SYNMO15061 1565 aa16.1■□□□□ 0.17
PCMTD1-208ENST00000544451 FAM69CQ0P6D2 419 aa16.1■□□□□ 0.17
PCMTD1-208ENST00000544451 HSP90AB2PQ58FF8 381 aa16.1■□□□□ 0.17
PCMTD1-208ENST00000544451 TTC22Q5TAA0 569 aa16.1■□□□□ 0.17
PCMTD1-208ENST00000544451 RBM25P49756 843 aaKnown RBP16.1■□□□□ 0.17
PCMTD1-208ENST00000544451 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
PCMTD1-208ENST00000544451 PRIM1P49642 420 aaKnown RBP16.09■□□□□ 0.17
PCMTD1-208ENST00000544451 ZSCAN30Q86W11 494 aa16.09■□□□□ 0.17
PCMTD1-208ENST00000544451 ZSCAN23Q3MJ62 389 aa16.09■□□□□ 0.17
PCMTD1-208ENST00000544451 UBE2Q2Q8WVN8 375 aa16.09■□□□□ 0.17
PCMTD1-208ENST00000544451 FOSBP53539 338 aa16.08■□□□□ 0.17
PCMTD1-208ENST00000544451 SNX21Q969T3 373 aa16.08■□□□□ 0.17
PCMTD1-208ENST00000544451 GSPT1P15170 499 aaKnown RBP16.08■□□□□ 0.16
PCMTD1-208ENST00000544451 GNAI2P04899 355 aa16.08■□□□□ 0.16
PCMTD1-208ENST00000544451 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.07■□□□□ 0.16
PCMTD1-208ENST00000544451 IL16Q14005 1332 aa16.07■□□□□ 0.16
PCMTD1-208ENST00000544451 UBTFL1P0CB47 393 aaPredicted RBP16.07■□□□□ 0.16
PCMTD1-208ENST00000544451 NLRP6P59044 892 aa16.07■□□□□ 0.16
PCMTD1-208ENST00000544451 SIRT2Q8IXJ6 389 aa16.07■□□□□ 0.16
PCMTD1-208ENST00000544451 ZNF830Q96NB3 372 aaPredicted RBP16.07■□□□□ 0.16
PCMTD1-208ENST00000544451 CCDC61Q9Y6R9 512 aa16.07■□□□□ 0.16
PCMTD1-208ENST00000544451 KLHL40Q2TBA0 621 aa16.06■□□□□ 0.16
PCMTD1-208ENST00000544451 LRRCC1Q9C099 1032 aa16.06■□□□□ 0.16
PCMTD1-208ENST00000544451 ERBB4Q15303 1308 aa16.06■□□□□ 0.16
PCMTD1-208ENST00000544451 G2E3Q7L622 706 aa16.06■□□□□ 0.16
PCMTD1-208ENST00000544451 RPAP2Q8IXW5 612 aaPredicted RBP16.06■□□□□ 0.16
PCMTD1-208ENST00000544451 USHBP1Q8N6Y0 703 aa16.06■□□□□ 0.16
PCMTD1-208ENST00000544451 E9PCH4 1651 aa16.05■□□□□ 0.16
PCMTD1-208ENST00000544451 FSD2A1L4K1 749 aa16.05■□□□□ 0.16
PCMTD1-208ENST00000544451 SPC24Q8NBT2 197 aa16.05■□□□□ 0.16
PCMTD1-208ENST00000544451 DIAPH3Q9NSV4 1193 aa16.05■□□□□ 0.16
PCMTD1-208ENST00000544451 MYO5CQ9NQX4 1742 aa16.05■□□□□ 0.16
PCMTD1-208ENST00000544451 CLTCL1P53675 1640 aa16.05■□□□□ 0.16
PCMTD1-208ENST00000544451 ASXL2Q76L83 1435 aa16.05■□□□□ 0.16
PCMTD1-208ENST00000544451 ZNF518AQ6AHZ1 1483 aa16.05■□□□□ 0.16
PCMTD1-208ENST00000544451 FBXW7Q969H0 707 aa16.05■□□□□ 0.16
PCMTD1-208ENST00000544451 RBM33Q96EV2 1170 aaKnown RBP16.05■□□□□ 0.16
PCMTD1-208ENST00000544451 ATP7AQ04656 1500 aa16.05■□□□□ 0.16
PCMTD1-208ENST00000544451 ANXA1P04083 346 aa16.05■□□□□ 0.16
PCMTD1-208ENST00000544451 CWC27Q6UX04 472 aaKnown RBP16.05■□□□□ 0.16
PCMTD1-208ENST00000544451 NSD2O96028 1365 aa16.04■□□□□ 0.16
PCMTD1-208ENST00000544451 HDGFP51858 240 aaKnown RBP16.04■□□□□ 0.16
PCMTD1-208ENST00000544451 AIMP1Q12904 312 aaKnown RBP16.04■□□□□ 0.16
PCMTD1-208ENST00000544451 UQCRHLA0A096LP55 91 aa16.04■□□□□ 0.16
PCMTD1-208ENST00000544451 UQCRHP07919 91 aa16.04■□□□□ 0.16
PCMTD1-208ENST00000544451 NPATQ14207 1427 aa16.04■□□□□ 0.16
PCMTD1-208ENST00000544451 RBSNQ9H1K0 784 aa16.04■□□□□ 0.16
PCMTD1-208ENST00000544451 SMC3Q9UQE7 1217 aa16.04■□□□□ 0.16
PCMTD1-208ENST00000544451 IQGAP3Q86VI3 1631 aa16.03■□□□□ 0.16
PCMTD1-208ENST00000544451 WASLO00401 505 aaPredicted RBP16.03■□□□□ 0.16
PCMTD1-208ENST00000544451 TMX3Q96JJ7 454 aa16.03■□□□□ 0.16
PCMTD1-208ENST00000544451 USP26Q9BXU7 913 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms