RNA–Protein interactions for RNA: ENST00000544254.1

PSMD9-210, Transcript of proteasome 26S subunit, non-ATPase 9, humanhuman

TSL 2

Gene PSMD9, Length 1,481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9-210ENST00000544254 AMPHP49418 695 aa16.75■□□□□ 0.27
PSMD9-210ENST00000544254 C1orf167Q5SNV9 1468 aa16.75■□□□□ 0.27
PSMD9-210ENST00000544254 KDM4FA0A1W2PPD8 638 aa16.74■□□□□ 0.27
PSMD9-210ENST00000544254 HMOX1P09601 288 aa16.74■□□□□ 0.27
PSMD9-210ENST00000544254 B4GALNT3Q6L9W6 998 aa16.74■□□□□ 0.27
PSMD9-210ENST00000544254 KCNH5Q8NCM2 988 aa16.74■□□□□ 0.27
PSMD9-210ENST00000544254 TMEM94Q12767 1356 aa16.74■□□□□ 0.27
PSMD9-210ENST00000544254 ATF3P18847 181 aa16.73■□□□□ 0.27
PSMD9-210ENST00000544254 EXOC6Q8TAG9 804 aa16.73■□□□□ 0.27
PSMD9-210ENST00000544254 RBM33Q96EV2 1170 aaKnown RBP16.73■□□□□ 0.27
PSMD9-210ENST00000544254 MST1RQ04912 1400 aa16.73■□□□□ 0.27
PSMD9-210ENST00000544254 HSP90AB2PQ58FF8 381 aa16.73■□□□□ 0.27
PSMD9-210ENST00000544254 FANCIQ9NVI1 1328 aa16.72■□□□□ 0.27
PSMD9-210ENST00000544254 PDE3AQ14432 1141 aa16.72■□□□□ 0.27
PSMD9-210ENST00000544254 CADPS2Q86UW7 1296 aa16.72■□□□□ 0.27
PSMD9-210ENST00000544254 PHRF1Q9P1Y6 1649 aaKnown RBP16.71■□□□□ 0.27
PSMD9-210ENST00000544254 PLIN1O60240 522 aa16.71■□□□□ 0.27
PSMD9-210ENST00000544254 PHACTR3Q96KR7 559 aa16.71■□□□□ 0.27
PSMD9-210ENST00000544254 STRCP1A6NGW2 1772 aa16.71■□□□□ 0.27
PSMD9-210ENST00000544254 KDRP35968 1356 aa16.7■□□□□ 0.26
PSMD9-210ENST00000544254 NFAT5O94916 1531 aa16.7■□□□□ 0.26
PSMD9-210ENST00000544254 RARSP54136 660 aaKnown RBP16.7■□□□□ 0.26
PSMD9-210ENST00000544254 HSPA2P54652 639 aa16.7■□□□□ 0.26
PSMD9-210ENST00000544254 GNAI1P63096 354 aa16.7■□□□□ 0.26
PSMD9-210ENST00000544254 SULT6B1Q6IMI4 303 aa16.7■□□□□ 0.26
PSMD9-210ENST00000544254 ZNF428Q96B54 188 aa16.7■□□□□ 0.26
PSMD9-210ENST00000544254 MSH6P52701 1360 aa16.7■□□□□ 0.26
PSMD9-210ENST00000544254 TRPM3Q9HCF6 1732 aaPredicted RBP16.69■□□□□ 0.26
PSMD9-210ENST00000544254 IGSF1Q8N6C5 1336 aa16.69■□□□□ 0.26
PSMD9-210ENST00000544254 SOX12O15370 315 aa16.69■□□□□ 0.26
PSMD9-210ENST00000544254 HOXC9P31274 260 aa16.69■□□□□ 0.26
PSMD9-210ENST00000544254 AAMPQ13685 434 aa16.69■□□□□ 0.26
PSMD9-210ENST00000544254 ORAI2Q96SN7 254 aa16.69■□□□□ 0.26
PSMD9-210ENST00000544254 CRBNQ96SW2 442 aa16.69■□□□□ 0.26
PSMD9-210ENST00000544254 IFT57Q9NWB7 429 aa16.69■□□□□ 0.26
PSMD9-210ENST00000544254 SLIT3O75094 1523 aa16.69■□□□□ 0.26
PSMD9-210ENST00000544254 STRCQ7RTU9 1775 aa16.68■□□□□ 0.26
PSMD9-210ENST00000544254 MS4A1P11836 297 aa16.68■□□□□ 0.26
PSMD9-210ENST00000544254 BCAR3O75815 825 aa16.67■□□□□ 0.26
PSMD9-210ENST00000544254 CANXP27824 592 aaKnown RBP16.67■□□□□ 0.26
PSMD9-210ENST00000544254 NUTM2GQ5VZR2 741 aa16.67■□□□□ 0.26
PSMD9-210ENST00000544254 KRT28Q7Z3Y7 464 aa16.67■□□□□ 0.26
PSMD9-210ENST00000544254 LTN1O94822 1766 aa16.67■□□□□ 0.26
PSMD9-210ENST00000544254 FOXO3O43524 673 aa16.66■□□□□ 0.26
PSMD9-210ENST00000544254 IP6K1Q92551 441 aa16.66■□□□□ 0.26
PSMD9-210ENST00000544254 USP19O94966 1318 aa16.65■□□□□ 0.26
PSMD9-210ENST00000544254 DLG5Q8TDM6 1919 aa16.65■□□□□ 0.26
PSMD9-210ENST00000544254 EXOSC9Q06265 439 aaKnown RBP16.65■□□□□ 0.26
PSMD9-210ENST00000544254 ZNF853P0CG23 659 aa16.64■□□□□ 0.25
PSMD9-210ENST00000544254 ALDH1L2Q3SY69 923 aa16.64■□□□□ 0.25
PSMD9-210ENST00000544254 C20orf194Q5TEA3 1177 aa16.64■□□□□ 0.25
PSMD9-210ENST00000544254 AEBP1Q8IUX7 1158 aa16.64■□□□□ 0.25
PSMD9-210ENST00000544254 GAS2L2Q8NHY3 880 aa16.64■□□□□ 0.25
PSMD9-210ENST00000544254 TSR2Q969E8 191 aaKnown RBP16.64■□□□□ 0.25
PSMD9-210ENST00000544254 CFAP44Q96MT7 982 aa16.64■□□□□ 0.25
PSMD9-210ENST00000544254 NPHP3Q7Z494 1330 aa16.64■□□□□ 0.25
PSMD9-210ENST00000544254 HTATSF1O43719 755 aaKnown RBP16.63■□□□□ 0.25
PSMD9-210ENST00000544254 HAP1P54257 671 aaPredicted RBP16.63■□□□□ 0.25
PSMD9-210ENST00000544254 EYA1Q99502 592 aa16.63■□□□□ 0.25
PSMD9-210ENST00000544254 ALS2Q96Q42 1657 aa16.63■□□□□ 0.25
PSMD9-210ENST00000544254 KIF16BQ96L93 1317 aa16.61■□□□□ 0.25
PSMD9-210ENST00000544254 GCP02774 474 aa16.61■□□□□ 0.25
PSMD9-210ENST00000544254 BRPF1P55201 1214 aaPredicted RBP16.61■□□□□ 0.25
PSMD9-210ENST00000544254 ZKSCAN2Q63HK3 967 aa16.61■□□□□ 0.25
PSMD9-210ENST00000544254 TSHZ2Q9NRE2 1034 aa16.61■□□□□ 0.25
PSMD9-210ENST00000544254 IPO8O15397 1037 aaKnown RBP16.6■□□□□ 0.25
PSMD9-210ENST00000544254 SMC4Q9NTJ3 1288 aa16.6■□□□□ 0.25
PSMD9-210ENST00000544254 XIRP1Q702N8 1843 aaKnown RBP16.6■□□□□ 0.25
PSMD9-210ENST00000544254 ARHGEF25Q86VW2 580 aa16.59■□□□□ 0.25
PSMD9-210ENST00000544254 RTF1Q92541 710 aaKnown RBP16.59■□□□□ 0.25
PSMD9-210ENST00000544254 FRAT1Q92837 279 aaPredicted RBP16.59■□□□□ 0.25
PSMD9-210ENST00000544254 LAS1LQ9Y4W2 734 aaKnown RBP16.59■□□□□ 0.25
PSMD9-210ENST00000544254 ABCC6O95255 1503 aa16.59■□□□□ 0.25
PSMD9-210ENST00000544254 TNS3Q68CZ2 1445 aa16.57■□□□□ 0.24
PSMD9-210ENST00000544254 LMOD2Q6P5Q4 547 aa16.57■□□□□ 0.24
PSMD9-210ENST00000544254 CENPQQ7L2Z9 268 aaPredicted RBP16.57■□□□□ 0.24
PSMD9-210ENST00000544254 MBIPQ9NS73 344 aa16.57■□□□□ 0.24
PSMD9-210ENST00000544254 XPCQ01831 940 aaPredicted RBP16.56■□□□□ 0.24
PSMD9-210ENST00000544254 MTHFSDQ2M296 383 aaKnown RBP16.56■□□□□ 0.24
PSMD9-210ENST00000544254 SSH1Q8WYL5 1049 aa16.56■□□□□ 0.24
PSMD9-210ENST00000544254 PXDNQ92626 1479 aa16.56■□□□□ 0.24
PSMD9-210ENST00000544254 THUMPD2Q9BTF0 503 aaKnown RBP16.55■□□□□ 0.24
PSMD9-210ENST00000544254 KIAA0232Q92628 1395 aa16.55■□□□□ 0.24
PSMD9-210ENST00000544254 NCAPD2Q15021 1401 aa16.55■□□□□ 0.24
PSMD9-210ENST00000544254 MED1Q15648 1581 aaPredicted RBP16.55■□□□□ 0.24
PSMD9-210ENST00000544254 CHL1O00533 1208 aa16.54■□□□□ 0.24
PSMD9-210ENST00000544254 FTSJ3Q8IY81 847 aaKnown RBP16.54■□□□□ 0.24
PSMD9-210ENST00000544254 DZIP1LQ8IYY4 767 aaKnown RBP16.54■□□□□ 0.24
PSMD9-210ENST00000544254 BABAM1Q9NWV8 329 aa16.54■□□□□ 0.24
PSMD9-210ENST00000544254 FAM83GA6ND36 823 aa16.54■□□□□ 0.24
PSMD9-210ENST00000544254 VAMP4O75379 141 aa16.54■□□□□ 0.24
PSMD9-210ENST00000544254 ATF7IPQ6VMQ6 1270 aa16.54■□□□□ 0.24
PSMD9-210ENST00000544254 ARHGAP45Q92619 1136 aa16.54■□□□□ 0.24
PSMD9-210ENST00000544254 CLUAP1Q96AJ1 413 aa16.54■□□□□ 0.24
PSMD9-210ENST00000544254 LTV1Q96GA3 475 aaPredicted RBP16.54■□□□□ 0.24
PSMD9-210ENST00000544254 CRB1P82279 1406 aa16.54■□□□□ 0.24
PSMD9-210ENST00000544254 LRRC37A3O60309 1634 aa16.54■□□□□ 0.24
PSMD9-210ENST00000544254 CAMTA1Q9Y6Y1 1673 aa16.54■□□□□ 0.24
PSMD9-210ENST00000544254 MAP3K5Q99683 1374 aa16.53■□□□□ 0.24
PSMD9-210ENST00000544254 PLEKHG2Q9H7P9 1386 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms